EWM23195.1, cds7478 (CDS) Nannochloropsis gaditana

Overview
NameEWM23195.1
Unique Namecds7478
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:94648..95025 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23195.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101606g1.7483.mrna
GbkeyCDS
End range.
End range95025
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:94648..95025 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23195.1 vs. NCBI_GenBank
Match: gi|585104089|gb|EWM23195.1| (hypothetical protein Naga_101606g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 249.595 bits (636), Expect = 8.292e-84
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 
Query:    1 MGSRPRLFPLLALLLLQTTASFHRLPAPLASTSNKSPSFRAERSSSSCAFGGAVVAPSVLPCDHLVSCPWRKKGTMMRATTEKEEAARDEEEERRAEAARQLSLELEKERSQVEASSRMARLQEVG 126
            MGSRPRLFPLLALLLLQTTASFHRLPAPLASTSNKSPSFRAERSSSSCAFGGAVVAPSVLPCDHLVSCPWRKKGTMMRATTEKEEAARDEEEERRAEAARQLSLELEKERSQVEASSRMARLQEVG
Sbjct:    1 MGSRPRLFPLLALLLLQTTASFHRLPAPLASTSNKSPSFRAERSSSSCAFGGAVVAPSVLPCDHLVSCPWRKKGTMMRATTEKEEAARDEEEERRAEAARQLSLELEKERSQVEASSRMARLQEVG 126
The following BLAST results are available for this feature:
BLAST of EWM23195.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104089|gb|EWM23195.1|8.292e-84100.00hypothetical protein Naga_101606g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7496rna7496Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications