EWM23161.1, cds7520 (CDS) Nannochloropsis gaditana

Overview
NameEWM23161.1
Unique Namecds7520
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:192402..192493 -
Alignment locationCM002472.1:192051..192206 -
Alignment locationCM002472.1:191851..191989 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23161.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100043g26.7244.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:192402..192493 -
CM002472.1supercontigCM002472.1:192051..192206 -
CM002472.1supercontigCM002472.1:191851..191989 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23161.1 vs. NCBI_GenBank
Match: gi|585104042|gb|EWM23161.1| (hypothetical protein Naga_100043g26 [Nannochloropsis gaditana])

HSP 1 Score: 268.47 bits (685), Expect = 3.223e-91
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 
Query:    1 MLIRPRLELPVKSRHNMERGYFTHHTSSVYVQRLGCNKPLSCLRNLNLPFDVSWLLVKRADTGWREGGREVIILTWFSMPFPPKEIADFQWFDTRRSTGKGFFLVFVNDAAINFTFYLSESYHLKRNK 128
            MLIRPRLELPVKSRHNMERGYFTHHTSSVYVQRLGCNKPLSCLRNLNLPFDVSWLLVKRADTGWREGGREVIILTWFSMPFPPKEIADFQWFDTRRSTGKGFFLVFVNDAAINFTFYLSESYHLKRNK
Sbjct:    1 MLIRPRLELPVKSRHNMERGYFTHHTSSVYVQRLGCNKPLSCLRNLNLPFDVSWLLVKRADTGWREGGREVIILTWFSMPFPPKEIADFQWFDTRRSTGKGFFLVFVNDAAINFTFYLSESYHLKRNK 128
The following BLAST results are available for this feature:
BLAST of EWM23161.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104042|gb|EWM23161.1|3.223e-91100.00hypothetical protein Naga_100043g26 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7538rna7538Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications