EWM23180.1, cds7496 (CDS) Nannochloropsis gaditana

Overview
NameEWM23180.1
Unique Namecds7496
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:136365..136418 +
Alignment locationCM002472.1:136871..137080 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23180.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100484g3.2350.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:136365..136418 +
CM002472.1supercontigCM002472.1:136871..137080 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23180.1 vs. NCBI_GenBank
Match: gi|553184401|ref|XP_005854082.1| (hypothetical protein NGA_0266502 [Nannochloropsis gaditana CCMP526] >gi|422294977|gb|EKU22276.1| hypothetical protein NGA_0266502 [Nannochloropsis gaditana CCMP526] >gi|585104062|gb|EWM23180.1| hypothetical protein Naga_100484g3 [Nannochloropsis gaditana])

HSP 1 Score: 179.104 bits (453), Expect = 4.344e-57
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 
Query:    1 MESVKAAASFAASNLTKPSYYKQQFEGFAKYYYWKYIRPGSIKPLAHLMVLTGCVGYAVEWYALGQHHVAHKKAIVDKALAEHGHGH 87
            MESVKAAASFAASNLTKPSYYKQQFEGFAKYYYWKYIRPGSIKPLAHLMVLTGCVGYAVEWYALGQHHVAHKKAIVDKALAEHGHGH
Sbjct:    1 MESVKAAASFAASNLTKPSYYKQQFEGFAKYYYWKYIRPGSIKPLAHLMVLTGCVGYAVEWYALGQHHVAHKKAIVDKALAEHGHGH 87
The following BLAST results are available for this feature:
BLAST of EWM23180.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|553184401|ref|XP_005854082.1|4.344e-57100.00hypothetical protein NGA_0266502 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7514rna7514Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications