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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100057g32.3906.mrna |
Orig protein id | gnl|cribi|Naga_100057g32.3906 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002471.1 | supercontig | CM002471.1:314881..317999 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7318 ID=rna7318|Name=rna7318|organism=Nannochloropsis gaditana|type=mRNA|length=1106bp AGTACACAAATAAACAGGACAGTAATGAGGAACAAGAACAGTCTATGTGC CGTTTTGAAATTTTTGGGGTTGTACTGTTCGATCTTTCTGCTCTGCCTTG TTGACGTACCCATTGGAGTTCTTGGGGATGACGTAGTGGCCAATGATATT CAAGACACGCACGAAACTGAGAAAGCTGATTTCATTATTGATTCTGGATA TGAAACGCCATTAGATAAAAAAAGCGACATGCTTAACTTGTTGAACGAAA AGAACGCTGCCCTGTCCGCGTTAGAAAGCTCCATCAACTCCCTGCAAGAT GAGCTGAAAGACAAAGTGGAGCGCTTGGCCACCGCTGAAGAGGAGATTCG CAAATTATCTGAAAAGGTGACGGAACTAAACTCAAAGGCAGAGGAAGCTT CACTGCACATTTCCCAGTTGGAGAGAGAACGGACCGAAACACGCGATGCG GCAGCGGAAATCTTGCGTCTGAAAGAGAAAGTCGATGACCTGGAAGCTAA ATTGACGGAAGCAACCAAAGAACGCGGAAATTTAGAGCAAGAAAAGGAGG CGCAAAAAGCTGCTTGGGAGGAGGAAAAGCAGAGCTTCCAGGCTCGAGTA ACCGTTCTCGAAGATGAAATGAAGGAAAATAGTTCGTCACTCAAAAATTT GGAAGCAGAATATGCACAAAATTTAATTGCGGAGAAAGAGAAAACGGATT CCATGACTTCTCAGACGGAGAAGGAGGCGGCTGAGGCGGCTAAGAGGATC CAATCTCTAGAAGCCGAGTTGATTAAGGCACACAGCGAAGCTGCGACGGC CCGCCAGAGCTTAGAGGAGCAGCTCAAGACGAAACAAAAAGAAGTGACCG ATACAAAAGCCAAGCTTCGGCGCACTGTGAAGACTAAGTACTCGTTTCGA ACCTTGTCTTCTGACTTTGTCGCGTGGTTCAACAAAAAGTGGGAGCGTTT GTAAAAAGCTGTCAAGGAAGGTCCTTACCACAGATTAAAGCGTAATTTGC AGAAAAACTGCAAAAAGATGAAAAAGGCTTTGTTTCATTCCAGGCTGTAT TCGTTGAACAGAAATTATTAGCTTCTAGCTACTACTACAAAAGATATATT GAACGA back to topprotein sequence of rna7318 >rna7318-protein ID=rna7318-protein|Name=rna7318|organism=Nannochloropsis gaditana|type=polypeptide|length=621bp MVPWRRHCELIYLTSAKRLCFFALFLLLAWPPLVHADAAAAVNHGSTSGL ENKKEAYRSDPAHLIVPTGHDTKYDKVDELTNLLQQKVAALVNAEKAITS LENQLNIASKQLETTAQSLSASDRETSRLTQEVKELTHKLDAAEASAVAA TAQATVAVDTATAAAKKETAAWIARAEKAEAGMDVAVTEATRLKAETQAL QASVAAGKGLEGQWSEEKARMEKELAIVREEKDQAVAGLERAAAEAKARV EEEKEGTEAAMGRMREEAAAAVAEEREKTAAAVSKAQEELSRALQVEREK REEAVSAAMGEATRAKTRVQALEREVADADRRIASAQEQLSGKLAQREKE TEALRAKLEEVLATKYTWRVLSGDFSAFSGRMAALTQAKARCGISWAARE GKRRGEEAGRMLQPHVEAARMALGSQCREMEKRIQPLWTAHVLPPYREHV EPRLAQAAAYLGPVWEGEVRPRLLQGWEWGKRGAGRARAWGQAQWLAVKR RAVIWVRGQDWAAGLDAERVVTSLEYVLVATLFFLLRHLLWRLVMTALGL VVGLITLPFRILFWIFFWPVLLFGGKRKAKMEVEGPQRGGAGKAGGGGGK GRGAPGGPPPTHPLAHAQHGR back to topmRNA from alignment at CM002471.1:314881..317999+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7318 ID=rna7318|Name=rna7318|organism=Nannochloropsis gaditana|type=mRNA|length=3119bp|location=Sequence derived from alignment at CM002471.1:314881..317999+ (Nannochloropsis gaditana) TTGCGATGAGTTCCCTTTCAACTTGATGACCGTGATGCTTGCACTTTCCT
GAATAACCTTTCCTGCGTCGTCTCTTACATTCGTTACCAATTTTCTCACC
GCATCACCCAGCTTGGTTTTCAAAGCAGGTGTGATATCACAGGCCTCTGT
CATGGTTCCTTGGAGAAGACATTGTGAGCTCATCTATTTGACTTCTGCCA
AACGTCTGTGCTTCTTtgcccttttcctgcttttggCCTGGCCTCCCCTC
GTTCATGCCGATGCAGCGGCTGCGGTTAACCATGGCAGCACGAGCGGGTT
GGAGAACAAAAAGGAGGCTTATCGCAGCGATCCTGCCCACCTTATTGTGC
CCACGGGCCACGACACGAAATACGACAAGGTGGACGAGCTGACGAACCTG
CTCCAGCAAAAAGTCGGTGCGTATACGATTTTTCTCCCTCACCatcgtct
cccctcccggtAGCCCCGCCCgctgccttccctccacggGATGCTTTCCT
AAATACCAGGCATGCTGTATCGATGCGGGGGCATAGAAGGTCTTGTACAG
TTGCTGTTTGATGAGATGCTGTGCATGCAGCTTCTAGCCTGAATTTCACG
CTCTTGCCCTCGACTCATCTCGCTTTTTCATTCTATCTCTCCCGAATCAC
ACGCCAGCGGCCCTCGTCAACGCGGAAAAAGCCATCACCTCCCTTGAAAA
TCAGCTCAACATCGCCTCCAAACAACTTGAAACGACAGCACAAAGCCTGT
CCGCCTCTGACAGAGAGACCTCGAGGCTCACGCAagaggtcaaggagctg
aCGCACAAGTTGGATGCAGCCGAAGCCTCCGCCGTGGCGGCGACTGCTCA
AGCCACTGTCGCTGTCGACACTGCCACTGCGGCAGCCAAGAAGGAGACTG
CGGCATGGATAGCCAGGGCggaaaaggcagaggcgggcATGGACGTGGCG
GTGACGGAGGCGACGCGGCTGAAGGCCGAGACGCAGGCCTTGCAAGCCAG
CGTGGCCGCGGgcaagggcctggaggggcagtggtctgaggagaaagcgc
ggatggagaaggagctggcGATCGTgcgggaagagaaggatcaGGCCGTG
GCGGGTTTGGAacgggcggcggccgaggcgaAAGcccgggtggaggagga
aaaggaagggaccGAAGCagcgatggggaggatgagggaagaagcCGCGG
CAGCCGTagcggaagagagggagaagacagcCGCAGCAGTCAGCAAGGCC
CAAGAGGAGCTTTCCCGGGCGTTgcaggtggaaagggagaagcgggagga
ggcggtctCGGCAGCCATGGGGGAGGCTACAAGGGCCAAGACCAGGGTGC
AGGCGCTGGAGCGAGAGGTGGCGGACGCGGATCGGCGGATAGCGAGCGCG
CAAGAACAGCTCTCAGGGAAATTGGCgcaaagggagaaggagacggaggc
gcTTCGGGCCAAGCTGGAAGAGGTGCTGGCCACCAAGTACACCTGGCGGG
TGCTGTCGGGGGATTTCTCGGCGTTCTCCGGGCGCATGGCGGCCCTTACA
CAGGCAAAGGCTCGGTGCGGGATAAGCTGGGCTGCACGAGAAGGCaagag
gcgaggagaagaggcggggcGGATGCTGCAACCGCATGTGGAGGCCGCGC
GGATGGCCCTAGGCTCTCAGTGccgggagatggagaagaggatcCAGCCC
CTGTGGACGGCCCACGTGCTACCCCCTTATCGGGAGCACGTAGAGCCCCG
ACTGGCTCAGGCGGCGGCATACCTGGGACCggtgtgggaaggagaggtcc
GGCCCCGGTTGCTGCAAGGCTGGGAgtggggaaagcggggggcggggcgc
gcGCGAGCATGGGGCCAGGCGCAGTGGTTGGCGGTGAAACGGAGGGCAGT
CATTTGGGTAAGGGGACAGGACTGGGCGGCCGGATTGGACGCGGAACGAG
TGGTCACGAGCCTTGAATACGTGCTGGtcgccaccctcttcttcctcctt
cggcacCTGCTCTGGCGCCTTGTCATGACAGCCCTAGGCCTTGTGGTGGG
GCTGATCACGCTGCCCTTCCGGATCCTCTTTTGGATTTTCTTCTGGCCGG
TCTTGCTTTTTggcgggaagagaaaggcgaaGATGGAGGTAGAAGGGCcg
cagagggggggagcggggaaggcaggagggggtggagggaaagggcgagg
ggctCCGGGCGGCCCGCCGCCGACGCACCCGTTGGCACACGCGCAGCATG
GCCGGTAAGCTTATGTAGGAGGCGgggtgagagaggagaggcggcgctga
aagggaggatgggcggGGACTGGGTGGGCGGACCGGAATTGTTGACTGCA
GGAGCGAAGGCGTGTCGCGGGTTGGGAAGGGTGaagacagaggaagacgc
gtgGGAGGACTGAAAGCacgagagcaaggagggaacggtCTCGACGAGGG
GAAATCAGTGCGGGATGGCAAGGGTCTGAGGGGCGTAAGGGAGAAATGGA
TGGGTCgggggagtgaggaagagcaCTCGTCCACTCGTCCGCGGGACGGC
GTGGTATGGAGAAGCCCTGAGTGTGTGGAAGAGGCGCCCGCGTGTGGGGA
CGGcaaaggaggatggaggacgaggaaacagTCTCGAGGAGCGGTTGGGA
CGGCacaggaggatggaggacgaggaaacagTCTCGAGGAGCGGTTGGGA
CGGCacaggaggatggaggacgaggaaacagTCTCGAGGAGCggttgggg
ggggcgaggcaaggggggcCCACAGAGTGCTGCGCGAGCGGAAGGACCAT
GTAGGAAGCACACgggtgggggatggggggagagCAATGCCccgaggagg
gtgggaggggaagggtcgcccccccggctcggagcgaggaggacgataga
ggcaggagggaggggcggcccGAGGCTCCGGGAAGGCAGGAGTCCTCAGG
GCACGGGCGGGTccaaaggggagagggcgcatTCAATCCCGCTCTGCcta
ggaaggagaggggggggccggCCTAGGGGGGGCCGCCTGGGAAAGACTGA
GAGAAAAAGACCCGTCGACTGTCTCCAGCCTAGGGGAAAGTCGACGCAAA
GAACAAAATCAGGACCTGA back to topCoding sequence (CDS) from alignment at CM002471.1:314881..317999+ >rna7318 ID=rna7318|Name=rna7318|organism=Nannochloropsis gaditana|type=CDS|length=3732bp|location=Sequence derived from alignment at CM002471.1:314881..317999+ (Nannochloropsis gaditana) ATGGTTCCTTGGAGAAGACATTGTGAGCTCATCTATTTGACTTCTGCCAA ACGTCTGTGCTTCTTtgcccttttcctgcttttggCCTGGCCTCCCCTCG TTCATGCCGATGCAGCGGCTGCGGTTAACCATGGCAGCACGAGCGGGTTG GAGAACAAAAAGGAGGCTTATCGCAGCGATCCTGCCCACCTTATTGTGCC CACGGGCCACGACACGAAATACGACAAGGTGGACGAGCTGACGAACCTGC TCCAGCAAAAAGTCGCGGCCCTCGTCAACGCGGAAAAAGCCATCACCTCC CTTGAAAATCAGCTCAACATCGCCTCCAAACAACTTGAAACGACAGCACA AAGCCTGTCCGCCTCTGACAGAGAGACCTCGAGGCTCACGCAagaggtca aggagctgaCGCACAAGTTGGATGCAGCCGAAGCCTCCGCCGTGGCGGCG ACTGCTCAAGCCACTGTCGCTGTCGACACTGCCACTGCGGCAGCCAAGAA GGAGACTGCGGCATGGATAGCCAGGGCggaaaaggcagaggcgggcATGG ACGTGGCGGTGACGGAGGCGACGCGGCTGAAGGCCGAGACGCAGGCCTTG CAAGCCAGCGTGGCCGCGGgcaagggcctggaggggcagtggtctgagga gaaagcgcggatggagaaggagctggcGATCGTgcgggaagagaaggatc aGGCCGTGGCGGGTTTGGAacgggcggcggccgaggcgaAAGcccgggtg gaggaggaaaaggaagggaccGAAGCagcgatggggaggatgagggaaga agcCGCGGCAGCCGTagcggaagagagggagaagacagcCGCAGCAGTCA GCAAGGCCCAAGAGGAGCTTTCCCGGGCGTTgcaggtggaaagggagaag cgggaggaggcggtctCGGCAGCCATGGGGGAGGCTACAAGGGCCAAGAC CAGGGTGCAGGCGCTGGAGCGAGAGGTGGCGGACGCGGATCGGCGGATAG CGAGCGCGCAAGAACAGCTCTCAGGGAAATTGGCgcaaagggagaaggag acggaggcgcTTCGGGCCAAGCTGGAAGAGGTGCTGGCCACCAAGTACAC CTGGCGGGTGCTGTCGGGGGATTTCTCGGCGTTCTCCGGGCGCATGGCGG CCCTTACACAGGCAAAGGCTCGGTGCGGGATAAGCTGGGCTGCACGAGAA GGCaagaggcgaggagaagaggcggggcGGATGCTGCAACCGCATGTGGA GGCCGCGCGGATGGCCCTAGGCTCTCAGTGccgggagatggagaagagga tcCAGCCCCTGTGGACGGCCCACGTGCTACCCCCTTATCGGGAGCACGTA GAGCCCCGACTGGCTCAGGCGGCGGCATACCTGGGACCggtgtgggaagg agaggtccGGCCCCGGTTGCTGCAAGGCTGGGAgtggggaaagcgggggg cggggcgcgcGCGAGCATGGGGCCAGGCGCAGTGGTTGGCGGTGAAACGG AGGGCAGTCATTTGGGTAAGGGGACAGGACTGGGCGGCCGGATTGGACGC GGAACGAGTGGTCACGAGCCTTGAATACGTGCTGGtcgccaccctcttct tcctccttcggcacCTGCTCTGGCGCCTTGTCATGACAGCCCTAGGCCTT GTGGTGGGGCTGATCACGCTGCCCTTCCGGATCCTCTTTTGGATTTTCTT CTGGCCGGTCTTGCTTTTTggcgggaagagaaaggcgaaGATGGAGGTAG AAGGGCcgcagagggggggagcggggaaggcaggagggggtggagggaaa gggcgaggggctCCGGGCGGCCCGCCGCCGACGCACCCGTTGGCACACGC GCAGCATGGCCGGTAAATGGTTCCTTGGAGAAGACATTGTGAGCTCATCT ATTTGACTTCTGCCAAACGTCTGTGCTTCTTtgcccttttcctgcttttg gCCTGGCCTCCCCTCGTTCATGCCGATGCAGCGGCTGCGGTTAACCATGG CAGCACGAGCGGGTTGGAGAACAAAAAGGAGGCTTATCGCAGCGATCCTG CCCACCTTATTGTGCCCACGGGCCACGACACGAAATACGACAAGGTGGAC GAGCTGACGAACCTGCTCCAGCAAAAAGTCGCGGCCCTCGTCAACGCGGA AAAAGCCATCACCTCCCTTGAAAATCAGCTCAACATCGCCTCCAAACAAC TTGAAACGACAGCACAAAGCCTGTCCGCCTCTGACAGAGAGACCTCGAGG CTCACGCAagaggtcaaggagctgaCGCACAAGTTGGATGCAGCCGAAGC CTCCGCCGTGGCGGCGACTGCTCAAGCCACTGTCGCTGTCGACACTGCCA CTGCGGCAGCCAAGAAGGAGACTGCGGCATGGATAGCCAGGGCggaaaag gcagaggcgggcATGGACGTGGCGGTGACGGAGGCGACGCGGCTGAAGGC CGAGACGCAGGCCTTGCAAGCCAGCGTGGCCGCGGgcaagggcctggagg ggcagtggtctgaggagaaagcgcggatggagaaggagctggcGATCGTg cgggaagagaaggatcaGGCCGTGGCGGGTTTGGAacgggcggcggccga ggcgaAAGcccgggtggaggaggaaaaggaagggaccGAAGCagcgatgg ggaggatgagggaagaagcCGCGGCAGCCGTagcggaagagagggagaag acagcCGCAGCAGTCAGCAAGGCCCAAGAGGAGCTTTCCCGGGCGTTgca ggtggaaagggagaagcgggaggaggcggtctCGGCAGCCATGGGGGAGG CTACAAGGGCCAAGACCAGGGTGCAGGCGCTGGAGCGAGAGGTGGCGGAC GCGGATCGGCGGATAGCGAGCGCGCAAGAACAGCTCTCAGGGAAATTGGC gcaaagggagaaggagacggaggcgcTTCGGGCCAAGCTGGAAGAGGTGC TGGCCACCAAGTACACCTGGCGGGTGCTGTCGGGGGATTTCTCGGCGTTC TCCGGGCGCATGGCGGCCCTTACACAGGCAAAGGCTCGGTGCGGGATAAG CTGGGCTGCACGAGAAGGCaagaggcgaggagaagaggcggggcGGATGC TGCAACCGCATGTGGAGGCCGCGCGGATGGCCCTAGGCTCTCAGTGccgg gagatggagaagaggatcCAGCCCCTGTGGACGGCCCACGTGCTACCCCC TTATCGGGAGCACGTAGAGCCCCGACTGGCTCAGGCGGCGGCATACCTGG GACCggtgtgggaaggagaggtccGGCCCCGGTTGCTGCAAGGCTGGGAg tggggaaagcggggggcggggcgcgcGCGAGCATGGGGCCAGGCGCAGTG GTTGGCGGTGAAACGGAGGGCAGTCATTTGGGTAAGGGGACAGGACTGGG CGGCCGGATTGGACGCGGAACGAGTGGTCACGAGCCTTGAATACGTGCTG GtcgccaccctcttcttcctccttcggcacCTGCTCTGGCGCCTTGTCAT GACAGCCCTAGGCCTTGTGGTGGGGCTGATCACGCTGCCCTTCCGGATCC TCTTTTGGATTTTCTTCTGGCCGGTCTTGCTTTTTggcgggaagagaaag gcgaaGATGGAGGTAGAAGGGCcgcagagggggggagcggggaaggcagg agggggtggagggaaagggcgaggggctCCGGGCGGCCCGCCGCCGACGC ACCCGTTGGCACACGCGCAGCATGGCCGGTAA back to top
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