EWM23352.1, cds7312 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23352.1 vs. NCBI_GenBank
Match: gi|585104360|gb|EWM23352.1| (hypothetical protein Naga_100057g22 [Nannochloropsis gaditana]) HSP 1 Score: 445.662 bits (1145), Expect = 2.525e-158 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0 Query: 1 MCRSGLWFIALAFLASIATSTAFLVPFPERPLPCTRCHATAISTSGQVNRCSVLRFWTQAAVLPALVLLSPDLRSEGRALAQAASPVEEALTRVLIVRDSTEQLEEELTSGDTYPDVKALVNSLIRNYKLKSSMESALALLPSGSTEEGRKFAKSAYENLTIILEYFPEDVAGPTANKTLKPDQLSFTIKALQATRKELDSLLGLFPTELRGRLAENVANT 221 MCRSGLWFIALAFLASIATSTAFLVPFPERPLPCTRCHATAISTSGQVNRCSVLRFWTQAAVLPALVLLSPDLRSEGRALAQAASPVEEALTRVLIVRDSTEQLEEELTSGDTYPDVKALVNSLIRNYKLKSSMESALALLPSGSTEEGRKFAKSAYENLTIILEYFPEDVAGPTANKTLKPDQLSFTIKALQATRKELDSLLGLFPTELRGRLAENVANT Sbjct: 1 MCRSGLWFIALAFLASIATSTAFLVPFPERPLPCTRCHATAISTSGQVNRCSVLRFWTQAAVLPALVLLSPDLRSEGRALAQAASPVEEALTRVLIVRDSTEQLEEELTSGDTYPDVKALVNSLIRNYKLKSSMESALALLPSGSTEEGRKFAKSAYENLTIILEYFPEDVAGPTANKTLKPDQLSFTIKALQATRKELDSLLGLFPTELRGRLAENVANT 221
BLAST of EWM23352.1 vs. NCBI_GenBank
Match: gi|299472708|emb|CBN80276.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 72.4034 bits (176), Expect = 5.196e-12 Identity = 50/135 (37.04%), Postives = 69/135 (51.11%), Query Frame = 0 Query: 77 GRALAQAASPVEEALTRVLIVRDSTEQLEEELTSGDTYPDVKALVNSLIRNYKLKSSMESALALL-PSGSTEEGRKFAKSAYENLTIILEYFPEDVAGPT-ANKTLKPDQLSFTIKALQATRKELDSLLGLFPTE 209 G + +A P+ + L V VR ST+QLE+ LT+ P + LV LI+NYKL S++ + SG + A E L EYFP +V T A K L + L FT+ AL ATR +LD L P++ Sbjct: 64 GSSGGKATKPLRDCLLNVERVRISTKQLEDTLTNDGAPPGLTGLVKGLIKNYKLDESLQQGAKYIESSGDRNAAASAGREALEYLAQTAEYFPVEVDDRTGATKKLSSEALEFTVNALIATRAKLDLFLSKVPSD 198
BLAST of EWM23352.1 vs. NCBI_GenBank
Match: gi|922852784|gb|KOO21448.1| (hypothetical protein Ctob_007745 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 62.7734 bits (151), Expect = 1.403e-8 Identity = 46/146 (31.51%), Postives = 74/146 (50.68%), Query Frame = 0 Query: 70 SPDLRSEGRALAQAASPVEEALTRVLIVRDSTEQLEEELTSGDTYP-----DVKALVNSLIRNYKLKSSMESALALLPSGSTEEGRKFAKSAYENLTIILEYFPEDVAGPTANKTLKPDQLSFTIKALQATRKELDSLLGLFPTEL 210 + D+ + GR +A +E L V ++++T Q E L S Y ++K +N ++ NY L+ A A P G ++ + +A E LT ILEYFP+ + AN L +Q +F + AL++ K +DS LG P E+ Sbjct: 31 NGDIGARGRVVAFRVGDQQE-LQIVGELKEATGQ-ETRLVSTGKYKELQRLNIKRAINMMVDNYDLRDRFVRASAYAPIGQQQQALSYGNTAVEGLTQILEYFPDKL---VAN-DLTREQSTFVLAALKSVSKSIDSFLGYMPQEV 170 The following BLAST results are available for this feature:
BLAST of EWM23352.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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