EWM23249.1, cds7424 (CDS) Nannochloropsis gaditana

Overview
NameEWM23249.1
Unique Namecds7424
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:596670..596838 -
Alignment locationCM002471.1:596299..596493 -
Alignment locationCM002471.1:595681..595895 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23249.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101341g1.9406.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:596670..596838 -
CM002471.1supercontigCM002471.1:596299..596493 -
CM002471.1supercontigCM002471.1:595681..595895 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23249.1 vs. NCBI_GenBank
Match: gi|585104219|gb|EWM23249.1| (hypothetical protein Naga_101341g1 [Nannochloropsis gaditana])

HSP 1 Score: 380.948 bits (977), Expect = 1.350e-133
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0 
Query:    1 MQFEKRPDFLGDDSTARSTVVCLGPPQHFLREALNATVLPSPAVLAKMGHNAPKIPNLRHEPGRVQRVPECLTSLVLDLHNTSPPPGCPTPRPCNAFRPVPLSWCARCGQRDVREHHWPQIGPGGNNGRRSAQAPSPATSGYRLAVKAGRPGLRRGGPPPRSSTDPAMPGRRGRRLHLGRLPPPTLPGSELG 192
            MQFEKRPDFLGDDSTARSTVVCLGPPQHFLREALNATVLPSPAVLAKMGHNAPKIPNLRHEPGRVQRVPECLTSLVLDLHNTSPPPGCPTPRPCNAFRPVPLSWCARCGQRDVREHHWPQIGPGGNNGRRSAQAPSPATSGYRLAVKAGRPGLRRGGPPPRSSTDPAMPGRRGRRLHLGRLPPPTLPGSELG
Sbjct:    1 MQFEKRPDFLGDDSTARSTVVCLGPPQHFLREALNATVLPSPAVLAKMGHNAPKIPNLRHEPGRVQRVPECLTSLVLDLHNTSPPPGCPTPRPCNAFRPVPLSWCARCGQRDVREHHWPQIGPGGNNGRRSAQAPSPATSGYRLAVKAGRPGLRRGGPPPRSSTDPAMPGRRGRRLHLGRLPPPTLPGSELG 192
The following BLAST results are available for this feature:
BLAST of EWM23249.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104219|gb|EWM23249.1|1.350e-133100.00hypothetical protein Naga_101341g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7442rna7442Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications