rna7484, rna7484 (mRNA) Nannochloropsis gaditana

Overview
Namerna7484
Unique Namerna7484
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length405
Alignment locationCM002472.1:72697..73034 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101835g1.10148.mrna
Orig protein idgnl|cribi|Naga_101835g1.10148
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:72697..73034 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101835g1gene7245Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7484rna7484-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23207.1cds7466Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7484 ID=rna7484|Name=rna7484|organism=Nannochloropsis gaditana|type=mRNA|length=405bp
ATGAAATTCGCCGCTTTCGCTTGCTTAGCTTCCCTGATCGGTGCCTCTGC
CTTCGTCGCCCCTGCCCCGAAACAAACTCGCAGCCGCGGCATGGCCCGTA
TGGCCGTAGATGACCTTATCGGCGCGGATGTGGAGACGGGAGGTATCTTC
GACCCCTTGAACTTCTCCAAGGACGCCGAGAAGCTGGACAAGTACCGTGC
GGTCGAGCTCAAGCACGGACGGGTGGCCATGTTGGGCGTGCTGGGTATTT
GGATCCAGGCCGCTGGCTTGCACCTGCCGGACCCCGTTTTCTCGAACCCG
CGTCCCCTGGCTGCTTTCCTCCAGGTCTCCTTCAGCCACCATTTTTACCC
TTCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTC
CTTAG
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protein sequence of rna7484

>rna7484-protein ID=rna7484-protein|Name=rna7484|organism=Nannochloropsis gaditana|type=polypeptide|length=88bp
MARGREGRREGGREGRRKRDRNIGKEGGREGGREGGRGVQRKGGGVRRST
ACDRHLNPALILPIYLSTSKMLRLAHPLSVATRFSMYH
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mRNA from alignment at CM002472.1:72697..73034-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7484 ID=rna7484|Name=rna7484|organism=Nannochloropsis gaditana|type=mRNA|length=338bp|location=Sequence derived from alignment at CM002472.1:72697..73034- (Nannochloropsis gaditana)
ATGGCGAGGGGAAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAAGGAG
GAAGAGAGACAGAAACATAGGTAGCTGGGCGGGGGCTTGAGGATGACAAG
CCCTGAGAAGTAGCAGGGAGTGGCCTCGCCATCGAAGATAGGGAAGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGGAGTACAGAGGAAGGGC
GGTGGAGTCCGACGGAGCACGGCTTGTGACAGGCACCTCAACCCTGCTCT
GATTTTGCCCATATATTTGAGCACATCAAAGATGCTACGATTAGCACATC
CTCTGTCAGTAGCAACGAGGTTTTCAATGTATCATTAG
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Coding sequence (CDS) from alignment at CM002472.1:72697..73034-

>rna7484 ID=rna7484|Name=rna7484|organism=Nannochloropsis gaditana|type=CDS|length=534bp|location=Sequence derived from alignment at CM002472.1:72697..73034- (Nannochloropsis gaditana)
GGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGGAGTACAG
AGGAAGGGCGGTGGAGTCCGACGGAGCACGGCTTGTGACAGGCACCTCAA
CCCTGCTCTGATTTTGCCCATATATTTGAGCACATCAAAGATGCTACGAT
TAGCACATCCTCTGTCAGTAGCAACGAGGTTTTCAATGTATCATTAGATG
GCGAGGGGAAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAAGGAGGAA
GAGAGACAGAAACATAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGAGGAGTACAGAGGAAGGGCGGTGGAGTCCGACGGAGCACGGCT
TGTGACAGGCACCTCAACCCTGCTCTGATTTTGCCCATATATTTGAGCAC
ATCAAAGATGCTACGATTAGCACATCCTCTGTCAGTAGCAACGAGGTTTT
CAATGTATCATTAGATGGCGAGGGGAAGGGAGGGAAGGAGGGAGGGAGGG
AGGGAGGGAAGGAGGAAGAGAGACAGAAACATAG
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Synonyms
Publications