EWM23312.1, cds7369 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23312.1 vs. NCBI_GenBank
Match: gi|585104319|gb|EWM23312.1| (uv radiation resistance-associated protein [Nannochloropsis gaditana]) HSP 1 Score: 1115.52 bits (2884), Expect = 0.000e+0 Identity = 558/558 (100.00%), Postives = 558/558 (100.00%), Query Frame = 0 Query: 1 MPPSHPSSSPVADLHLSTFQPYSKRLLRQLRSISIRNLGISTDDVNSAPPPSTYIQVLAPPPPSSSPPSSSPPLTPLVAPQADFRVHYTSQVAPSTYNPTWLVLDLEPFAEHTDEEGKNKEGGCRPPSEAHGEEFCVRVFRAPGPYDEGVNVDRETLSDHFRERQNGKWRGWWPCQPATGESPLAEFVFRLPDVWCLPPSMKLAHLHLPCRHPSCLLATGEDGKGLLVSASVGVGLGLEGGGTDPAPYLLDEPYLAGLEELQHRPSFSPGFPSARASSVAGHGLPEGLASRDLAPEGRGPKDAPSPVPVWLRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRLLGEERAREESLLRKEFLVARRQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGVPTALLPGRKGVGGTGGQWGFLPDPPQGAHILQNLEALFTHELSQSFAFL 558 MPPSHPSSSPVADLHLSTFQPYSKRLLRQLRSISIRNLGISTDDVNSAPPPSTYIQVLAPPPPSSSPPSSSPPLTPLVAPQADFRVHYTSQVAPSTYNPTWLVLDLEPFAEHTDEEGKNKEGGCRPPSEAHGEEFCVRVFRAPGPYDEGVNVDRETLSDHFRERQNGKWRGWWPCQPATGESPLAEFVFRLPDVWCLPPSMKLAHLHLPCRHPSCLLATGEDGKGLLVSASVGVGLGLEGGGTDPAPYLLDEPYLAGLEELQHRPSFSPGFPSARASSVAGHGLPEGLASRDLAPEGRGPKDAPSPVPVWLRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRLLGEERAREESLLRKEFLVARRQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGVPTALLPGRKGVGGTGGQWGFLPDPPQGAHILQNLEALFTHELSQSFAFL Sbjct: 1 MPPSHPSSSPVADLHLSTFQPYSKRLLRQLRSISIRNLGISTDDVNSAPPPSTYIQVLAPPPPSSSPPSSSPPLTPLVAPQADFRVHYTSQVAPSTYNPTWLVLDLEPFAEHTDEEGKNKEGGCRPPSEAHGEEFCVRVFRAPGPYDEGVNVDRETLSDHFRERQNGKWRGWWPCQPATGESPLAEFVFRLPDVWCLPPSMKLAHLHLPCRHPSCLLATGEDGKGLLVSASVGVGLGLEGGGTDPAPYLLDEPYLAGLEELQHRPSFSPGFPSARASSVAGHGLPEGLASRDLAPEGRGPKDAPSPVPVWLRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRLLGEERAREESLLRKEFLVARRQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGVPTALLPGRKGVGGTGGQWGFLPDPPQGAHILQNLEALFTHELSQSFAFL 558
BLAST of EWM23312.1 vs. NCBI_GenBank
Match: gi|585104318|gb|EWM23311.1| (uv radiation resistance-associated protein [Nannochloropsis gaditana]) HSP 1 Score: 1067.76 bits (2760), Expect = 0.000e+0 Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 0 Query: 25 RLLRQLRSISIRNLGISTDDVNSAPPPSTYIQVLAPPPPSSSPPSSSPPLTPLVAPQADFRVHYTSQVAPSTYNPTWLVLDLEPFAEHTDEEGKNKEGGCRPPSEAHGEEFCVRVFRAPGPYDEGVNVDRETLSDHFRERQNGKWRGWWPCQPATGESPLAEFVFRLPDVWCLPPSMKLAHLHLPCRHPSCLLATGEDGKGLLVSASVGVGLGLEGGGTDPAPYLLDEPYLAGLEELQHRPSFSPGFPSARASSVAGHGLPEGLASRDLAPEGRGPKDAPSPVPVWLRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRLLGEERAREESLLRKEFLVARRQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGVPTALLPGRKGVGGTGGQWGFLPDPPQGAHILQNLEALFTHELSQSFAFL 558 RLLRQLRSISIRNLGISTDDVNSAPPPSTYIQVLAPPPPSSSPPSSSPPLTPLVAPQADFRVHYTSQVAPSTYNPTWLVLDLEPFAEHTDEEGKNKEGGCRPPSEAHGEEFCVRVFRAPGPYDEGVNVDRETLSDHFRERQNGKWRGWWPCQPATGESPLAEFVFRLPDVWCLPPSMKLAHLHLPCRHPSCLLATGEDGKGLLVSASVGVGLGLEGGGTDPAPYLLDEPYLAGLEELQHRPSFSPGFPSARASSVAGHGLPEGLASRDLAPEGRGPKDAPSPVPVWLRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRLLGEERAREESLLRKEFLVARRQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGVPTALLPGRKGVGGTGGQWGFLPDPPQGAHILQNLEALFTHELSQSFAFL Sbjct: 21 RLLRQLRSISIRNLGISTDDVNSAPPPSTYIQVLAPPPPSSSPPSSSPPLTPLVAPQADFRVHYTSQVAPSTYNPTWLVLDLEPFAEHTDEEGKNKEGGCRPPSEAHGEEFCVRVFRAPGPYDEGVNVDRETLSDHFRERQNGKWRGWWPCQPATGESPLAEFVFRLPDVWCLPPSMKLAHLHLPCRHPSCLLATGEDGKGLLVSASVGVGLGLEGGGTDPAPYLLDEPYLAGLEELQHRPSFSPGFPSARASSVAGHGLPEGLASRDLAPEGRGPKDAPSPVPVWLRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRLLGEERAREESLLRKEFLVARRQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGVPTALLPGRKGVGGTGGQWGFLPDPPQGAHILQNLEALFTHELSQSFAFL 554
BLAST of EWM23312.1 vs. NCBI_GenBank
Match: gi|298706671|emb|CBJ29600.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 117.857 bits (294), Expect = 1.052e-27 Identity = 59/113 (52.21%), Postives = 81/113 (71.68%), Query Frame = 0 Query: 399 IYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDATVGYPV-FPLYRRGVERERFEWAIYLLRKDIQGLLHARGVP 510 IYPI+ +E+ IRGLELPAD+ DDE ++SALGY H++ ML+KYL++ LRY + ASRS +RD G V +PL+RRGVE+ERF+ +YLL +D++ +L ARGVP Sbjct: 5 IYPIKYQGNLKEFTIRGLELPADLYSI--DDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASRSAVRDNVTGVGVAYPLFRRGVEKERFDRGVYLLGRDVEQILTARGVP 115
BLAST of EWM23312.1 vs. NCBI_GenBank
Match: gi|1183330986|gb|ORX60724.1| (hypothetical protein DM01DRAFT_1332846 [Hesseltinella vesiculosa]) HSP 1 Score: 120.553 bits (301), Expect = 4.207e-25 Identity = 77/221 (34.84%), Postives = 126/221 (57.01%), Query Frame = 0 Query: 311 LRTEARRLEALLEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMG-FGERL------AGATRRLLGEERA---REESLLRK--------EFLVARRQQRLVAGLRRIYPIEQGAGE-QEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRD---ATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGV 509 L T A R++ + E + ++E L ++ +D + + + ++ +RL ATR+ +E+ E LL K + + RQ+ L+A L IYPIEQ + Q++RIRGL LP + V+A D+EVVA+ALG+ H++ ML+ YL +PLRY ++P SR+ I D G FPLY +GV++ RFE+ ++LL K+I+ +++A G+ Sbjct: 289 LDTNAVRMQLMRERSQKETRLKE--LEKQAQDKKAHLDLAHDKVHQLRKRLQSRRCEINATRQRFSQEQKDLDNNERLLSKNTRMYHDTQVDLNLRQKELIADLFSIYPIEQSFDDFQQFRIRGLYLP-NSVYAGCDEEVVATALGFTAHLVSMLAYYLAIPLRYPIDPMGSRASIHDPVSMIHGSRTFPLYSKGVDKYRFEFGVFLLNKNIEQMMNAYGL 506
BLAST of EWM23312.1 vs. NCBI_GenBank
Match: gi|510999964|gb|EPB81539.1| (hypothetical protein HMPREF1544_11750 [Mucor circinelloides f. circinelloides 1006PhL] >gi|511000114|gb|EPB81676.1| hypothetical protein HMPREF1544_11593 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 120.168 bits (300), Expect = 5.625e-25 Identity = 59/129 (45.74%), Postives = 91/129 (70.54%), Query Frame = 0 Query: 385 VARRQQRLVAGLRRIYPIEQGAGE-QEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDAT---VGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGV 509 + RR++ L+A L IYPIEQ + Q++RIRG+ LP + V+ ++DE++A+ALG+ H++ ML+ YLE+PLRY P +SRS I+D G FPLY +GV+R RFE+ ++LL K+I+ L++A G+ Sbjct: 381 LNRRKKELIADLFSIYPIEQSYDDSQQFRIRGIYLP-NSVYDGQNDEMIATALGFTAHLVSMLAYYLEIPLRYPTTPMSSRSTIKDLVSLISGSRDFPLYAKGVDRYRFEFGVFLLNKNIEQLMNAYGL 508
BLAST of EWM23312.1 vs. NCBI_GenBank
Match: gi|758363817|emb|CEP13861.1| (hypothetical protein [Parasitella parasitica]) HSP 1 Score: 117.857 bits (294), Expect = 3.209e-24 Identity = 58/129 (44.96%), Postives = 90/129 (69.77%), Query Frame = 0 Query: 385 VARRQQRLVAGLRRIYPIEQGAGE-QEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDAT---VGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGV 509 + RR++ L+A L IYPIEQ + Q++RIRG+ LP + V+ ++D+++A+ALG+ H++ ML+ YLE+PLRY P +SRS I D G FPLY +GV+R RFE+ ++LL K+I+ L++A G+ Sbjct: 376 LNRRRKELIADLFSIYPIEQSYDDSQQFRIRGIYLP-NSVYDGQNDDMIATALGFTAHLVSMLAYYLEIPLRYPTTPMSSRSTITDLVSLISGSREFPLYAKGVDRYRFEFGVFLLNKNIEQLMNAYGL 503
BLAST of EWM23312.1 vs. NCBI_GenBank
Match: gi|1026269015|gb|OAD02113.1| (hypothetical protein MUCCIDRAFT_164051 [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 117.087 bits (292), Expect = 5.462e-24 Identity = 63/149 (42.28%), Postives = 98/149 (65.77%), Query Frame = 0 Query: 367 LLGEERAREESLLRKEFL---VARRQQRLVAGLRRIYPIEQGAGEQEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRDAT---VGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGV 509 L ER E+++ ++ + + RR++ L+A L IYPIEQ +RIRG+ LP + V+ ++DE++A+ALG+ H++ ML+ YLE+PLRY P +SRS IRD G FPLY +GV+R RFE+ ++LL K+I+ L++A G+ Sbjct: 365 LQENERVLEKNIHMRQTMFHTLNRRKKELIADLFSIYPIEQ------FRIRGIYLP-NSVYDGQNDEMIATALGFTAHLVSMLAYYLEIPLRYPTTPMSSRSTIRDLVSLISGSRDFPLYAKGVDRYRFEFGVFLLNKNIEQLMNAYGL 506
BLAST of EWM23312.1 vs. NCBI_GenBank
Match: gi|671691055|emb|CDS05793.1| (hypothetical protein LRAMOSA08321 [Lichtheimia ramosa]) HSP 1 Score: 116.316 bits (290), Expect = 1.100e-23 Identity = 78/202 (38.61%), Postives = 119/202 (58.91%), Query Frame = 0 Query: 322 LEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRL-LGE------ERAREESLLRKEFL---VARRQQRLVAGLRRIYPIEQGAGE-QEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRD---ATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGV 509 LE EG + VE+ A E D R + + E +L AT RL LG+ E E S+ + L + RR++ L+A L IYPIEQ + ++ IRG+ LP + V+ +DE +A+ALG+ H++ ML+ YL +PLRY + P +SR+ I+D + G +FPLY +GV+R RFE+ ++LL KDI+ L++A G+ Sbjct: 275 LEGIEGQI-VEKNA--EIRRDRRRIAELRETLERRRSKLDEATERLRLGQQDLQDSEEVLERSVQTHQRLFHKLNRRKKELIADLFSIYPIEQSLHDVHQFCIRGVYLP-NSVYTGCNDESIATALGFTAHLVSMLAFYLSIPLRYPITPMSSRATIKDPVSSINGPTIFPLYAKGVDRYRFEFGVFLLNKDIEQLMNAYGL 472
BLAST of EWM23312.1 vs. NCBI_GenBank
Match: gi|661180301|emb|CDH57106.1| (uv radiation resistance protein [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 113.62 bits (283), Expect = 8.664e-23 Identity = 74/202 (36.63%), Postives = 115/202 (56.93%), Query Frame = 0 Query: 322 LEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRL-LGE------ERAREESLLRKEFL---VARRQQRLVAGLRRIYPIEQGAGE-QEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRD---ATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGV 509 LE EG + + E D R + + E +L AT RL LG+ E E S+ + L + RR++ L+A L IYPIEQ + ++ IRG+ LP + V+ +DE +A+ALG+ H++ ML+ YL +PLRY + P +SR+ I+D + G FPLY +GV+R RFE+ ++LL K+I+ L++A G+ Sbjct: 374 LEGIEGQIVKKN---TEIRRDRRRIAELRETLERRKSKLNEATERLRLGQQDLQDSEEVLERSVQTHQRLFHKLNRRKKELIADLFSIYPIEQSLHDVHQFCIRGVYLP-NSVYTGCNDESIATALGFTAHLVSMLAFYLSIPLRYPITPMSSRATIKDPVSSINGPTTFPLYAKGVDRYRFEFGVFLLNKNIEQLMNAYGL 571
BLAST of EWM23312.1 vs. NCBI_GenBank
Match: gi|661180300|emb|CDH57105.1| (uv radiation resistance protein [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 113.62 bits (283), Expect = 9.493e-23 Identity = 74/202 (36.63%), Postives = 115/202 (56.93%), Query Frame = 0 Query: 322 LEAEEGALAVEEEALVEEEEDLRGLVAMVEAEMGFGERLAGATRRL-LGE------ERAREESLLRKEFL---VARRQQRLVAGLRRIYPIEQGAGE-QEYRIRGLELPADVVHAPKDDEVVASALGYVCHVLVMLSKYLEVPLRYALEPRASRSLIRD---ATVGYPVFPLYRRGVERERFEWAIYLLRKDIQGLLHARGV 509 LE EG + + E D R + + E +L AT RL LG+ E E S+ + L + RR++ L+A L IYPIEQ + ++ IRG+ LP + V+ +DE +A+ALG+ H++ ML+ YL +PLRY + P +SR+ I+D + G FPLY +GV+R RFE+ ++LL K+I+ L++A G+ Sbjct: 375 LEGIEGQIVKKN---TEIRRDRRRIAELRETLERRKSKLNEATERLRLGQQDLQDSEEVLERSVQTHQRLFHKLNRRKKELIADLFSIYPIEQSLHDVHQFCIRGVYLP-NSVYTGCNDESIATALGFTAHLVSMLAFYLSIPLRYPITPMSSRATIKDPVSSINGPTTFPLYAKGVDRYRFEFGVFLLNKNIEQLMNAYGL 572 The following BLAST results are available for this feature:
BLAST of EWM23312.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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