rna7329, rna7329 (mRNA) Nannochloropsis gaditana

Overview
Namerna7329
Unique Namerna7329
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2094
Alignment locationCM002471.1:341551..342410 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100057g22.3911.mrna
Orig protein idgnl|cribi|Naga_100057g22.3911
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:341551..342410 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100057g22gene7093Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7329rna7329-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23352.1cds7312Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7329 ID=rna7329|Name=rna7329|organism=Nannochloropsis gaditana|type=mRNA|length=2094bp
GCGCCCGCGACGTCCTCTCGCTTGGGTGAAACAGGGAAGAAAATCGGAAT
CACGGCTCACACGGGTAAAATTCTCACATCTTACAGTGCAGGGAACAAAG
GGACCACTGCATATTTGTGGCATAGCTCCAGGTTGAAATAGATGTGGCCA
GGACAGCAGGCACCACCACCCCCGCCTCCTCCTCCTCCTCCTCCTCCACC
TCCCCCCCTCCCTCCTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTCCCC
CTCCTCCCCCTTCGTCCTCCGCTTTCCCCCCCCCTCCTCCTCCTCCCCCT
CCTCCCCCTCCTCCGCCTCCTCCTCCCCGATCTGCGCCGCCACTGCCACC
GCCGCCGCAGCCGCCTGGAACGTCAGGTGCAAATACGTCGGCAGCACCCC
AGGACGGCTCTTCCTTCTCGTCCTTCCATTCAGACGGCAAACCGGCTTCA
GCCAACGGGAGCACCCACGCCGGCCCGACCAAACACGCTCCTGGAAAACG
ACCGCGGCCGGGCCAGCCTCCTCCTTCGCACCTGGCGGCCGCCACCACCG
CCGCCCACAAGAGTCAGGCCGGCACGCGCGGACGTGGCGGGGCCTCGGGT
GGAAGCACCAGCGCCCCTGTCCAGCTCTCTCGGTGGCGGGACGCGATTCG
CAGCGATTTCGTGGTGGACTTGAAGTTCCAGCTTCCCCTCCCGGAGGTGC
CTCTGGGGCCCCGCTTCCTGACCGTGGACAGTTTGGCGAACTTGGGGGAC
CTCGTGAGGTACCGGGAGGTGGTGCCATTGGCTAGCAGATTCAAATATCC
GTTACACTCAGACATCTCCCTGGGCGTGGAAATCGACACGATCGACCGGA
AGAAGTGGCAGGCCCCAGTCTCGAACGGGGCCTCCCTCCCTCCCTCCCTC
CACCCGGACGATGCCGCCTTCCTCGAGTGGGAGCTGTTTCAGGGGAGGCA
GAAGAGGGAGGCGGAGGACGGGGAGGGAGGGCGGGAGGGGGGGGAGGACA
CGGAGGGCGTGGCCACCGCGGCCGACGTGGCGGCTCCATGGATGCTGCGG
CCCAGGTACGAGACGGCGGTCACGTACGACAGTCAGCAAGGGAGGGAGGG
AGGGGGCGCACAGGGGAGGAAGGGGAGGGCGGAGGGGGAAGAGGGGGAAG
AAGACGGGAGGGAGGTGCTGGACGAGACGCGGCAAGAAGGATGGGAGGCA
GCCATTGCGCGGAGCTTCGAGGAGGCGCAGAGGGGGGAGGGTTTGGGGCC
ACGGGAGGCCGGGGAGCGGAAGCCTGCCTGGGTGGCGGAGTTGGTGCCGG
ACGCGGGCCAGTGGGCGAGCGAGTTGATGGTGGTGCAGTTCGGGAACGAG
GTGCGGGGGCGGGAGGAGGAAGCGGCGCAAGAAGCGCCTTTGTTCGCTGT
GGAGGGGGGAAGGGAGGGGGAGGGTTGGGGCTTGGGGAGGACGGTGAAAG
CGGGGTACTACAGGGGCCAGGGGCACGCCTCCGTGGGGGAAGCGAGGGAG
GGGGGGGGTTCATTTGCAAGCGTTTCGAGCCTGTCCGCTACTACCATCTA
GAGGTGGGGAGGGCGGATGGGAGGGGGGGGGTCGGGGGGCCCGAGGGGGC
GCAGGGGCGGGGAACGCTACCGCAGCAGCAAGTGTTGCTGCTTGTAGACC
CGGAGGCGGGGGGGGCGAGCCTGTGCCCGATCTCGGCGGTCTTGAAGGTG
AAGAAGATGGACCGGGCGGTCTCGGAAAAGCCGGCGCGGGGCGTGAGTCT
GGTGCACCGGCCCTTGAGCGAGGAGGAGGAGGAGGCGAGGAGGGGGAAGC
TCCGGAGGGTGGGGTGGGAGGGGGAGGAGGGTGCGGGCAGGGGTTAGAAG
GAGAAGAGCCTGCAGGGGCTCGGAAATGCGCGGCCAGGGGCCAGCTGAGG
GGAGGAAAGGAGAGGGAGCGAAGGTCGGGAGTTGGGACGGGGAAGGAAAG
AAAGAAGAGAGGGGCCAAGAGGCACGGAGCACGTGGTGGTGACTGGGACT
GCTTTCTTTTCCCTGCTTCGGAGAGTACGAATGGGTATTTATTCCGTTTA
TACAAATATATGAAATATATATAGCATTTCACAAGCTCCGGAGA
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protein sequence of rna7329

>rna7329-protein ID=rna7329-protein|Name=rna7329|organism=Nannochloropsis gaditana|type=polypeptide|length=221bp
MCRSGLWFIALAFLASIATSTAFLVPFPERPLPCTRCHATAISTSGQVNR
CSVLRFWTQAAVLPALVLLSPDLRSEGRALAQAASPVEEALTRVLIVRDS
TEQLEEELTSGDTYPDVKALVNSLIRNYKLKSSMESALALLPSGSTEEGR
KFAKSAYENLTIILEYFPEDVAGPTANKTLKPDQLSFTIKALQATRKELD
SLLGLFPTELRGRLAENVANT
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mRNA from alignment at CM002471.1:341551..342410+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7329 ID=rna7329|Name=rna7329|organism=Nannochloropsis gaditana|type=mRNA|length=860bp|location=Sequence derived from alignment at CM002471.1:341551..342410+ (Nannochloropsis gaditana)
CTTTATCTCTCCCCTTGCATTACAGGAAGCATTCCATGTGCCGCAGCGGT
TTGTGGTTTATTGCGCTGGCCTTTCTGGCTTCTATTGCCACGTCTACAGC
CTTCCTGGTACCTTTTCCGGAAAGACCTTTGCCATGCACACGATGCCACG
CTACTGCCATTTCAACATCGGGCCAGGTCAATCGGTGCAGTGTCTTAAGA
TTCTGGACACAAGCAGCAGTGCTTCCTGCTCTCGTGCTTTTATCTCCCGA
CCTAAGGAGTGAAGGGCGAGCCCTCGCCCAAgccgcctcccccgtcgAGG
AGGCCCTCACCCGCGTCTTGATTGTCCGAGACTCAACGGAGCAGCTGGTA
GGTAatgagaaaagaaaacacGATGAGCTCGCCAGTCAGTTAGCTAACGA
TTCTCATGTAACTCAATCATCACCATGCTTATCTCTCACCATATTCCTGA
TTTCCTCGATCGCCTCTCACGTCagttgcccttcctcttccataccATTG
CtctaggaggaggagcttaCCAGCGGAGACACTTATCCAGACGTCAAAGC
TCTGGTCAACTCCCTTATCAGGAACTACAAATTGAAAAGCAGCATGGAAA
GTGCACttgccctcctgccctctggCTCGACAGAGGAGGGTCGGAAATTC
GCCAAGTCTGCCTACGAAAATCTGACCATTATCCTCGAATACTTCCCCGA
GGACGTTGCAGGGCCCACAGCAAACAAGACACTCAAGCCCGACCAGCTGT
CTTTCACCATTAAGGCCCTGCAGGCGACGCGGAAGGAGCTAGATTCTCTG
CTTGGGTTGTTCCCGACAGAGCTCCGGGGGCGACTCGCGGAAAACGTCGC
CAACACGTGA
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Coding sequence (CDS) from alignment at CM002471.1:341551..342410+

>rna7329 ID=rna7329|Name=rna7329|organism=Nannochloropsis gaditana|type=CDS|length=1332bp|location=Sequence derived from alignment at CM002471.1:341551..342410+ (Nannochloropsis gaditana)
ATGTGCCGCAGCGGTTTGTGGTTTATTGCGCTGGCCTTTCTGGCTTCTAT
TGCCACGTCTACAGCCTTCCTGGTACCTTTTCCGGAAAGACCTTTGCCAT
GCACACGATGCCACGCTACTGCCATTTCAACATCGGGCCAGGTCAATCGG
TGCAGTGTCTTAAGATTCTGGACACAAGCAGCAGTGCTTCCTGCTCTCGT
GCTTTTATCTCCCGACCTAAGGAGTGAAGGGCGAGCCCTCGCCCAAgccg
cctcccccgtcgAGGAGGCCCTCACCCGCGTCTTGATTGTCCGAGACTCA
ACGGAGCAGCTGgaggaggagcttaCCAGCGGAGACACTTATCCAGACGT
CAAAGCTCTGGTCAACTCCCTTATCAGGAACTACAAATTGAAAAGCAGCA
TGGAAAGTGCACttgccctcctgccctctggCTCGACAGAGGAGGGTCGG
AAATTCGCCAAGTCTGCCTACGAAAATCTGACCATTATCCTCGAATACTT
CCCCGAGGACGTTGCAGGGCCCACAGCAAACAAGACACTCAAGCCCGACC
AGCTGTCTTTCACCATTAAGGCCCTGCAGGCGACGCGGAAGGAGCTAGAT
TCTCTGCTTGGGTTGTTCCCGACAGAGCTCCGGGGGCGACTCGCGGAAAA
CGTCGCCAACACGTGAATGTGCCGCAGCGGTTTGTGGTTTATTGCGCTGG
CCTTTCTGGCTTCTATTGCCACGTCTACAGCCTTCCTGGTACCTTTTCCG
GAAAGACCTTTGCCATGCACACGATGCCACGCTACTGCCATTTCAACATC
GGGCCAGGTCAATCGGTGCAGTGTCTTAAGATTCTGGACACAAGCAGCAG
TGCTTCCTGCTCTCGTGCTTTTATCTCCCGACCTAAGGAGTGAAGGGCGA
GCCCTCGCCCAAgccgcctcccccgtcgAGGAGGCCCTCACCCGCGTCTT
GATTGTCCGAGACTCAACGGAGCAGCTGgaggaggagcttaCCAGCGGAG
ACACTTATCCAGACGTCAAAGCTCTGGTCAACTCCCTTATCAGGAACTAC
AAATTGAAAAGCAGCATGGAAAGTGCACttgccctcctgccctctggCTC
GACAGAGGAGGGTCGGAAATTCGCCAAGTCTGCCTACGAAAATCTGACCA
TTATCCTCGAATACTTCCCCGAGGACGTTGCAGGGCCCACAGCAAACAAG
ACACTCAAGCCCGACCAGCTGTCTTTCACCATTAAGGCCCTGCAGGCGAC
GCGGAAGGAGCTAGATTCTCTGCTTGGGTTGTTCCCGACAGAGCTCCGGG
GGCGACTCGCGGAAAACGTCGCCAACACGTGA
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Synonyms
Publications