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Properties
Property Name | Value |
Product | amp-dependent synthetase and ligase |
Orig transcript id | gnl|cribi|Naga_101051g1.10358.mrna |
Orig protein id | gnl|cribi|Naga_101051g1.10358 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002471.1 | supercontig | CM002471.1:471016..473069 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7390 ID=rna7390|Name=rna7390|organism=Nannochloropsis gaditana|type=mRNA|length=1965bp TCACATGCCTGGGTTTGGAAGGCGGCACCAGCCTTGTTTGGCTGGCAAGA TGGATGGAGGCGGCGGCAGCAAAGTCCAGACGTTCGACCCCTTGGCATTG GTGGGCAGGAAGAATAAAGGCCGCGCCTCGTCTACCACCAGCAGCAGCGG CACGACGTCTTTATTGGAGAGACAAGAGAGCTTAGAAGGAGAATTAGAAG AGGGAGTGTCACTGGAGGGAACGGACGAGAAAGACAACACGATTTACAAG GCCATGCTGGTGGTGGTAGCTTTGTTGTGGGGCTCTAACTTCGGCGCGCT CAAATACTTGGACACCTGCGGTGTGGACGTATCTTTGCTCACAAGCATGC GCTTTCTCTTGGCCTCGGTGGCGCTCTTACCCTTCTTATGGGGGAAAGGA ATGCCGGTCTTGAAGGCGGGGCTGGAGGTGGGCCTGTGGGTCACCCTGGG GTACATCACGCAGGCGATCGGCCTGGAAACTACGGAGGCCTCCAAGTCCG CCTTTATCTGCTCTCTGACCGTGGTGGTGGTGCCGCTCATCCAAGGTCTG CTGGGCAAGAAGATCGCGCCCACCACCTGGACCGCCTGCGGCCTGGCCGT CCTCGGTGTCGGGCTCCTGACCTTGCAAGGCGCCACGGGCCCCGTGATTG GAGACTTGTGGTCTCTAGGCCAGCCTCTGGGGTTCGGTATCGCCTTCATG CGCATCGAGCACTACATGAAGCAGCTCCCTGGCAAGGCCATCCCCCTGGC GGCTGCCCAGATGATCTCAGTCTTCGGAGTCTCGGCCGTATGGGCCGCCG TGACGACCGGCATGTTCCAGAACACGGGAGACCTGAGCATCCTCTTCGAC ACGCCCCACTTCCTCTCTCTCCTCTACACGGGCCTGATTTCGAGCGCCCT GGCTGTGGTGATCGAGTCGGCGGCCCTGGAATACGTCTCCTCGGAGGAGA CCTCGATCATTTTCTCCACGGAACCCCTCTTTGCCGCAGCCACGTCCGCC GTGGTGTTGGGAGAGCGCTTGAAGCCTTCGGGGATACTGGGTGGGTTCGT GATCCTTTCCGCCTGCCTGCTTACCCAGGTGGACCTGACCTCTCTGGCCA CCGTGCTGCCTATCCTCTCCCGAGTGGCGGACGAGGGCAGCCAGCGTACG CAGGACTGAAGCGAGGGAGCGGGGATGTGCGACGCGGGGAGTGACTGGAA CCCAGAGAGCACCGGAAGATCATGATAGGGACGGAAGCCCTGGGGCTGGA GATAGGGGTTGGACGGAAGGAAAGTGCGAAATTGTCGGTGACGTTAGCGG GAGCTTGGAGATTGAGGTTGAGCTGTAGGGGTACGCGCGAAGGCTGTCGA GCATTGTAGACGATAGATTTGGTTGTGTGGAGGCGGAAAATAGGGAAGAG AGTCCCGGCTAGCCAGCGGAAGATGGTAGCTTAAAGCCAGAGATGAGTGT GAGGGAGGGATTGAAAATGAAAGATGCCGCCTTTGTGGGAGGGCATATGG AAGCCGGGGACATTGTCATTACTACACACGGCCGTAGGACTGCCGTCGTA GCAACCAGCGCCAGGATGTAATTCGGAAAAACGCAAGGAAGTAAGAGACG GAAATTCATGGAGGGGCACGGAAGTCGCGACCTCCGGGTGCGAAGAAAAG AAGACAAATATTATGTCAGAAGGAAAGTTGCGAAAATTGGAGATTTTTTC GCCTCGCATGGACGGGGGGAGATCTAGGCGTCGAGTCCAATGCTTTGCCA GAAAAGACCAGTGTCAAGCAGCTGACAGATCACGTTCGTGGCCTGCCTCT TCCTTTTCAGTCTCCTTAACACGGATCTGATCTCGATGCCCATGATCTGT CGCGTTGCTAACTTTTCCGCGAGACTGAGTACAAGACAAGATTACCAAGG GAACGATTTGATCGAAGCCGATATACTCATGTCCTCACACACAAGCTCTA TACTGCGCTGGGGCT back to topprotein sequence of rna7390 >rna7390-protein ID=rna7390-protein|Name=rna7390|organism=Nannochloropsis gaditana|type=polypeptide|length=532bp TFLPLSLPPSLLPLAELANLPPPTQVLTFDEALSASLARPLTFRPVPKDV RSVATLVYTSGTTNKPKGVVLRHSNLLHQVNYNSFTDSPSKEPAYNPVLG DVLVSVLPCWHIFERTAEYWMFSKGIHVVYSNVKNFKADLAKHQPQFIVA VPRLLETIYRGVLQKFAAEKGAKKKIIEFFTRVGSAWVKAWRVARGLVLR SRAPNPIERLLALVLALVLSPLAAVGDKLVWSKVRAGLGGRIKVLVAGGS SMPLVLEDFFELLRTPVIVGYGMTETSPVITNRVAEKNLAGSVGRTARDT EVKIVDPESGARLPEGQPGLVLMRGPQMMAGYKSNAEASKAVLDQEGFLD TGDLGRIHPLTKHLIITGRAKDTIVLSNGENVEPQPIEDVVCANSALVDQ VMCVGQDEKVLGMLVVPNVRALARAGLVDRGLAERVAELLGGQVLTNGIA GSRAELEEVEASLREKKEVKKALLADIARAMGKSFRETERVGAVEVVLEP FNMANGFLTQTLKVKRNVVSGHYAQEIEQMYR back to topmRNA from alignment at CM002471.1:471016..473069- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7390 ID=rna7390|Name=rna7390|organism=Nannochloropsis gaditana|type=mRNA|length=2054bp|location=Sequence derived from alignment at CM002471.1:471016..473069- (Nannochloropsis gaditana) ACCTTCCTCCCCCTCTCCCTTCCCCCCTCCCTCCTCCCTCTTGCAGAGCT
GGCCAACCTGCCCCCTCCCACACAGGTGCTCACCTTCGACGAGGCCCTCT
CCGCCTCCCTGGCCCGGCCCCTGACCTTCCGGCCCGTCCCTAAGGACGTG
CGCTCTGTGGCCACCCTAGTCTACACGTCGGGGACCACCAACAAGCCCAA
GGGCGTCGTCCTCCGGCACTCGAACCTGCTGCACCAGGTCAATTACAACT
CCTTCACGGATTCCCCTTCCAAAGAGCCCGCCTACAACCCCGTCCTGGGT
GATGTCCTCGTCTCGGTCCTTCCCTGCTGGCACATCTTCGAGCGCACCGC
CGAGTACTGGATGTTCAGCAAGGGGATCCACGTCGTCTACTCAAACGTCA
AGAACTTCAAGGCCGACCTGGCCAAGCACCAACCCCAATTCATCGTCGCA
GTTCCCCGGCTCTTGGAAACGATTTACCGGGGCGTCTTGCAAAAGTTTGC
TGCGGAAAAAGGCGCGAAAAAGAAGATCATCGAATTTTTCACCCGCGTGG
GGTCGGCCTGGGTCAAGGCCTGGCGCGTGGCCCGCGGTTTGGTCCTGCGC
TCGAGGGCGCCCAACCCGATCGAACGCCTCCTCGCGCTCGTCCTCGCCCT
CGTCCTTAGCCCCCTGGCCGCCGTGGGGGACAAGCTCGTCTGGAGTAAAG
TGCGGGCAGGTCTGGGTGGGAGGATCAAGGTCTTGGTGGCCGGCGGGAGC
TCCATGCCTCTGGTCCTGGAGGACTTCTTCGAGCTCCTGCGGACGCCCGT
GATCGTGGGCTACGGGATGACGGAGACATCGCCGGTGATCACGAATCGCG
TGGCGGAAAAGAATTTGGCGGGCTCGGTGGGGCGGACGGCGCGAGACACG
GAGGTGAAGATTGTGGACCCGGAGTCGGGGGCCCGGTTGCCTGAGGGGCA
GCCGGGCTTGGTCTTGATGCGGGGTCCGCAGATGATGGCTGGCTACAAGA
GCAATGCGGAGGCGAGCAAGGCTGTCTTGGACCAGGAGGGCTTCCTGGAC
ACGGGGGACCTGGGCAGGATCCACCCTCTGACGAAGCACTTGATCATCAC
GGGCCGGGCCAAGGACACGATCGTCCTCAGCAACGGCGAGAACGTGGAGC
CGCAGCCCATCGAGGACGTGGTTTGCGCGAACTCAGCATTGGTAGACCAG
GTCATGTGCGTCGGGCAGGATGAGAAAGTGCTAGGGATGCTGGTGGTGCC
CAACGTGAGGGCCTTGGCGCGGGCGGGACTGGTGGACAGGGGCCTGGCCG
AGCGGGTGGCCGAGTTATTGGGAGGGCAGGTCCTGACGAACGGGATCGCG
GGGAGTCGAGCTGAGCTGGAGGAGGTGGAAGCCAGCCTGAGGGAGAAGAA
GGAGGTGAAGAAGGCGTTGCTGGCGGATATTGCGCGGGCGATGGGAAAGT
CGTTCAGGGAGACGGAGCGGGTAGGGGCGGTGGAGGTGGTGCTGGAACCC
TTCAACATGGCGAATGGTTTCTTGACACAGACCTTGAAGGTGAAGAGGAA
CGTGGTGAGCGGACACTACGCCCAGGAGATCGAGCAGATGTACCGATGAG
TTTGGACGGAGCAGGGAAATTGGTGTCTCAGGAGAAAAAGGAGGAGGAAA
GGCGTGTGTGTGGACGCACGGAGGGATTTGAGGGTGGTGGTGACGAAAGA
AGGGGATCAGACACTTAAGGAGCTTCTTTTATTTAAGGGCGAGAGCACGT
TTTCGAATAAAAGCGTATGAAAGAAAAAAATCATGAGGTCCACTAGTAAG
CAAAAAAATGTTGAAGCAAGCAAAGCCCCAGCGCAGTATAGAGCTTGTGT
GTGAGGACATGAGTATATCGGCTTCGATCAAATCGTTCCCTTGGTAATCT
TGTCTTGTACTCAGTCTCGCGGAAAAGTTAGCAACGCGACAGATCATGGG
CATCGAGATCAGATCCGTGTTAAGGAGACTGAAAAGGAAGAGGCAGGCCA
CGAACGTGATCTGTCAGCTGCTTGACACTGGTCTTTTCTGGCAAAGCATT
GGAC back to topCoding sequence (CDS) from alignment at CM002471.1:471016..473069- >rna7390 ID=rna7390|Name=rna7390|organism=Nannochloropsis gaditana|type=CDS|length=1599bp|location=Sequence derived from alignment at CM002471.1:471016..473069- (Nannochloropsis gaditana) ACCTTCCTCCCCCTCTCCCTTCCCCCCTCCCTCCTCCCTCTTGCAGAGCT GGCCAACCTGCCCCCTCCCACACAGGTGCTCACCTTCGACGAGGCCCTCT CCGCCTCCCTGGCCCGGCCCCTGACCTTCCGGCCCGTCCCTAAGGACGTG CGCTCTGTGGCCACCCTAGTCTACACGTCGGGGACCACCAACAAGCCCAA GGGCGTCGTCCTCCGGCACTCGAACCTGCTGCACCAGGTCAATTACAACT CCTTCACGGATTCCCCTTCCAAAGAGCCCGCCTACAACCCCGTCCTGGGT GATGTCCTCGTCTCGGTCCTTCCCTGCTGGCACATCTTCGAGCGCACCGC CGAGTACTGGATGTTCAGCAAGGGGATCCACGTCGTCTACTCAAACGTCA AGAACTTCAAGGCCGACCTGGCCAAGCACCAACCCCAATTCATCGTCGCA GTTCCCCGGCTCTTGGAAACGATTTACCGGGGCGTCTTGCAAAAGTTTGC TGCGGAAAAAGGCGCGAAAAAGAAGATCATCGAATTTTTCACCCGCGTGG GGTCGGCCTGGGTCAAGGCCTGGCGCGTGGCCCGCGGTTTGGTCCTGCGC TCGAGGGCGCCCAACCCGATCGAACGCCTCCTCGCGCTCGTCCTCGCCCT CGTCCTTAGCCCCCTGGCCGCCGTGGGGGACAAGCTCGTCTGGAGTAAAG TGCGGGCAGGTCTGGGTGGGAGGATCAAGGTCTTGGTGGCCGGCGGGAGC TCCATGCCTCTGGTCCTGGAGGACTTCTTCGAGCTCCTGCGGACGCCCGT GATCGTGGGCTACGGGATGACGGAGACATCGCCGGTGATCACGAATCGCG TGGCGGAAAAGAATTTGGCGGGCTCGGTGGGGCGGACGGCGCGAGACACG GAGGTGAAGATTGTGGACCCGGAGTCGGGGGCCCGGTTGCCTGAGGGGCA GCCGGGCTTGGTCTTGATGCGGGGTCCGCAGATGATGGCTGGCTACAAGA GCAATGCGGAGGCGAGCAAGGCTGTCTTGGACCAGGAGGGCTTCCTGGAC ACGGGGGACCTGGGCAGGATCCACCCTCTGACGAAGCACTTGATCATCAC GGGCCGGGCCAAGGACACGATCGTCCTCAGCAACGGCGAGAACGTGGAGC CGCAGCCCATCGAGGACGTGGTTTGCGCGAACTCAGCATTGGTAGACCAG GTCATGTGCGTCGGGCAGGATGAGAAAGTGCTAGGGATGCTGGTGGTGCC CAACGTGAGGGCCTTGGCGCGGGCGGGACTGGTGGACAGGGGCCTGGCCG AGCGGGTGGCCGAGTTATTGGGAGGGCAGGTCCTGACGAACGGGATCGCG GGGAGTCGAGCTGAGCTGGAGGAGGTGGAAGCCAGCCTGAGGGAGAAGAA GGAGGTGAAGAAGGCGTTGCTGGCGGATATTGCGCGGGCGATGGGAAAGT CGTTCAGGGAGACGGAGCGGGTAGGGGCGGTGGAGGTGGTGCTGGAACCC TTCAACATGGCGAATGGTTTCTTGACACAGACCTTGAAGGTGAAGAGGAA CGTGGTGAGCGGACACTACGCCCAGGAGATCGAGCAGATGTACCGATGA back to top
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