rna7496, rna7496 (mRNA) Nannochloropsis gaditana

Overview
Namerna7496
Unique Namerna7496
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1148
Alignment locationCM002472.1:93912..95025 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101606g1.7483.mrna
Orig protein idgnl|cribi|Naga_101606g1.7483
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:93912..95025 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101606g1gene7257Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7496rna7496-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23195.1cds7478Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7496 ID=rna7496|Name=rna7496|organism=Nannochloropsis gaditana|type=mRNA|length=1148bp
GTTGTGTAAGTTATCTTTCTGGAAAAAAAACGTCGCCTGCGCCTGGCAAC
CTCGTGACGTGGGCGGAAAGCTGACTACTCAGACATTCAATACAAGCACA
GCGTGCCTGCACAAACCCGCGGAGGAACACACTGGGTACACTTATACACG
CAGACATATTTTGTGTGTGAAAGAAAGGAGCAAAGAGGACAAAACCGATT
GTCAGTGCCTCCGTCTTGCTGGCTGTTCAGAGGGCCCCATTATGCTGACT
CCACAGCACGAAATTATCTTCTTCCCCAAACATGTAAAACGGATTCAGAA
CTACAACATAGGACGATGATCTTGTTTACTGCGAGAAGAGGGAGTCAATA
GCCGTCGTTGTTGCTGCCCCGCACAATGGAGGAGGCCTACGCGGAGAAAA
TCAGGCGACAGGCCGCGATAATTGTGGAACTGGGAGAAGAAAATGCATCC
CTAAAATCCTTCATACAAGCAGAGGAAGACAAACTGCTAAAGCGTGAACC
AGGCCCCATGGCGCCCTACGGCCCTTCTTTCTCTCCTCGACCGCGTCTTG
CCCAGCGTACTGACGAGCTAGGGAGGGGGAAGCAGGAGGGCGGGCGAGCA
GAAGAGCGGGGCAGTAGGGTGACGGAGGCGGACAGGGTGCCTAGTCCGTC
CTACCTGGGGCTGAAAGGGAGAGGAATCGGGAGGAGGGGAGAGGTAGTGG
GGCTTCAAGAGTGGTGGAGTGCTCGCGAGGAGGCTGAAGAAAGGCTGTTG
AGGGAGAGGAGAGGGCATGAGACCGAGAGAGTGCGTGGAAAAGGGAGGGA
GGAAGGGACAGAGGCGCGTGACGAGGGAGGAGGGGAGGGAGGAGGGGAGG
GAGGGGGAGTCGCTCCTTGCTACTTCAAAACTGCTTAAGATTCCATAACC
TTTTCCTCTTCTCGCGTCCCCCCTTCCTCCTTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTTCCTTCCTCAGGCCCTATGGATGGGCGAGCGA
GCAAGCCTGCTGCCGCGAAGGGAGAAGCGTGCGGGGTTGGAGGAAGGAAG
GGAGGGAGGGAGGGAGGAAGGGAGGAAGGAGCTCCTGGAGGAGCTCGAGT
GGCTCGTGGGATCGGCTAGGAGGGCGTTGGGTCTAGAAGGGAGGGAGG
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protein sequence of rna7496

>rna7496-protein ID=rna7496-protein|Name=rna7496|organism=Nannochloropsis gaditana|type=polypeptide|length=126bp
MGSRPRLFPLLALLLLQTTASFHRLPAPLASTSNKSPSFRAERSSSSCAF
GGAVVAPSVLPCDHLVSCPWRKKGTMMRATTEKEEAARDEEEERRAEAAR
QLSLELEKERSQVEASSRMARLQEVG
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mRNA from alignment at CM002472.1:93912..95025+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7496 ID=rna7496|Name=rna7496|organism=Nannochloropsis gaditana|type=mRNA|length=1114bp|location=Sequence derived from alignment at CM002472.1:93912..95025+ (Nannochloropsis gaditana)
CTGAAAAATATGCGCCggataggagggaggaggtaagcaAAGGACCGAGA
ATGGTCAACGGGGCAAGAATTCGGATACtgagcaagaaaaaagacaTTGA
AGGAAGTTAACGCACCTGTCGCCTGATTTTCTCCGCGTAGGCCTCCTCCA
TTGTGCGGGGCAGCAACAACGACGGCTATTGACTCCCTCTTCTCGCAGTA
AACAAGATCATCGTCCTGCCATTGTAAGgcccagaggaggagatgtgcCA
TAAATTTATTTCGCAAGCCAACGCATGCGTGTTCACCAAGGGatctccct
ccgcgccatGCTTTGGAAAGCACCTCTTCGATACCTATGTTGTAGTTCTG
AATCCGTTTTACATGTTTGGGGAAGAAGATAATTTCGTGCTGTGGAGTCA
GCATAATGGGGCCCTCTGAACAGCCAGCAAGACGGAGGCACTGACAATCG
GTTTTGTCCTCTTTGCTCCTTTCTTTCACACACAAAATATGTCTGCGTGT
ATAAGTGTACCCAGTGTGTTCCTCCGCGGGTTTGTGCAGGCACGCTGTGC
TTGTATTGAATGTCTGAGTAGTCAGCTTTCCGCCCACGTCACGAGGTTGC
CAGGCGCAGGCGACGTTTTTTTTCCAGAAAGATAACTTACACAACCTGCT
TGTTGCACCGCCATTCCATCACACAGGTGTGCACATAacgagaggagaag
agaccAGAGGGTGTGATTTTGGGCATCGACTCTTCCATGGGCAGCCGGCC
acggcttttccccctcctcgccctcctccttctccagacGACAGCTTCTT
TCCATCGTCTCCCGGCCCCGCTCGCCTCCACTTCTAACAAGTCGCCTTCC
TTTCGAGCAGAACGCTCGAGCTCGTCCTGTGCATTCGGTGGGGCGGTGGT
TGCTCCTTCTGTCCTGCCGTGCGACCACCTTGTTTCCTgcccgtggagga
agaagggtaCGATGATGAGGGCAACgacagagaaggaagaagcggcgcgg
gacgaggaagaggaacggagggcAGAGGCAGCTCGGCAATTGTCGCTTGa
attggagaaggagcggagcCAAGTAGAGGCCTCGTCCAGAATGGCGCGTT
TACAGGAGGTGGGA
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Coding sequence (CDS) from alignment at CM002472.1:93912..95025+

>rna7496 ID=rna7496|Name=rna7496|organism=Nannochloropsis gaditana|type=CDS|length=378bp|location=Sequence derived from alignment at CM002472.1:93912..95025+ (Nannochloropsis gaditana)
ATGGGCAGCCGGCCacggcttttccccctcctcgccctcctccttctcca
gacGACAGCTTCTTTCCATCGTCTCCCGGCCCCGCTCGCCTCCACTTCTA
ACAAGTCGCCTTCCTTTCGAGCAGAACGCTCGAGCTCGTCCTGTGCATTC
GGTGGGGCGGTGGTTGCTCCTTCTGTCCTGCCGTGCGACCACCTTGTTTC
CTgcccgtggaggaagaagggtaCGATGATGAGGGCAACgacagagaagg
aagaagcggcgcgggacgaggaagaggaacggagggcAGAGGCAGCTCGG
CAATTGTCGCTTGaattggagaaggagcggagcCAAGTAGAGGCCTCGTC
CAGAATGGCGCGTTTACAGGAGGTGGGA
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Synonyms
Publications