EWM23313.1, cds7346 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23313.1 vs. NCBI_GenBank
Match: gi|585104320|gb|EWM23313.1| (Chalcone isomerase, subgroup [Nannochloropsis gaditana]) HSP 1 Score: 433.335 bits (1113), Expect = 2.088e-153 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0 Query: 1 MGRLSLACCVSALLALTTYAMIEPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKAGSKALFDALETGNFDKIVLLKMARKVGAATLVNALAESVKPRLGKGSEAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTINGKKQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGLLTWINLVK 221 MGRLSLACCVSALLALTTYAMIEPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKAGSKALFDALETGNFDKIVLLKMARKVGAATLVNALAESVKPRLGKGSEAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTINGKKQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGLLTWINLVK Sbjct: 1 MGRLSLACCVSALLALTTYAMIEPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKAGSKALFDALETGNFDKIVLLKMARKVGAATLVNALAESVKPRLGKGSEAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTINGKKQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGLLTWINLVK 221
BLAST of EWM23313.1 vs. NCBI_GenBank
Match: gi|553194490|ref|XP_005855968.1| (hypothetical protein NGA_0361402 [Nannochloropsis gaditana CCMP526] >gi|422293076|gb|EKU20377.1| hypothetical protein NGA_0361402 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 391.734 bits (1005), Expect = 2.813e-137 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 Query: 21 MIEPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKAGSKALFDALETGNFDKIVLLKMARKVGAATLVNALAESVKPRLGKGSEAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTINGKKQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGLLTWINLVK 221 MIEPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKAGSKALFDALETGNFDKIVLLKMARKVGAATLVNALAESVKPRLGKGSEAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTINGKKQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGLLTWINLVK Sbjct: 1 MIEPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKAGSKALFDALETGNFDKIVLLKMARKVGAATLVNALAESVKPRLGKGSEAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTINGKKQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGLLTWINLVK 201
BLAST of EWM23313.1 vs. NCBI_GenBank
Match: gi|298707876|emb|CBJ30273.1| (Chalcone Isomerase [Ectocarpus siliculosus]) HSP 1 Score: 154.066 bits (388), Expect = 3.500e-43 Identity = 96/198 (48.48%), Postives = 125/198 (63.13%), Query Frame = 0 Query: 21 MIEPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKAGS----KALFDALETGNFDKIVLLKMARKVGAATLVNALAESVKPRLGKGSEAALLQFQDVLLAGL-KGGEAETGKQFGFGIQGGSKLIVTINGKKQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGL 213 + E ATKI F E +SLPG +G SL G GVRVKK +GP VKVY VGLYVD+ A ++L KG S F + NF+K ++LKMAR+VG +V+ALAESVKPR+ GS+ L FQD+LL + K G A+ G QFGF + G+ L V++NGK G I SGPL+ A++ YL AVS K++ A G+ Sbjct: 33 VTERATKISFREKVSLPGG-SGSSLMGTGVRVKK-IGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGESLGKNDGFFTRVAKSNFEKTMVLKMAREVGTEKMVSALAESVKPRI-SGSKKPLDSFQDILLKAVGKEGAAKKGMQFGFVCKPGA-LCVSVNGKDAGTIKSGPLSSAMVDVYLGKKAVSPGAKKAFATGV 226
BLAST of EWM23313.1 vs. NCBI_GenBank
Match: gi|926790903|ref|XP_013903925.1| (hypothetical protein MNEG_3049 [Monoraphidium neglectum] >gi|761974872|gb|KIZ04906.1| hypothetical protein MNEG_3049 [Monoraphidium neglectum]) HSP 1 Score: 97.8265 bits (242), Expect = 5.110e-21 Identity = 69/198 (34.85%), Postives = 107/198 (54.04%), Query Frame = 0 Query: 22 IEPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKAGS----KALFDALETG-NFDKIVLLKMAR-KVGAATLVNALAESVKPRLGKGSEAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTINGKKQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGL 213 +EPAT I + + + + LAGVGVR K+++G + VY +GLYVD A + L K+KG + + +A FDA+ T +F++ + L ++ + A VNAL E + P L K ++ +++ + L G + G F G KL+ I+G++ G I S L +AL YL ++AVS D K S AQGL Sbjct: 73 VEPATGIDYPDNLCVITKNHCPGLAGVGVRAKRVLGLKNINVYALGLYVDAHGAKKALGKWKGSSSDTLLTNQAAFDAITTAESFERSLRLVISFGSLKRAQFVNALEERLAPPLNKAGKSDVMKSFERLF---DGASFKKGTAIDFSASGKGKLVTKIDGQQVGTIESPELVKALFDIYLGSDAVSADAKASFAQGL 267
BLAST of EWM23313.1 vs. NCBI_GenBank
Match: gi|1026073504|ref|XP_016581062.1| (PREDICTED: fatty-acid-binding protein 3, chloroplastic isoform X2 [Capsicum annuum]) HSP 1 Score: 93.5893 bits (231), Expect = 1.677e-19 Identity = 65/203 (32.02%), Postives = 105/203 (51.72%), Query Frame = 0 Query: 23 EPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKAGS----KALFDALETGNFDKIVLLKMARKVGAATLVNALAESVKPRLGKGS---EAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTIN-----GKKQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGL 213 EPATK+KF+ ++SLPGS LSL G G R +K+ + +KVY GLYV+ V R L ++G A +LF+ + N +K +L+ + R + T +AL E++ PR+ + ++AL F+DV +G + +K++V+++ I S +A AL +L + VS +K SVA+GL Sbjct: 73 EPATKVKFQRSLSLPGSSTSLSLLGTGYR-EKVFAIIGIKVYAAGLYVNDSVFSR-LDAWRGRSAAEIQQVPSLFNNIFEANLEKSLLIVLVRDIDGKTFWDALDEAISPRIKSPTADDKSALSTFRDV----FQGKPLKKETSIFLTWIDPTKMLVSLSFDGMPSSVDATIESTNVASALFDVFLGGDPVSPTLKASVAKGL 269
BLAST of EWM23313.1 vs. NCBI_GenBank
Match: gi|1000947943|ref|XP_015580422.1| (PREDICTED: fatty-acid-binding protein 3, chloroplastic [Ricinus communis]) HSP 1 Score: 92.4337 bits (228), Expect = 4.577e-19 Identity = 66/207 (31.88%), Postives = 106/207 (51.21%), Query Frame = 0 Query: 21 MIEPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKA----GSKALFDALETGNFDKIVLLKMARKVGAATLVNALAESVKPRLGKGS---EAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTINGK-----KQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGLLT 215 M EPAT +KF+ +ISLPG + LSL G G R +K+ + VKVY GLYV++ + + L+ +KG A G+ ALF ++ + +K +L+ + R V T +AL +++ PR+ + E+AL F+ + +G + G SK+++ I+ I S + AL + + VS +K SVA GL T Sbjct: 74 MEEPATAVKFQTSISLPGCSSSLSLLGTGYR-EKVFAIIGVKVYAAGLYVNQSI-LSALNAWKGQSATEIQGNPALFSSIFQASSEKSLLIVLVRDVDGKTFWDALDDAISPRIEAPTPVDESALSTFRSI----FQGRPLKKGTFIFLTWLDPSKMLICISSDGMQATVDATIESTNVTFALFDVFFSDAPVSPSLKASVANGLAT 274
BLAST of EWM23313.1 vs. NCBI_GenBank
Match: gi|1044575328|ref|XP_017424354.1| (PREDICTED: fatty-acid-binding protein 3, chloroplastic [Vigna angularis] >gi|920699444|gb|KOM42669.1| hypothetical protein LR48_Vigan05g027300 [Vigna angularis] >gi|965606032|dbj|BAT93208.1| hypothetical protein VIGAN_07213500 [Vigna angularis var. angularis]) HSP 1 Score: 90.8929 bits (224), Expect = 1.814e-18 Identity = 65/203 (32.02%), Postives = 105/203 (51.72%), Query Frame = 0 Query: 23 EPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHK----AGSKALFDALETGNFDKIVLLKMARKVGAATLVNALAESVKPRLGKGS---EAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTI--NGKK---QGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGL 213 EPATK+KF+ ++ PG L+L G G R +K+ + VKVY GLY+D+ + +L+ +KG G+ +LF + +F+K + + + R V T +AL++++ PR+ + E AL F+ V L + G +KL+V++ NG I S +A AL +L +N VS +K SVA+GL Sbjct: 80 EPATKVKFQTCLNFPGCSNSLTLFGAGYR-EKVFAIIGVKVYAAGLYLDQSI-TPELNAWKGLSKDAIQGNSSLFQTIFQSSFEKSLQIILVRDVDGQTFWDALSDAIAPRIPASTSVDETALTTFRGVFL----DRPLKKGTFILLTWLNPTKLLVSVSPNGFPSTVDATIESANVASALFNVFLGDNPVSHSLKSSVAEGL 276
BLAST of EWM23313.1 vs. NCBI_GenBank
Match: gi|1111119396|ref|XP_019249623.1| (PREDICTED: fatty-acid-binding protein 3, chloroplastic [Nicotiana attenuata] >gi|1102143958|gb|OIT00311.1| fatty-acid-binding protein 3, chloroplastic [Nicotiana attenuata]) HSP 1 Score: 90.1225 bits (222), Expect = 4.336e-18 Identity = 64/203 (31.53%), Postives = 103/203 (50.74%), Query Frame = 0 Query: 23 EPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKAGS----KALFDALETGNFDKIVLLKMARKVGAATLVNALAESVKPRLGKGS---EAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTIN-----GKKQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGL 213 EPATK+KF+ ++SLPG LSL G G R +K+ + VKVY GLYV+ V R L ++GH A + +LF+ + N +K + + + R + T +AL E++ PR+ + ++AL F+ V +G + +K++V+++ I S +A AL +L + VS +K SVA GL Sbjct: 81 EPATKVKFQRSLSLPGCSTSLSLLGTGYR-EKVFAIIGVKVYAAGLYVNDSVFSR-LDDWRGHSAAAIQQDTSLFNMIFEANLEKSLRIVLVRDIDGKTFWDALDEAISPRIKSPTAEDKSALSTFRGV----FQGKPLKKETSIFLTWIDPTKMLVSLSFDGTPSSVDATIESTNVASALFDVFLGGDPVSPSLKASVANGL 277
BLAST of EWM23313.1 vs. NCBI_GenBank
Match: gi|1026073502|ref|XP_016581060.1| (PREDICTED: fatty-acid-binding protein 3, chloroplastic isoform X1 [Capsicum annuum]) HSP 1 Score: 89.7373 bits (221), Expect = 6.544e-18 Identity = 65/213 (30.52%), Postives = 105/213 (49.30%), Query Frame = 0 Query: 23 EPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKAGS--------------KALFDALETGNFDKIVLLKMARKVGAATLVNALAESVKPRLGKGS---EAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTIN-----GKKQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGL 213 EPATK+KF+ ++SLPGS LSL G G R +K+ + +KVY GLYV+ V R L ++G A +LF+ + N +K +L+ + R + T +AL E++ PR+ + ++AL F+DV +G + +K++V+++ I S +A AL +L + VS +K SVA+GL Sbjct: 73 EPATKVKFQRSLSLPGSSTSLSLLGTGYR-EKVFAIIGIKVYAAGLYVNDSVFSR-LDAWRGRSAAEIQQAPSFAAEIQQVPSLFNNIFEANLEKSLLIVLVRDIDGKTFWDALDEAISPRIKSPTADDKSALSTFRDV----FQGKPLKKETSIFLTWIDPTKMLVSLSFDGMPSSVDATIESTNVASALFDVFLGGDPVSPTLKASVAKGL 279
BLAST of EWM23313.1 vs. NCBI_GenBank
Match: gi|1109238085|ref|XP_019193718.1| (PREDICTED: fatty-acid-binding protein 3, chloroplastic isoform X1 [Ipomoea nil]) HSP 1 Score: 89.3521 bits (220), Expect = 7.673e-18 Identity = 62/203 (30.54%), Postives = 98/203 (48.28%), Query Frame = 0 Query: 23 EPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKA----GSKALFDALETGNFDKIVLLKMARKVGAATLVNALAESVKPRLGKGS---EAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTINGKK-----QGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGL 213 EP T +KF+ ++SLPG LSL G G R +K+ + VKVY GLYV++ + + KL ++G A LF+ + +K + + + R V T +AL E++ PR+ S E AL F+ + +G + G +K++V ++ +I S + AL +L N VS +K SVA GL Sbjct: 84 EPTTNVKFQRSLSLPGCCTSLSLLGTGYR-EKVFAIIGVKVYAAGLYVNESI-LNKLDAWRGRSAAELQNDSPLFETIFKAPLEKSLSIVLVRDVDGKTFWDALDEAISPRIKSPSADDETALSTFRTI----FQGRPLKKGTFIVLTWVDPTKMLVCVSSDATPSSIDAKIESANVTSALFDVFLGRNPVSPSLKASVANGL 280 The following BLAST results are available for this feature:
BLAST of EWM23313.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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