EWM23305.1, cds7332 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23305.1 vs. NCBI_GenBank
Match: gi|585104312|gb|EWM23305.1| (SNARE associated Golgi protein [Nannochloropsis gaditana]) HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0
Query: 1 MDHPGNEDNVISSNGTSAASDDANAPSDQIKQKPGYYSFPQLKSEPPTKSWTSKARIWIFILFLVTFAVLSATVLRQPIMDSERWLKRQGLNGLVVYGIVSWAFLMIGGSANLIDLISGFVYGSRQGLAMAYVVKLLATICAYLAGRYLFRDLLVTYFFKEYVWLAAMVRLVEERPWQSNVLIRLAAIPAAVKSYGLGAIEDPPIPFFSCAIVIMAPLSWILTDLGAKLQDPKDIFKAKSEGSQILEIVGITCIFLVLVCGAWFGRKYVREIKAEKEAEMSAVQSVAAGCADVESAQEDGNTPPEAEEEILFNTKDLATSSIAASTPAVA 330
MDHPGNEDNVISSNGTSAASDDANAPSDQIKQKPGYYSFPQLKSEPPTKSWTSKARIWIFILFLVTFAVLSATVLRQPIMDSERWLKRQGLNGLVVYGIVSWAFLMIGGSANLIDLISGFVYGSRQGLAMAYVVKLLATICAYLAGRYLFRDLLVTYFFKEYVWLAAMVRLVEERPWQSNVLIRLAAIPAAVKSYGLGAIEDPPIPFFSCAIVIMAPLSWILTDLGAKLQDPKDIFKAKSEGSQILEIVGITCIFLVLVCGAWFGRKYVREIKAEKEAEMSAVQSVAAGCADVESAQEDGNTPPEAEEEILFNTKDLATSSIAASTPAVA
Sbjct: 1 MDHPGNEDNVISSNGTSAASDDANAPSDQIKQKPGYYSFPQLKSEPPTKSWTSKARIWIFILFLVTFAVLSATVLRQPIMDSERWLKRQGLNGLVVYGIVSWAFLMIGGSANLIDLISGFVYGSRQGLAMAYVVKLLATICAYLAGRYLFRDLLVTYFFKEYVWLAAMVRLVEERPWQSNVLIRLAAIPAAVKSYGLGAIEDPPIPFFSCAIVIMAPLSWILTDLGAKLQDPKDIFKAKSEGSQILEIVGITCIFLVLVCGAWFGRKYVREIKAEKEAEMSAVQSVAAGCADVESAQEDGNTPPEAEEEILFNTKDLATSSIAASTPAVA 330
BLAST of EWM23305.1 vs. NCBI_GenBank
Match: gi|953502243|emb|CEG36628.1| (atp-binding cassette superfamily [Plasmopara halstedii]) HSP 1 Score: 75.0998 bits (183), Expect = 7.994e-12 Identity = 53/202 (26.24%), Postives = 102/202 (50.50%), Query Frame = 0
Query: 84 RWLKRQGLNGLVVYGIVSWAFLMIGGSANLIDLISGFVYGSRQGLAMAYVVKLLATICAYLAGRYLFRDLLVTYFFKEYVWLAAMVRLVEERPWQSNVLIRLAAIPAAVKSYGLGAIEDPPIPFFSCAIVIMAPLSWILTDLGAKLQDPKDIF------KAKSEGSQILEIVGITCIFLVLVCGAWFGRKYVREIKAEKEAE 279
+WL+ G +Y F+++ + + +L++G+++G GL +A KLL ++ +Y+ GRY+ R + +Y + + L L+ +R L R+A P A+K+YGL ++ +F+ A++ P S+I G +++ + + +EG IL +VG L+L ++ RKYV E+ E++ E
Sbjct: 67 QWLQVHEALGAALYVCSFTCFVVLCFPSTVFELLAGYIFGLWLGLLLATTGKLLGSVLSYVIGRYMCRHRVHSYMARGHPALQGFQSLLRKRQILIVFLTRVAFFPIAIKNYGLSVLDVRFSVYFAAALLTGLPFSFIWVYSGHAVENVAALLVSPTASRHSTEG--ILLLVGAGSALLLLFMVGYYSRKYVLELAKEEQDE 266
BLAST of EWM23305.1 vs. NCBI_GenBank
Match: gi|1214673528|gb|OWY96302.1| (ABC transporter [Phytophthora megakarya]) HSP 1 Score: 73.9442 bits (180), Expect = 2.145e-11 Identity = 54/201 (26.87%), Postives = 97/201 (48.26%), Query Frame = 0
Query: 84 RWLKRQGLNGLVVYGIVSWAFLMIGGSANLIDLISGFVYGSRQGLAMAYVVKLLATICAYLAGRYLFRDLLVTYFFKEYVWLAAMVRLVEERPWQSNVLIRLAAIPAAVKSYGLGAIEDPPIPFFSCAIVIMAPLS--WILT-----DLGAKLQDPKDIFKAKSEGSQILEIVGITCIFLVLVCGAWFGRKYVREIKAEKE 277
RWL+ G +Y F+++ + +L++G+++G GL +A + KL+ ++ +Y GRYL R + TY + + L RL+ +R L R+A P AVK+YGL ++ +F+ A++ P S W+ + + A L P ++ +L ++G L+L + RKYV E+ E+
Sbjct: 61 RWLQTHEAIGAALYVSCFTCFVVLCFPSTAFELLAGYIFGFWLGLLLASMGKLVGSMISYGIGRYLCRRRVHTYMARGHPTLQGFQRLLRKRQILVVFLTRVAFFPIAVKNYGLSVLDVRFPVYFAAALLTGLPFSVIWVYSGHAVENFSALLASPAT---SRHSTEMVLLLIGTGSALLLLFVVGIYTRKYVLELAQEEN 258
BLAST of EWM23305.1 vs. NCBI_GenBank
Match: gi|673030216|ref|XP_008869069.1| (hypothetical protein H310_05973 [Aphanomyces invadans] >gi|574475464|gb|ETW02464.1| hypothetical protein H310_05973 [Aphanomyces invadans]) HSP 1 Score: 73.1738 bits (178), Expect = 3.566e-11 Identity = 67/268 (25.00%), Postives = 121/268 (45.15%), Query Frame = 0
Query: 20 SDDANAPSDQIKQKPGYYSFPQLKSEPPTKSWTSKARIWIFILFLVTFAV----LSATVLRQPIMDSERWLKRQGLNGLVVYGIVSWAFLMIGGSANLIDLISGFVYGSRQGLAMAYVVKLLATICAYLAGRYLFRDLLVTYFFKEYVWLAAMVRLVEERPWQSNVLIRLAAIPAAVKSYGLGAIEDPPIPFFSCAIVIMAPLSWILTDLGAKLQDPKDIFKAKSE------GSQILEIVGITCIFLVLVCGAWFGRKYVREIKAEKE 277
DDANA + Y S P + P +S + + IL +V V L A Q + RW + + G ++Y + A +++ + + DL++G+++G G A+A K L ++ A+L GRY+ D + + L A L+E Q +L++ A IP +K+YGL P F +VI +W+ +G +I + + ++L IV + L+ V G++ ++Y+ E+ A++E
Sbjct: 6 GDDANAV------RLTYQSIPMGERAAPKESSPRTSHVLAGILAVVFCVVVILSLWAFAQTQAFRELVRWEQDHQVLGGLIYVLFYAACVVLCCPSTIFDLLAGYIFGFGFGTAVAMGGKTLGSVVAFLLGRYVMHDTIRRKLTEGPPVLRAWALLLERNELQFVLLLQFAYIPIFLKNYGLAVAGVPFGLFLWTNVVIGGARTWLAVYIGHSTAHITEILTSHAARGDARVAQEVLMIVAVVSTLLLFVVGSYRTKQYLDEL-ADRE 266
BLAST of EWM23305.1 vs. NCBI_GenBank
Match: gi|970642700|gb|KUF84275.1| (ABC transporter G family member 35 [Phytophthora nicotianae]) HSP 1 Score: 74.7146 bits (182), Expect = 5.411e-11 Identity = 51/198 (25.76%), Postives = 97/198 (48.99%), Query Frame = 0
Query: 84 RWLKRQGLNGLVVYGIVSWAFLMIGGSANLIDLISGFVYGSRQGLAMAYVVKLLATICAYLAGRYLFRDLLVTYFFKEYVWLAAMVRLVEERPWQSNVLIRLAAIPAAVKSYGLGAIEDPPIPFFSCAIVIMAPLSWILTDLGAKLQDPKDIF----KAKSEGSQILEIVGITCIFLVLVCGAWFGRKYVREIKAEKE 277
+WL+ G +Y F+++ + +L++G+++G GL +A KL+ ++ +Y+ GRYL R + Y + + L L+ +R L R+A P AVK+YGL ++ +F+ A++ P S+I G +++ + A+ IL +VG L+L ++ RKYV ++ E++
Sbjct: 61 QWLQTHETLGAALYVCSFTCFVVLCFPSTAFELLAGYIFGLWLGLLLATTGKLVGSVLSYVIGRYLCRRRVHAYMAQGHPALQGFQSLLRKRQILVVFLTRVAFFPIAVKNYGLSVLDVRFPVYFAAALLTGLPFSFIWVYSGHAVENFTALLASPTAARHSTEMILLLVGAGSALLLLFVVGFYTRKYVLDLAEEEK 258
BLAST of EWM23305.1 vs. NCBI_GenBank
Match: gi|970636211|gb|KUF80926.1| (prenyltransferase alpha subunit repeat-containing protein 1 protein [Phytophthora nicotianae]) HSP 1 Score: 73.9442 bits (180), Expect = 8.870e-11 Identity = 51/198 (25.76%), Postives = 97/198 (48.99%), Query Frame = 0
Query: 84 RWLKRQGLNGLVVYGIVSWAFLMIGGSANLIDLISGFVYGSRQGLAMAYVVKLLATICAYLAGRYLFRDLLVTYFFKEYVWLAAMVRLVEERPWQSNVLIRLAAIPAAVKSYGLGAIEDPPIPFFSCAIVIMAPLSWILTDLGAKLQDPKDIF----KAKSEGSQILEIVGITCIFLVLVCGAWFGRKYVREIKAEKE 277
+WL+ G +Y F+++ + +L++G+++G GL +A KL+ ++ +Y+ GRYL R + Y + + L L+ +R L R+A P AVK+YGL ++ +F+ A++ P S+I G +++ + A+ IL +VG L+L ++ RKYV ++ E++
Sbjct: 61 QWLQTHETLGAALYVCSFTCFVVLCFPSTAFELLAGYIFGLWLGLLLATTGKLVGSVLSYVIGRYLCRRRVHAYMAQGHPALQGFQSLLRKRQILVVFLTRVAFFPIAVKNYGLSVLDVRFPVYFAAALLTGLPFSFIWVYSGHAVENFTALLASPTAARHSTEMILLLVGAGSALLLLFVVGFYTRKYVLDLAEEEK 258
BLAST of EWM23305.1 vs. NCBI_GenBank
Match: gi|698787684|ref|XP_009826874.1| (hypothetical protein H257_04171 [Aphanomyces astaci] >gi|574117963|gb|ETV83444.1| hypothetical protein H257_04171 [Aphanomyces astaci]) HSP 1 Score: 71.633 bits (174), Expect = 1.183e-10 Identity = 59/256 (23.05%), Postives = 117/256 (45.70%), Query Frame = 0
Query: 30 IKQKPGYYSFP---QLKSEPPTKSWTSKARIWIFILFLVTFAVLSATVLRQPIMDSERWLKRQGLNGLVVYGIVSWAFLMIGGSANLIDLISGFVYGSRQGLAMAYVVKLLATICAYLAGRYLFRDLLVTYFFKEYVWLAAMVRLVEERPWQSNVLIRLAAIPAAVKSYGLGAIEDPPIPFFSCAIVIMAPLSWILTDLGAKLQDPKDIFKAKSE------GSQILEIVGITCIFLVLVCGAWFGRKYVREIKAEK 276
+ + P Y S P + EP ++ L LV L A Q D RW + ++G ++Y ++ A +++ + ++DL++G+++G G A+A + L ++ A+L GRY+ +D + L A L+E Q VL++ A IP VK+YGL A+ + F V+ + + +G ++ K+ + ++L +V + L++ G++ ++Y+ E+ A +
Sbjct: 1 MGEHPTYDSIPMAVESSKEPSSRCSNVLVSTVAGALCLVVVVGLWAFTQTQTFRDLVRWEQTHQVSGGLIYVLIYAACVILCCPSTVLDLLAGYIFGFGVGTAVAVGGRTLGSVAAFLLGRYVMQDTVRQKLHDGQPMLRAWALLLERNEIQFVVLVQFAYIPLFVKNYGL-ALLNVSFGLFLWTHVVCGVRTLLTVYIGHSATHMTELLKSHAASGDTVIAQEMLMVVAVVSTLLLVAVGSYRTKQYLDELAASE 255
BLAST of EWM23305.1 vs. NCBI_GenBank
Match: gi|675207319|ref|XP_008912544.1| (hypothetical protein PPTG_16793 [Phytophthora parasitica INRA-310] >gi|566013846|gb|ETI36757.1| hypothetical protein F443_17187 [Phytophthora parasitica P1569] >gi|567951248|gb|ETK76951.1| hypothetical protein L915_16727 [Phytophthora parasitica] >gi|567979907|gb|ETL30379.1| hypothetical protein L916_16636 [Phytophthora parasitica] >gi|568009408|gb|ETL83611.1| hypothetical protein L917_16456 [Phytophthora parasitica] >gi|568039318|gb|ETM36814.1| hypothetical protein L914_16562 [Phytophthora parasitica] >gi|568087287|gb|ETN02161.1| hypothetical protein PPTG_16793 [Phytophthora parasitica INRA-310] >gi|570317508|gb|ETO65456.1| hypothetical protein F444_17228 [Phytophthora parasitica P1976] >gi|570941298|gb|ETP06555.1| hypothetical protein F441_17060 [Phytophthora parasitica CJ01A1] >gi|570971530|gb|ETP34649.1| hypothetical protein F442_17061 [Phytophthora parasitica P10297] >gi|970654070|gb|KUF92436.1| hypothetical protein AM588_10004053 [Phytophthora nicotianae]) HSP 1 Score: 71.633 bits (174), Expect = 1.363e-10 Identity = 51/198 (25.76%), Postives = 97/198 (48.99%), Query Frame = 0
Query: 84 RWLKRQGLNGLVVYGIVSWAFLMIGGSANLIDLISGFVYGSRQGLAMAYVVKLLATICAYLAGRYLFRDLLVTYFFKEYVWLAAMVRLVEERPWQSNVLIRLAAIPAAVKSYGLGAIEDPPIPFFSCAIVIMAPLSWILTDLGAKLQDPKDIF----KAKSEGSQILEIVGITCIFLVLVCGAWFGRKYVREIKAEKE 277
+WL+ G +Y F+++ + +L++G+++G GL +A KL+ ++ +Y+ GRYL R + Y + + L L+ +R L R+A P AVK+YGL ++ +F+ A++ P S+I G +++ + A+ IL +VG L+L ++ RKYV ++ E++
Sbjct: 61 QWLQTHETLGAALYVCSFTCFVVLCFPSTAFELLAGYIFGLWLGLLLATTGKLVGSVLSYVIGRYLCRRRVHAYMAQGHPALQGFQSLLRKRQILVVFLTRVAFFPIAVKNYGLSVLDVRFPVYFAAALLTGLPFSFIWVYSGHAVENFTALLASPTAARHSTEMILLLVGAGSALLLLFVVGFYTRKYVLDLAEEEK 258
BLAST of EWM23305.1 vs. NCBI_GenBank
Match: gi|301101692|ref|XP_002899934.1| (ATP-binding Cassette (ABC) superfamily [Phytophthora infestans T30-4] >gi|262102509|gb|EEY60561.1| ATP-binding Cassette (ABC) superfamily [Phytophthora infestans T30-4]) HSP 1 Score: 70.8626 bits (172), Expect = 2.306e-10 Identity = 51/207 (24.64%), Postives = 101/207 (48.79%), Query Frame = 0
Query: 84 RWLKRQGLNGLVVYGIVSWAFLMIGGSANLIDLISGFVYGSRQGLAMAYVVKLLATICAYLAGRYLFRDLLVTYFFKEYVWLAAMVRLVEERPWQSNVLIRLAAIPAAVKSYGLGAIEDPPIPFFSCAIVIMAPLSWILTDLGAKLQDPKDIF----KAKSEGSQILEIVGITCIFLVLVCGAWFGRKYVREI-KAEKEAEMSAVQS 285
WL+ G +Y F+++ + +L++G+++G GL +A KL+ ++ +Y+ GRYL R + Y + + L L+ +R L R+A P A+K+YGL ++ +F+ A++ P S+I G +++ + ++ +L +VG L+L + RKYV ++ + EK+A+ +A +
Sbjct: 61 HWLQTHETIGAALYVCSFTCFVVLCFPSTAFELLAGYIFGLWLGLLLATTGKLVGSVLSYVIGRYLCRRRVHAYMAQGHPALQGFQSLLRKRQILVVFLTRVAFFPIAIKNYGLSVLDVRFPVYFAAALLTGLPFSFIWVYSGHAVENFTALLASPAASRHSTEMVLLLVGAGSALLLLFVVGLYTRKYVLDLAEEEKDADTTAADT 267
BLAST of EWM23305.1 vs. NCBI_GenBank
Match: gi|695412349|ref|XP_009525716.1| (hypothetical protein PHYSODRAFT_360349 [Phytophthora sojae] >gi|348676841|gb|EGZ16658.1| hypothetical protein PHYSODRAFT_360349 [Phytophthora sojae]) HSP 1 Score: 69.3218 bits (168), Expect = 9.009e-10 Identity = 54/203 (26.60%), Postives = 95/203 (46.80%), Query Frame = 0
Query: 84 RWLKRQGLNGLVVYGIVSWAFLMIGGSANLIDLISGFVYGSRQGLAMAYVVKLLATICAYLAGRYLFRDLLVTYFFKEYVWLAAMVRLVEERPWQSNVLIRLAAIPAAVKSYGLGAIEDPPIPFFSCAIVIMAPLS--WILT-----DLGAKLQDPKDIFKAKSEGSQILEIVGITCIFLVLVCGAWFGRKYVREIKAEKEAE 279
RWL+ G +Y F+++ + +L++G+++G GL +A KL+ ++ +Y GRYL R + Y + + L L+ +R L R+A P AVK+YGL ++ FF+ A++ P S W+ + + A L P ++ +L +VG L+L + RKYV + E++ E
Sbjct: 65 RWLQTHEALGAALYVGSFTGFVVLCFPSTAFELLAGYIFGFWLGLLLATAGKLVGSVLSYAIGRYLCRRRVHAYMARGHPALQGFQSLLRKRQVLVVFLTRVAFFPIAVKNYGLSVLDVQFPVFFAAALLTGLPFSVIWVYSGHAVENFTALLASPT---ASRHSTEMVLLLVGAGSALLLLAVVGIYTRKYVLGLAEEEKRE 264 The following BLAST results are available for this feature:
BLAST of EWM23305.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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