EWM23246.1, cds7427 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23246.1 vs. NCBI_GenBank
Match: gi|585104212|gb|EWM23246.1| (hypothetical protein Naga_101622g1 [Nannochloropsis gaditana]) HSP 1 Score: 664.07 bits (1712), Expect = 0.000e+0 Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0 Query: 1 MKEAGKIKTIVVQGVIVVLAALCLFWTMNYASAQVSLEKKGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAAHWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNIQWAGGACIEYAFVRLASPEARLAGIVNNTRSRT 317 MKEAGKIKTIVVQGVIVVLAALCLFWTMNYASAQVSLEKKGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAAHWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNIQWAGGACIEYAFVRLASPEARLAGIVNNTRSRT Sbjct: 1 MKEAGKIKTIVVQGVIVVLAALCLFWTMNYASAQVSLEKKGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAAHWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNIQWAGGACIEYAFVRLASPEARLAGIVNNTRSRT 317
BLAST of EWM23246.1 vs. NCBI_GenBank
Match: gi|585104207|gb|EWM23245.1| (hypothetical protein Naga_101786g1 [Nannochloropsis gaditana]) HSP 1 Score: 639.032 bits (1647), Expect = 0.000e+0 Identity = 306/317 (96.53%), Postives = 309/317 (97.48%), Query Frame = 0 Query: 1 MKEAGKIKTIVVQGVIVVLAALCLFWTMNYASAQVSLEKKGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAAHWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNIQWAGGACIEYAFVRLASPEARLAGIVNNTRSRT 317 MKEA KIKTIVVQGVIVVLAALCLFWT+NYASAQVSLE+KGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAA WYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPN GG CIEYAFV+LASPE RLAGIVNNTRSRT Sbjct: 18 MKEADKIKTIVVQGVIVVLAALCLFWTVNYASAQVSLEEKGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNTLGCGGRCIEYAFVKLASPEVRLAGIVNNTRSRT 334
BLAST of EWM23246.1 vs. NCBI_GenBank
Match: gi|553193072|ref|XP_005855704.1| (hypothetical protein NGA_0645500 [Nannochloropsis gaditana CCMP526] >gi|422293356|gb|EKU20656.1| hypothetical protein NGA_0645500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 540.036 bits (1390), Expect = 0.000e+0 Identity = 257/263 (97.72%), Postives = 257/263 (97.72%), Query Frame = 0 Query: 55 MAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAAHWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNIQWAGGACIEYAFVRLASPEARLAGIVNNTRSRT 317 MAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAA WYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPN GG CIEYAFVRLASPEARLAGIVNNTRSRT Sbjct: 1 MAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNTLGCGGRCIEYAFVRLASPEARLAGIVNNTRSRT 263
BLAST of EWM23246.1 vs. NCBI_GenBank
Match: gi|145356262|ref|XP_001422352.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144582593|gb|ABP00669.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 190.274 bits (482), Expect = 1.831e-54 Identity = 106/252 (42.06%), Postives = 145/252 (57.54%), Query Frame = 0 Query: 97 WYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGL--SNKNDGK-YKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGT-----------------------EGAT-----PVPAMKFMESLSQRGFVIFHKEPNIQWA--GGACIEYAFVRLASPEARLAGIVNNTRS 315 WYQ+N EP TC E R+G G+GGK +CDP R+ A+ G L+YSVGS +DFSFEE+I+RD+S ACEIH FD T+ + KP + F PWGL + + DG K+L ++ L H R ID+LKIDCEGCEWS+Y SW+D +R+ ++L+E+H GT GA PV A +F L F IFHKEPNI+++ C+E+AF+R + + G+ N+ S Sbjct: 104 WYQDNVEPAVTCAREERVGPAGEGGKCLCDPNRLRARGADG---LIYSVGSFDDFSFEEAIMRDVSSACEIHVFDHTVSNPRNKPCG---VHFQPWGLGGAREPDGSDLKSLADVVVALGHKGRTIDVLKIDCEGCEWSTYGSWIDADVRVDEMLVEIHAGTIDSNLKEVHQSWLSLIVGDQLFGRGALDPLREPV-AKRFFRRLHDENFYIFHKEPNIKYSLLHKMCVEFAFIRF---DGGIEGVENSLNS 345
BLAST of EWM23246.1 vs. NCBI_GenBank
Match: gi|219124571|ref|XP_002182574.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405920|gb|EEC45861.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 184.882 bits (468), Expect = 2.306e-52 Identity = 113/314 (35.99%), Postives = 163/314 (51.91%), Query Frame = 0 Query: 10 IVVQGVIVVLAALCLFWT---MNYASAQVSLEKKGNSQLRTSDISPFK--MAMEGSEGFFDDIRDAGWKRLMERI----QTTPSCAASCAAEPAAHWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPA-CEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYK-------------TLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNIQWAGGACIEYAFVRLA 300 I+ GV++ +AA+ + W+ ++ +S Q + ++ P+ +A + S GFFDDI D W R+ Q E WY NN EP+F+C R+G GDG KWVCDP R+ AK + CL+YS+GS+ ++ FE+S+L CEIH FD DRP D +I +HPWGL + D Y T Q I++ L+H NR ID+ KIDCEGCEWSSY+ W+DK +RQI IE+H + + F S F +F KE N Q+ +C E ++++L+ Sbjct: 45 ILFIGVMLSIAAVDI-WSRRRLSTSSDQQAFRTSVSTNQHQKSFEPWSTGLAAKQSFGFFDDIGDTAWSRMRNNAVNFQQYRKPQKPDTGNEDPWRWYINNLEPDFSCPHAARVGGHGDGPKWVCDPHRLQAKDD----CLIYSIGSSGNYLFEDSLLGLAGKGQCEIHVFDFGDFDRPEN--ADNRIFYHPWGLGSSYDDVYSDRIKKIAGEQEVLTFQEILRRLNHENRTIDLFKIDCEGCEWSSYKDWIDKD--LRQIQIEVHGLPSARSGISGSDFYNSFRNNSFAMFSKEHN-QFT-KSCYELSYIKLS 347
BLAST of EWM23246.1 vs. NCBI_GenBank
Match: gi|308799960|ref|XP_003074761.1| (predicted CDS, putative protein family member, with a coiled coil-4 domain (ISS) [Ostreococcus tauri]) HSP 1 Score: 182.57 bits (462), Expect = 1.557e-51 Identity = 101/242 (41.74%), Postives = 131/242 (54.13%), Query Frame = 0 Query: 87 ASCAAEPAAHWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGT-----------------------EGATPVP----AMKFMESLSQRGFVIFHKEPNIQWA--GGACIEYAFVRL 299 +S + A WYQ+N EP TC E RIG G+GGKW+CDP R+ AK G CL+YSVGS++DFSFEE+I++D+S ACEIH FD DR G K+L I+ L H R IDILKIDCEGCEWS+Y SW D +R+ ++L+E+H GT GA V A +F + L F IFHKEPNI+++ C+E+ F+R Sbjct: 112 SSGGTQRADGWYQDNVEPAVTCAREERIGPAGEGGKWLCDPNRLRAK---GTDCLIYSVGSSDDFSFEEAIMQDVSSACEIHVFD----DRTR-------------GAHEPAGSALKSLADIVAALGHKGRTIDILKIDCEGCEWSTYGSWFDADVRVDEMLVEIHAGTIISNSNEIHQSWLSLIVGEQLFGRGALEVSREPVAKRFFQRLYDETFYIFHKEPNIKYSRLHKMCVEFGFIRF 333
BLAST of EWM23246.1 vs. NCBI_GenBank
Match: gi|145356108|ref|XP_001422281.1| (hypothetical protein OSTLU_93976, partial [Ostreococcus lucimarinus CCE9901] >gi|144582522|gb|ABP00598.1| hypothetical protein OSTLU_93976, partial [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 181.415 bits (459), Expect = 2.156e-51 Identity = 107/257 (41.63%), Postives = 143/257 (55.64%), Query Frame = 0 Query: 92 EPAAHWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGL--SNKNDGK-YKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGT-----------------------EGAT-----PVPAMKFMESLSQRGFVIFHKEPNIQWA--GGACIEYAFVRLASPEARLAGIVNNTRS 315 + A WYQ+N EP TC E R G G+GGK +CDP R+ A+ G CL+YSVGS +DFSFEE+I RD+S A EIH FD T+ + KP + FHP GL + + DG K L I+ L H R ID+LKIDCEGCEWS+Y SW D +R+ ++L+E+H GT GA PV A +F+ L F IFHKEPNI+++ C+E+A +R + + G+ N+ S Sbjct: 77 QKADGWYQDNVEPAVTCAREERAGPAGEGGKGLCDPNRLRAQ---GADCLIYSVGSFDDFSFEEAITRDVSSAREIHAFDHTVSNPRNKPCG---VHFHPLGLGGAREPDGSDLKGLADIVVALGHKGRTIDVLKIDCEGCEWSTYGSWFDADVRVDEMLVEIHAGTIDSNLNEIHQSWLSLIVGEQLFGRGALDPSREPV-AKRFLRRLYDENFYIFHKEPNIKYSRLHKMCVEFALIRF---DGGIEGVENSPNS 323
BLAST of EWM23246.1 vs. NCBI_GenBank
Match: gi|219128751|ref|XP_002184569.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404019|gb|EEC43968.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 177.178 bits (448), Expect = 1.294e-49 Identity = 111/322 (34.47%), Postives = 167/322 (51.86%), Query Frame = 0 Query: 5 GKIKTIVVQGV--IVVLAALCLFWTMNYASAQVSLEKKG---NSQLRTSDISPFK--MAMEGSEGFFDDIRDAGWKRLMERIQT-----TPSCAASCAAEPAAHWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPA-CEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYK-------------TLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNIQWAGGACIEYAFVRLA 300 GKI++ V+ V +V +AA+ +++ + A ++ + N Q+ P +A S GFFDDI D W ++ ++ T P + +A+P WY N +P+FTC R+G GDG KWVCDP R+ + CL+YS GSN ++ FE+S+L + CEIH FD DRP P D++I +H WGL + D Y T Q I + L+H +R ID+ KIDCEGCEW +Y+ W+ G+ RQ+ IE+H G F ++ F +F KE N Q+ C E+++V+L+ Sbjct: 16 GKIRSTVITLVAFLVSIAAIDVWFQRSTAVSESYATRAAIAVNQQVAVKSFEPISTGLAARQSFGFFDDIGDNSWNKMRKKAVTFQQYQNPKNPNAGSADPWK-WYIRNLQPDFTCQHVIRVGGHGDGPKWVCDPHRLRTR----DNCLIYSFGSNGNYLFEDSMLDLVGKGQCEIHVFDFGDFDRPQNP--DKRIHYHQWGLGSSYDQAYNEKIKKRAGEQEVLTFQEIQRRLNHEDRTIDLFKIDCEGCEWRNYKDWI--GVDARQVQIEVH----GLPSSNGSDFFDAFRDNSFAMFSKEHN-QYT-KHCYEFSYVKLS 322
BLAST of EWM23246.1 vs. NCBI_GenBank
Match: gi|873236193|emb|CEL99428.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 179.104 bits (453), Expect = 1.932e-49 Identity = 100/227 (44.05%), Postives = 134/227 (59.03%), Query Frame = 0 Query: 94 AAHWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEA-GHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGK----------YKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWLDKGI-----RIRQILIELHQ-GTEGATPVPAMK-FMESLSQRGFVIFHKEPNIQWAGGACIEYAFVRLASP 302 A +YQ +EP+++C E R+G GDGGKWVCDP RI+++++A G CLVYSVG +N++SFE+S+ + + CE+HTFD T+ AKP E I FH WG+ G L I+ L H NREIDI KID EG E+ S L G IRQ+LIE+H G V K + + G+V+FHKEPNIQ+AGG C+E+AF++L P Sbjct: 188 GATFYQMFFEPDWSCEFEMRLGTLGDGGKWVCDPDRIISRSKASGKPCLVYSVGGSNEWSFEDSVYKTL--GCEVHTFDHTVATPKAKP---EHINFHRWGIDQPGRGASLQADNPGPLTAGLNEIITALGHENREIDIFKIDVEGAEFKSLTPLLTSGAWRKKPPIRQVLIEVHVFGNHQQQAVEMNKELLSAFLNNGYVMFHKEPNIQYAGGNCVEFAFLQLDLP 409
BLAST of EWM23246.1 vs. NCBI_GenBank
Match: gi|397641477|gb|EJK74669.1| (hypothetical protein THAOC_03642 [Thalassiosira oceanica]) HSP 1 Score: 172.94 bits (437), Expect = 4.319e-48 Identity = 99/228 (43.42%), Postives = 136/228 (59.65%), Query Frame = 0 Query: 97 WYQNNWEPNFTCLDERRIG--RWGDGGKWVCDPRRIVA------KAEAGH-GCLVYSVGSNNDFSFEESILRDISPA-CEIHTFD-PTIGDRPAKPLTDEQITFHPWGLSN------------KNDGKYKTLQTIMQDLDHGNRE-IDILKIDCEGCEWSSYESWLDKGIRI-RQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNIQWAGGACIEYAFVRL 299 WYQNN+EPNF+C E+R+G GDG KWVCDP RIV KA+ H GC+VYSVGSN DF+FE + +++ CE H FD + R K L ++ +FH WGL N +YK+L +++L H + IDI KIDCEGCEW ++ W+ + + QIL+E+H+ A + F +SL + G++ FHKEPNIQW+ CIEYAFV++ Sbjct: 93 WYQNNYEPNFSCPYEKRVGIPMNGDGAKWVCDPHRIVGLAAERKKADPRHPGCVVYSVGSNGDFTFELGVQKEVGVGTCEFHIFDIDSYEHRVPKEL--KRASFHHWGLGTAVKKGDVIPQRVNNGMRYKSLSDTVKELHHEKLDVIDIFKIDCEGCEWDTHRDWVSGKVPLMHQILVEVHK----APIDKVLNFFDSLEKEGYLRFHKEPNIQWSAD-CIEYAFVKV 313 The following BLAST results are available for this feature:
BLAST of EWM23246.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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