EWM23207.1, cds7466 (CDS) Nannochloropsis gaditana

Overview
NameEWM23207.1
Unique Namecds7466
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:72965..73034 -
Alignment locationCM002472.1:72697..72893 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23207.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101835g1.10148.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:72965..73034 -
CM002472.1supercontigCM002472.1:72697..72893 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23207.1 vs. NCBI_GenBank
Match: gi|585104115|gb|EWM23207.1| (hypothetical protein Naga_101835g1 [Nannochloropsis gaditana])

HSP 1 Score: 171.785 bits (434), Expect = 3.178e-54
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 
Query:    1 MARGREGRREGGREGRRKRDRNIGKEGGREGGREGGRGVQRKGGGVRRSTACDRHLNPALILPIYLSTSKMLRLAHPLSVATRFSMYH 88
            MARGREGRREGGREGRRKRDRNIGKEGGREGGREGGRGVQRKGGGVRRSTACDRHLNPALILPIYLSTSKMLRLAHPLSVATRFSMYH
Sbjct:    1 MARGREGRREGGREGRRKRDRNIGKEGGREGGREGGRGVQRKGGGVRRSTACDRHLNPALILPIYLSTSKMLRLAHPLSVATRFSMYH 88
The following BLAST results are available for this feature:
BLAST of EWM23207.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104115|gb|EWM23207.1|3.178e-54100.00hypothetical protein Naga_101835g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7484rna7484Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications