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Properties
Property Name | Value |
Product | Pumilio RNA-binding repeat containing protein |
Orig transcript id | gnl|cribi|Naga_101027g1.10516.mrna |
Orig protein id | gnl|cribi|Naga_101027g1.10516 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002471.1 | supercontig | CM002471.1:543254..544323 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7415 ID=rna7415|Name=rna7415|organism=Nannochloropsis gaditana|type=mRNA|length=582bp ATGGCCGTGTCGCGGGAAAGTTCCAGGGGATGGGATGTGTGGGTGCCAAA ACGCGGAGCGAGGCAGGGCAGGGAAGGTATCGGATGTGGAAGACTGAGGT TCCGGGGACAGGACGCACTGATGCTAGGGCCGGCGAGCTCCGGCTTGGCA CCCGTCAAGGACGGCCAGTGCGGTCAATGTAGCAGCGGCAGGCTGAAGAT CTTACATATACGTGTATGCTATGCAGAGGCGAGTCGTGACGAAGGCCAGA AGAGGGAAGGGGGGGCTAGGCATGGCATATGGCTACGGACTGAGCATGCT GGGGCTTCGACGACGGCACATTTTCCCAAAAGACGGGCATGTGGGAGCAT GGCGGGGCTTTGTGATGAGCAGAGATGGGACGTACTTGCCCGAGAAAAAG TCAAACGACTGCCCAGTGAAGACTGGATTGACTGGGCCCATGTGGAAATG GAAAGGCGAGGGGGAGGGAGCGGAAAGGAGGGGGGGCGACGTGGGAGGAC AAGTAGACGAGCGGATAGGATGATGCAGGCAGGGACAACGCGGATGCAGG GCTTAAATCGTGTACGTAAACATAAGTTGTAG back to topprotein sequence of rna7415 >rna7415-protein ID=rna7415-protein|Name=rna7415|organism=Nannochloropsis gaditana|type=polypeptide|length=212bp MRPRPERQPHHPEYAAFLLPQLEFIINAFVGQGNNVEKFSTHPYGCRVIQ RILEHCTGAQKSAILDEIRKSSSTLIQDQYGNYVIQHVMKHGRPNDRQMV INEVKSRMLVYSQHKFASNVVEKCLQYGSKAERNDIIDEVVRSVLDKSSL LQVMVRDPYGNYVVQKILDIADDRQQEALCTYLRSCAPQLRRYTYGKHIL VRLEKISGEKLV back to topmRNA from alignment at CM002471.1:543254..544323- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7415 ID=rna7415|Name=rna7415|organism=Nannochloropsis gaditana|type=mRNA|length=1070bp|location=Sequence derived from alignment at CM002471.1:543254..544323- (Nannochloropsis gaditana) ATGCGTCCACGACCAGAACGGCAACCACGTGATCCAGAAATGCATCGAAG
TGCTCTCTGTCCGATCCAAAGACCATCCGGAATACGCTGCCTTCCTCCTT
CCACAGCTGGAATTCATCATCAACGCCTTTGTGGGACAGGTGGGTCTTTT
GCCCCTCCCTCCTTCCCTCCTTCCCTCCTTCCCTCCTTCCCTCCTCACCT
CGCTCCTTTCCCTCCACCCGTGCTTTTTCAGGGGAACAACGTGGAGAAAT
TCAGCACGCACCCCTACGGCTGCCGCGTCATCCAACGCATTCTAGAACAT
TGCACGGGCGCGCAGAAAAGTGCCATTCTTGACGAGATTCGGAAGAGCTC
TTCCACACTCATTCAAGATCAGTACGGCAACTACGTGATCCAACATGTCA
TGAAGGTGCGTTGTGCCCCACCCCCTTTCCCTCCCTCCTTCCCTCCCTCC
TTCCCCCCATCCTCTCCCGTGTCTTGAGGACGCTGAGCCCCTCCGATTAG
GATGAGGACGCTACTCAAGCCTTCACCTTCTCTCCCTCCCTCTCTCCCTC
CTTTCCCCTTTCGCTTTGTAGCACGGCCGTCCAAACGATCGACAGATGGT
GATTAATGAGGTGAAGAGCCGCATGCTCGTGTACTCGCAGCACAAGTTTG
CCTCCAATGTGGTGGAGAAATGCTTGCAGGTAGGAGGGAGGGACGGAGGG
AGGGAAGGAGGGAGAGGTGGGAGGGTACACGAAAGGGAAGGACGCCCTAG
ACCCCTCCTCATTGGCGGGGCCTCTCCCTCCTCGTTTCCTCCCTCCCCCT
CGGGCACAGTACGGGAGTAAGGCCGAGCGCAACGACATCATCGACGAGGT
GGTGCGCTCCGTCTTGGACAAATCTTCCCTCTTGCAGGTGATGGTCCGAG
ACCCTTATGGGAACTACGTGGTGCAGAAGATCTTGGACATCGCTGACGAC
CGGCAGCAGGAGGCGCTTTGCACTTACCTTAGGTCGTGTGCGCCCCAATT
GAGGCGGTACACGTATGGGAAGCACATATTGGTTCGGTTGGAGAAGATCA
GCGGGGAGAAATTGGTTTGA back to topCoding sequence (CDS) from alignment at CM002471.1:543254..544323- >rna7415 ID=rna7415|Name=rna7415|organism=Nannochloropsis gaditana|type=CDS|length=3195bp|location=Sequence derived from alignment at CM002471.1:543254..544323- (Nannochloropsis gaditana) TACGGGAGTAAGGCCGAGCGCAACGACATCATCGACGAGGTGGTGCGCTC CGTCTTGGACAAATCTTCCCTCTTGCAGGTGATGGTCCGAGACCCTTATG GGAACTACGTGGTGCAGAAGATCTTGGACATCGCTGACGACCGGCAGCAG GAGGCGCTTTGCACTTACCTTAGGTCGTGTGCGCCCCAATTGAGGCGGTA CACGTATGGGAAGCACATATTGGTTCGGTTGGAGAAGATCAGCGGGGAGA AATTGGTTTGACACGGCCGTCCAAACGATCGACAGATGGTGATTAATGAG GTGAAGAGCCGCATGCTCGTGTACTCGCAGCACAAGTTTGCCTCCAATGT GGTGGAGAAATGCTTGCAGGGGAACAACGTGGAGAAATTCAGCACGCACC CCTACGGCTGCCGCGTCATCCAACGCATTCTAGAACATTGCACGGGCGCG CAGAAAAGTGCCATTCTTGACGAGATTCGGAAGAGCTCTTCCACACTCAT TCAAGATCAGTACGGCAACTACGTGATCCAACATGTCATGAAGACCATCC GGAATACGCTGCCTTCCTCCTTCCACAGCTGGAATTCATCATCAACGCCT TTGTGGGACAGATGCGTCCACGACCAGAACGGCAACCACTACGGGAGTAA GGCCGAGCGCAACGACATCATCGACGAGGTGGTGCGCTCCGTCTTGGACA AATCTTCCCTCTTGCAGGTGATGGTCCGAGACCCTTATGGGAACTACGTG GTGCAGAAGATCTTGGACATCGCTGACGACCGGCAGCAGGAGGCGCTTTG CACTTACCTTAGGTCGTGTGCGCCCCAATTGAGGCGGTACACGTATGGGA AGCACATATTGGTTCGGTTGGAGAAGATCAGCGGGGAGAAATTGGTTTGA CACGGCCGTCCAAACGATCGACAGATGGTGATTAATGAGGTGAAGAGCCG CATGCTCGTGTACTCGCAGCACAAGTTTGCCTCCAATGTGGTGGAGAAAT GCTTGCAGGGGAACAACGTGGAGAAATTCAGCACGCACCCCTACGGCTGC CGCGTCATCCAACGCATTCTAGAACATTGCACGGGCGCGCAGAAAAGTGC CATTCTTGACGAGATTCGGAAGAGCTCTTCCACACTCATTCAAGATCAGT ACGGCAACTACGTGATCCAACATGTCATGAAGACCATCCGGAATACGCTG CCTTCCTCCTTCCACAGCTGGAATTCATCATCAACGCCTTTGTGGGACAG ATGCGTCCACGACCAGAACGGCAACCACTACGGGAGTAAGGCCGAGCGCA ACGACATCATCGACGAGGTGGTGCGCTCCGTCTTGGACAAATCTTCCCTC TTGCAGGTGATGGTCCGAGACCCTTATGGGAACTACGTGGTGCAGAAGAT CTTGGACATCGCTGACGACCGGCAGCAGGAGGCGCTTTGCACTTACCTTA GGTCGTGTGCGCCCCAATTGAGGCGGTACACGTATGGGAAGCACATATTG GTTCGGTTGGAGAAGATCAGCGGGGAGAAATTGGTTTGACACGGCCGTCC AAACGATCGACAGATGGTGATTAATGAGGTGAAGAGCCGCATGCTCGTGT ACTCGCAGCACAAGTTTGCCTCCAATGTGGTGGAGAAATGCTTGCAGGGG AACAACGTGGAGAAATTCAGCACGCACCCCTACGGCTGCCGCGTCATCCA ACGCATTCTAGAACATTGCACGGGCGCGCAGAAAAGTGCCATTCTTGACG AGATTCGGAAGAGCTCTTCCACACTCATTCAAGATCAGTACGGCAACTAC GTGATCCAACATGTCATGAAGACCATCCGGAATACGCTGCCTTCCTCCTT CCACAGCTGGAATTCATCATCAACGCCTTTGTGGGACAGATGCGTCCACG ACCAGAACGGCAACCACTACGGGAGTAAGGCCGAGCGCAACGACATCATC GACGAGGTGGTGCGCTCCGTCTTGGACAAATCTTCCCTCTTGCAGGTGAT GGTCCGAGACCCTTATGGGAACTACGTGGTGCAGAAGATCTTGGACATCG CTGACGACCGGCAGCAGGAGGCGCTTTGCACTTACCTTAGGTCGTGTGCG CCCCAATTGAGGCGGTACACGTATGGGAAGCACATATTGGTTCGGTTGGA GAAGATCAGCGGGGAGAAATTGGTTTGACACGGCCGTCCAAACGATCGAC AGATGGTGATTAATGAGGTGAAGAGCCGCATGCTCGTGTACTCGCAGCAC AAGTTTGCCTCCAATGTGGTGGAGAAATGCTTGCAGGGGAACAACGTGGA GAAATTCAGCACGCACCCCTACGGCTGCCGCGTCATCCAACGCATTCTAG AACATTGCACGGGCGCGCAGAAAAGTGCCATTCTTGACGAGATTCGGAAG AGCTCTTCCACACTCATTCAAGATCAGTACGGCAACTACGTGATCCAACA TGTCATGAAGACCATCCGGAATACGCTGCCTTCCTCCTTCCACAGCTGGA ATTCATCATCAACGCCTTTGTGGGACAGATGCGTCCACGACCAGAACGGC AACCACTACGGGAGTAAGGCCGAGCGCAACGACATCATCGACGAGGTGGT GCGCTCCGTCTTGGACAAATCTTCCCTCTTGCAGGTGATGGTCCGAGACC CTTATGGGAACTACGTGGTGCAGAAGATCTTGGACATCGCTGACGACCGG CAGCAGGAGGCGCTTTGCACTTACCTTAGGTCGTGTGCGCCCCAATTGAG GCGGTACACGTATGGGAAGCACATATTGGTTCGGTTGGAGAAGATCAGCG GGGAGAAATTGGTTTGACACGGCCGTCCAAACGATCGACAGATGGTGATT AATGAGGTGAAGAGCCGCATGCTCGTGTACTCGCAGCACAAGTTTGCCTC CAATGTGGTGGAGAAATGCTTGCAGGGGAACAACGTGGAGAAATTCAGCA CGCACCCCTACGGCTGCCGCGTCATCCAACGCATTCTAGAACATTGCACG GGCGCGCAGAAAAGTGCCATTCTTGACGAGATTCGGAAGAGCTCTTCCAC ACTCATTCAAGATCAGTACGGCAACTACGTGATCCAACATGTCATGAAGA CCATCCGGAATACGCTGCCTTCCTCCTTCCACAGCTGGAATTCATCATCA ACGCCTTTGTGGGACAGATGCGTCCACGACCAGAACGGCAACCAC back to top
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