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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100057g18.3923.mrna |
| Orig protein id | gnl|cribi|Naga_100057g18.3923 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:347068..348558 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7332 ID=rna7332|Name=rna7332|organism=Nannochloropsis gaditana|type=mRNA|length=2016bp
ATGGGGCGCCAAGCCGATTTGAAGGAAATTCTAGTTCCAACTCGTATCAC
AACAGTGGCACTACAAAGCACAGCAGCCGTGGCGTCACTTGATTTAAGCC
GTGGACTTGGACCGGGCGCCACCGAAGCAGGGCCCTCCCCCCGTCTAGCC
AAGCCCCCGAAGGCTGATAGCACTAGCATCAGCAACAGTACTAGCGGCAG
CACTGGCAGCAACAGCAGCAGCGGCAAACGTTTCCAGCCTAAACAACACA
GCAATATGGCCGCAGGAGGAGCTGCCGCCCCGCCTTCAACCTCCTCTGTC
TCCGCGGCCAACGTCACGTCCTCCCTTCACGACCGAGGCATGCAGCAGCT
CATTCCAATCGTAAACAAGCTCCAAGATGTCTTCGCCGCCATCGGGAAGC
ATCCCCTGGACCTTCCCCAGATTGTGGTCATTGGGAGCCAGTCCTCGGGG
AAGAGCTCCGTCCTGGAGCATATCGTGGGTCGCGACTTCCTGCCTCGCGG
GACCGGAATTGTCACCCGTCGGCCCCTGATCCTGCAGCTCTACAACACCG
CCTTTCTACGCGGTGGGGGAGAGGACGAGGGAGGGCGGGAGGGCGGGAGG
GAGGGCATCCCGGAGGGGAAGGAGTGGGGCGAGTTCTTGCACCGGGCGGG
CGAGCGCTTCTACGATTTTATGGAGATCCGGGACGAGATCAAGAGGGAGA
CGGACCGGCTGACGGGGAAGAACAAGGGCATCAGCGCCAAGAGTATCAAC
CTGAAGGTCTACTCCCCCCACGTGCTCAACTTGACCCTGGTGGACCTGCC
CGGGATCACCAAAGTCTCCGTCGGTGACCAGCCCGCGGACATCGAGTCGC
AGATCCGCGCCATGTGCCTCGCCTACATCGGAAACCCCAACTCCATCATC
CTGGCAGTGACGGCAGCCAACACAGACATCGCCAATTCCGACTCCTTGAA
GCTGGCCCGCGAGGTGGATCCTGACGGGCTGCGGACAATCGGCGTCTTGA
CGAAGATGGACTTGATGGACCCTGGCACGGACGCGGCGGACGTGCTCTTG
AACCGCGTCATTCCTCTCCGCATCGGCTACGTGGCGGTCGTGAATCGGGG
CCAGCGGGACATCGACAGCAATCTGACAATTCGGGAGGCGCTCCGGAAGG
AGGCAGGCTTCTTCAAGGCCCACCCCGTGTACCGGTCCATGCTCAAGCAG
TGCACGACCCCGACCCTTACGCGCATGCTCAACAACATCCTTATGCACCA
CATCCGAGACTGCCTCCCCGAGATCAAGAGCCGCATCCAGGCGATGACCA
TGGACGTGGGCAGGGAACTCGAGGCGCTGGGAGAGCCCACCACGGAACTC
TCGCGCGCCACGCTAGGCGGCACCATGCTCGGGCTCTTGTCTCGCTTCGC
CTCCACCTTCCAGAGCGCCGTGGAGGGCCGCGGCAGCTTCGCCGCGGGCC
GGGAGGGCGGGGGCGTGGGGGGGGCGGAGACCCTGGAGCTATACGGGGGG
GCCAGGATCAACTACATCTTCAGCGAGATCTTCGGGAAGGCCCTCATGGG
CATCGATCCCTTCGCCACCCTGACGGACGAGGAGATTCGGACGGCCATCT
GCAACGCGAACGGGACCCGGCCCGCCCTCTTCGTGCCCGAGATCAGCTTC
GACCTGCTCGTCAAGCGGCAGATCTCCCGCCTGGAGCAGCCCGGCCTCCA
ATGCGTGGACCTGGTCTTCGATGAGCTCCTGCGCATGGCCGCGCAGTGCG
AGACGACGGAGCTGACCCGCTTCCCGGAGCTCCGAGACCGGGTGGTTGAG
GTGGTGAACCACATGCTCCGCAAGTGCGTGGGCCCCACCCAGATGATGAT
CTCGAACCTGATCAATATCGAGCTAGCCTACATTAACACCTCGCACCCTG
ACTTCATCGGGGGCTCGCGGGCTGTGGCCCAGTTGATGGAGAAGATGGCG
CAGGAGAAGGGCGGGGGCGGGCGCGAGGGGGCCGGGAGGAGAGAGGGAGT
CCCGGGCGGGGGCTGA back to topprotein sequence of rna7332 >rna7332-protein ID=rna7332-protein|Name=rna7332|organism=Nannochloropsis gaditana|type=polypeptide|length=230bp
MSAHVPHGPPRQRNTLLLQSIAVLILARTLYAFVSPTVPSRRSVESLVAH
RVVPVLLARVGGGFGFGKKKTLASEVDDLKYFEGTIYSPYPGRRPLPPFE
STPCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLA
TTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGATEEEAFIT
FRVKRHVWMSERSKFLRGEDGGWLFLDEQV back to topmRNA from alignment at CM002471.1:347068..348558+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7332 ID=rna7332|Name=rna7332|organism=Nannochloropsis gaditana|type=mRNA|length=1491bp|location=Sequence derived from alignment at CM002471.1:347068..348558+ (Nannochloropsis gaditana)
GACAAGGTTTTTTCTCCTCTGGAAAGCAGCCTGCAGCTGTCTAGGTGACC
TCCCGCCCAGTCCAGCCCAGCCTCAGGAGTTACCGAGTTGGAACTAGAAT
TTCCTTCAAATCGGCTTGGCGCCCCATTTGTCGGTCTTCAGTGAGCTAAC
TTTGTCCTCTCAATCAAACAGGTGGCTTTCGCTGTACTTATGTCCGCGCA
CGTTCCCCACGGACCCCCTCGTCAACGCAATACGCTCCTTCTGCAATCCA
TTGCAGTCCTGATACTAGCACGTACGCTATATGCCTTTGTTTCGCCCACT
GTACCATCGCGCAGATCCGTCGAGAGTCTAGTCGCACACAGAGTTGTCCC
AGTGCTCCTTGCCCGAGTGGGCGGTGGCTTTGGGTTtgggaaaaagaaaa
catTGGCATCCGAGGTGGACGACCTGAAGTACTTTGAAGGCACCATTTAT
TCCCCTTATCCTGGAcgtcgccctctccctcctttcgaaAGCACACCTTG
TGCTTGCGGCTCGGACAAATCCTACGGCCAGTGTTGCTTCCCCTTgcaca
agggagaggacagggccAGCACTCCGGAGGCACTCCTGCGCTCGCGCTAT
TCTGCCTACGTTCACGGCTTTCCCAGATATCTGCTGGCCACGACACATCC
CTCGTCCGCTCCCATGCGACCTAAGCGACTGAAGGCTTATTTGGAACTTT
TGGAGATTGCCTGCTCGGAAGAGAATTTGAAGCAACTCCAAATAGGGGTg
caggaggccggggcgacggaagaggaggctttcATAACTTTTAGGGTGAA
AAGACACGTGTGGATGAGCGAACGGAGCAAATTTTTGagaggcgaggacg
gaggctggTTATTTTTGGACGAACAAGTCTAAGCGTCAGGATGTACAGTC
ACCCAATCAAATATCTGCCGcacgccccccgcccgtggGGACTGACAATG
CTGAAGAGGCtaggaaaagcaggagaagacgaaaTTTTGAGATTTCCTGA
GATGTAAGCACACAAAAAGCAAAGTCGATCGGGCCTGTACTTGCGCCCCC
GTATCGCTTTATCAGTTCTGTGGCACCCCACCGTGTCCCACCGCGACCCC
TTTAATGCCCCCTCGCCACGTCACTCCTGAGGCAACACACCGCCCTTGCA
AGATCCACCCCAGTCCACCCCAgtccacctcctgctccactcGTCCGCCT
CACCATGAGCCTCTCACCCCCAAGACCTGTCGGCAGCCTCGGCGTGTGGC
GGCTATCCTGCCCCACCACCCTGCCCgaaccccctcctcccccctccccc
caccgccgccagAAGTCACGCCTCACGTTCTTTTCATTTGCACCCATTCC
ATTAGAAGGAGCGCCGGTCAACCgactctcctcccgcctctccccccctt
ctcctgccccgctTGGAACACagtcatcccttcctccctactaccctcct
tccctccctctctcgcccccttcattccctcctcaacctcc back to topCoding sequence (CDS) from alignment at CM002471.1:347068..348558+ >rna7332 ID=rna7332|Name=rna7332|organism=Nannochloropsis gaditana|type=CDS|length=693bp|location=Sequence derived from alignment at CM002471.1:347068..348558+ (Nannochloropsis gaditana)
ATGTCCGCGCACGTTCCCCACGGACCCCCTCGTCAACGCAATACGCTCCT
TCTGCAATCCATTGCAGTCCTGATACTAGCACGTACGCTATATGCCTTTG
TTTCGCCCACTGTACCATCGCGCAGATCCGTCGAGAGTCTAGTCGCACAC
AGAGTTGTCCCAGTGCTCCTTGCCCGAGTGGGCGGTGGCTTTGGGTTtgg
gaaaaagaaaacatTGGCATCCGAGGTGGACGACCTGAAGTACTTTGAAG
GCACCATTTATTCCCCTTATCCTGGAcgtcgccctctccctcctttcgaa
AGCACACCTTGTGCTTGCGGCTCGGACAAATCCTACGGCCAGTGTTGCTT
CCCCTTgcacaagggagaggacagggccAGCACTCCGGAGGCACTCCTGC
GCTCGCGCTATTCTGCCTACGTTCACGGCTTTCCCAGATATCTGCTGGCC
ACGACACATCCCTCGTCCGCTCCCATGCGACCTAAGCGACTGAAGGCTTA
TTTGGAACTTTTGGAGATTGCCTGCTCGGAAGAGAATTTGAAGCAACTCC
AAATAGGGGTgcaggaggccggggcgacggaagaggaggctttcATAACT
TTTAGGGTGAAAAGACACGTGTGGATGAGCGAACGGAGCAAATTTTTGag
aggcgaggacggaggctggTTATTTTTGGACGAACAAGTCTAA back to top
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