EWM23182.1, cds7491 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23182.1 vs. NCBI_GenBank
Match: gi|585104065|gb|EWM23182.1| (vacuolar protein sorting-associated protein 29 [Nannochloropsis gaditana]) HSP 1 Score: 393.66 bits (1010), Expect = 1.428e-138 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 Query: 1 MAEFGELVLVLGDLHIPHRAAAIPEKFNCMLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEACPSSLPASAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGGALVPEPGQHLGSILEPGGGGGGGGERRCPASFCWQCRGPRSCATCTRRRSRVPWT 194 MAEFGELVLVLGDLHIPHRAAAIPEKFNCMLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEACPSSLPASAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGGALVPEPGQHLGSILEPGGGGGGGGERRCPASFCWQCRGPRSCATCTRRRSRVPWT Sbjct: 1 MAEFGELVLVLGDLHIPHRAAAIPEKFNCMLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEACPSSLPASAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGGALVPEPGQHLGSILEPGGGGGGGGERRCPASFCWQCRGPRSCATCTRRRSRVPWT 194
BLAST of EWM23182.1 vs. NCBI_GenBank
Match: gi|553184405|ref|XP_005854083.1| (vacuolar protein sorting-associated protein 29, partial [Nannochloropsis gaditana CCMP526] >gi|422294978|gb|EKU22277.1| vacuolar protein sorting-associated protein 29, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 278.1 bits (710), Expect = 1.651e-93 Identity = 140/151 (92.72%), Postives = 141/151 (93.38%), Query Frame = 0 Query: 1 MAEFGELVLVLGDLHIPHRAAAIPEKFNCMLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEACPSSLPASAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGGALVPEPGQHLGS 151 MAEFGELVLVLGDLHIPHRAAAIPEKF MLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEACPSSLPASAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGG PG G+ Sbjct: 1 MAEFGELVLVLGDLHIPHRAAAIPEKFKRMLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEACPSSLPASAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGGRWFLNPGSISGA 151
BLAST of EWM23182.1 vs. NCBI_GenBank
Match: gi|1173948559|gb|OQR96672.1| (vacuolar protein sorting-associated protein 29-like [Thraustotheca clavata]) HSP 1 Score: 197.978 bits (502), Expect = 2.803e-61 Identity = 91/150 (60.67%), Postives = 113/150 (75.33%), Query Frame = 0 Query: 2 AEFGELVLVLGDLHIPHRAAAIPEKFNCMLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEACPSSLPASAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGGALVPEPGQHLGS 151 A+FGELVLV+GDLHIPHRA IPEKF MLVPNKMQHV+CTGNLV+ EQ +EL+ LAPNVHVVRGD DE S FPD KV+TIG+ R+G+CHGHQ++PWG+ +L L R+L+VD+LITGHTH+ ++ + G PG G+ Sbjct: 3 ADFGELVLVVGDLHIPHRALDIPEKFKKMLVPNKMQHVVCTGNLVTKEQFDELRDLAPNVHVVRGDFDEV------ESTTFPDKKVITIGQFRIGICHGHQIVPWGDVDSLAALQRKLNVDILITGHTHEYKLHTQNGKWFVNPGSITGA 146
BLAST of EWM23182.1 vs. NCBI_GenBank
Match: gi|698795794|ref|XP_009830926.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574114502|gb|ETV79990.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 195.282 bits (495), Expect = 2.603e-60 Identity = 95/189 (50.26%), Postives = 121/189 (64.02%), Query Frame = 0 Query: 1 MAEFGELVLVLGDLHIPHRAAAIPEKFNCMLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEACPSSLPASAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGGALVPEPGQHLGSILEPGGGGGGGGERRCPASFCWQCRGPRSCATCTRRRS 189 MA+FGELVLVLGD+HIPHRA IPEKF MLVPNKMQHVLCTGN+V+ EQ +EL+ LAPNVH+VRGD DE S+ +PD KV+TIG+ R+GLCHGHQ++PWG+ L L R+L+VD+LITGHTH+ + + G PG G + P+ +GP+ A + Sbjct: 1 MADFGELVLVLGDMHIPHRAVDIPEKFKKMLVPNKMQHVLCTGNMVTKEQYDELRGLAPNVHIVRGDFDE--------SSNYPDKKVITIGQFRIGLCHGHQIVPWGDVDCLAALQRKLNVDILITGHTHQYNLHVQHGKWFVNPG-------SITGAYSTCTQDVVPSFILMAIQGPKVVAYVYELKD 174
BLAST of EWM23182.1 vs. NCBI_GenBank
Match: gi|1173936854|gb|OQR87731.1| (membrane coat complex retromer, subunit VPS29/PEP11 [Achlya hypogyna]) HSP 1 Score: 195.282 bits (495), Expect = 2.848e-60 Identity = 88/150 (58.67%), Postives = 113/150 (75.33%), Query Frame = 0 Query: 2 AEFGELVLVLGDLHIPHRAAAIPEKFNCMLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEACPSSLPASAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGGALVPEPGQHLGS 151 A+FGELVL++GD HIPHRA +PEKF MLVPNKMQHVLCTGNLV+ EQ +EL+ LAPNVHVVRGD DE + FPD KV+TIG+ R+GLCHGHQ++PWG+A +L L R+++VD+L+TGHTH+ ++ + G PG G+ Sbjct: 3 ADFGELVLIVGDYHIPHRAMDVPEKFKKMLVPNKMQHVLCTGNLVTKEQFDELRDLAPNVHVVRGDFDE--------NTNFPDKKVITIGQYRIGLCHGHQIVPWGDADSLAALQRKMNVDILVTGHTHQYKLHTQNGKWFVNPGSITGA 144
BLAST of EWM23182.1 vs. NCBI_GenBank
Match: gi|813158009|ref|XP_012202353.1| (hypothetical protein SPRG_07685 [Saprolegnia parasitica CBS 223.65] >gi|641532965|gb|KDO26972.1| hypothetical protein SPRG_07685 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 193.741 bits (491), Expect = 1.313e-59 Identity = 89/150 (59.33%), Postives = 112/150 (74.67%), Query Frame = 0 Query: 2 AEFGELVLVLGDLHIPHRAAAIPEKFNCMLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEACPSSLPASAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGGALVPEPGQHLGS 151 A+FGELVL++GD HIPHRA IPEKF MLVPNKMQHVLCTGNLV+ E +EL+ LAPNVHVVRGD DE +A FPD KVVTIG+ R+GLCHGHQ++PWG+ +L L R+++VD+L+TGHTH+ ++ + G PG G+ Sbjct: 3 ADFGELVLIVGDYHIPHRAMDIPEKFKKMLVPNKMQHVLCTGNLVTKETFDELRELAPNVHVVRGDFDE--------NATFPDKKVVTIGQYRIGLCHGHQIVPWGDVDSLAALQRKMNVDILVTGHTHQYKLHAQNGKWFVNPGSITGA 144
BLAST of EWM23182.1 vs. NCBI_GenBank
Match: gi|698795792|ref|XP_009830925.1| (hypothetical protein H257_07184 [Aphanomyces astaci] >gi|574114501|gb|ETV79989.1| hypothetical protein H257_07184 [Aphanomyces astaci]) HSP 1 Score: 194.126 bits (492), Expect = 1.594e-59 Identity = 91/151 (60.26%), Postives = 113/151 (74.83%), Query Frame = 0 Query: 1 MAEFGELVLVLGDLHIPHRAAAIPEKFNCMLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEACPSSLPASAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGGALVPEPGQHLGS 151 MA+FGELVLVLGD+HIPHRA IPEKF MLVPNKMQHVLCTGN+V+ EQ +EL+ LAPNVH+VRGD DE S+ +PD KV+TIG+ R+GLCHGHQ++PWG+ L L R+L+VD+LITGHTH+ + + G PG G+ Sbjct: 1 MADFGELVLVLGDMHIPHRAVDIPEKFKKMLVPNKMQHVLCTGNMVTKEQYDELRGLAPNVHIVRGDFDE--------SSNYPDKKVITIGQFRIGLCHGHQIVPWGDVDCLAALQRKLNVDILITGHTHQYNLHVQHGKWFVNPGSITGA 143
BLAST of EWM23182.1 vs. NCBI_GenBank
Match: gi|673045093|ref|XP_008876507.1| (hypothetical protein H310_11562 [Aphanomyces invadans] >gi|574467895|gb|ETV94916.1| hypothetical protein H310_11562 [Aphanomyces invadans]) HSP 1 Score: 192.586 bits (488), Expect = 3.425e-59 Identity = 92/151 (60.93%), Postives = 112/151 (74.17%), Query Frame = 0 Query: 1 MAEFGELVLVLGDLHIPHRAAAIPEKFNCMLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEACPSSLPASAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGGALVPEPGQHLGS 151 MA+FGELVLVLGD+HIPHRA IPEKF MLVPNKMQHVLCTGNLV+ EQ +EL+ LAPNVH+VRGD DE + +PD KVVTIG+ R+GLCHGHQ++PWG+ L L R+L+VD+LITGHTH+ ++ G PG G+ Sbjct: 1 MADFGELVLVLGDMHIPHRAVDIPEKFKKMLVPNKMQHVLCTGNLVTKEQFDELRDLAPNVHIVRGDFDEG--------SHYPDKKVVTIGQFRIGLCHGHQIVPWGDVDCLGALQRKLNVDILITGHTHEYKLLVHHGKWFINPGSITGA 143
BLAST of EWM23182.1 vs. NCBI_GenBank
Match: gi|669169213|ref|XP_008619955.1| (hypothetical protein SDRG_15557 [Saprolegnia diclina VS20] >gi|530728375|gb|EQC26617.1| hypothetical protein SDRG_15557 [Saprolegnia diclina VS20]) HSP 1 Score: 191.815 bits (486), Expect = 6.255e-59 Identity = 87/150 (58.00%), Postives = 111/150 (74.00%), Query Frame = 0 Query: 2 AEFGELVLVLGDLHIPHRAAAIPEKFNCMLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEACPSSLPASAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGGALVPEPGQHLGS 151 A+FGELVL++GD HIPHRA IPEKF MLVPNKMQHVLCTGNLV+ E +EL+ LAPNVHVVRGD DE + FPD KV+TIG+ R+GLCHGHQ++PWG+ +L L R+++VD+L+TGHTH+ ++ + G PG G+ Sbjct: 3 ADFGELVLIVGDYHIPHRAMDIPEKFKKMLVPNKMQHVLCTGNLVTKETFDELRELAPNVHVVRGDFDE--------NTTFPDKKVITIGQYRIGLCHGHQIVPWGDVDSLAALQRKMNVDILVTGHTHQYKLHAQNGKWFVNPGSITGA 144
BLAST of EWM23182.1 vs. NCBI_GenBank
Match: gi|298711907|emb|CBJ48594.1| (similar to Vacuolar protein sorting 29 (Vesicle protein sorting 29) [Ectocarpus siliculosus]) HSP 1 Score: 188.734 bits (478), Expect = 1.041e-57 Identity = 91/149 (61.07%), Postives = 109/149 (73.15%), Query Frame = 0 Query: 3 EFGELVLVLGDLHIPHRAAAIPEKFNCMLVPNKMQHVLCTGNLVSHEQLEELKALAPNVHVVRGDMDEACPSSLPASAPFPDTKVVTIGELRLGLCHGHQVLPWGEAAALDGLARELDVDVLITGHTHKQQVSERGGALVPEPGQHLGS 151 +FGELVLVLGD+HIPHR AAIPEKF MLVPNKMQHVLCTGNLV +Q +L+ LAPNVHVVRGD +E S FP+TKVV IG+ R+GL HGHQ++PWG+ AL R+L D+LI+GHTH+ QV+E GG PG G+ Sbjct: 4 DFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEE--------STTFPETKVVQIGQFRVGLTHGHQIVPWGDPNALAMTQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGA 144 The following BLAST results are available for this feature:
BLAST of EWM23182.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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