rna7294, rna7294 (mRNA) Nannochloropsis gaditana

Overview
Namerna7294
Unique Namerna7294
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length603
Alignment locationCM002471.1:264337..265035 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100189g12.10206.mrna
Orig protein idgnl|cribi|Naga_100189g12.10206
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:264337..265035 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100189g12gene7059Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7294rna7294-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23385.1cds7277Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7294 ID=rna7294|Name=rna7294|organism=Nannochloropsis gaditana|type=mRNA|length=603bp
ATGGACGGCAGTGATGACACTGAAATGGTTATCCATCAAGAAGTGGCCCC
ACTGCTTCTCCCCCTAGCTTGTGAAGCTCCCCCCCTCCTGCCCCCCCCGT
CATCTCCAGCCTCAAACGGACAAGAAGCGCACCAACCAACCATTAGCGTG
ACGCAGCTCCTTTGTATGGATGGCCAACAGTCTGCGGACCGGGCCCCGAC
CTCAAATGCATCCGTACGTACGGCTCCTCCACCCCTTCCTGATCCTCGTC
TTCCTCCTCCAACCTCGGCTCAAGGAGGTTCTTGGTCACATTTTGAGTCG
GCTGGTGCCTTCCCACGCGTCGCTCACCGGCATCTTTACCTCTGGTTGGA
CCAGAAAATATCTGAGTTGCCAGAAAATGAAGCTAAGCGGGTAAAGGCGG
TGGGAAGACTGGACTCCTTCTACGAAGAGGTGAACAGGGCCAACGCCGCA
AACACGCTTTATGACGCCGCGAAGCTCAAAGAATTTGTGGCCAAGCCCTC
TCCTTACTCTCTTTTGCTCTTTCAGGAGGAAAAAAATGGGCGTCAGGGCG
CGACAGGCGGGGCAAGTGTCGCGAAGGATGCTATAGGGGACGCAATGGGA
TGA
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protein sequence of rna7294

>rna7294-protein ID=rna7294-protein|Name=rna7294|organism=Nannochloropsis gaditana|type=polypeptide|length=171bp
EGGGGGYVPVVERMEEWSMENGLWQHFACFCRERGSKMDAVVFDFKHEVV
HKARKCPRAPVARPAGRGRGSKGGGSGKGDGRGEATRQNREQDVSEEEKE
GADKNVAGRGAEAREGGSGEADGSVLGTKVVELVHGRDREEGEDQEGREQ
GENNNDEFANQASDTLIVEEI
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mRNA from alignment at CM002471.1:264337..265035+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7294 ID=rna7294|Name=rna7294|organism=Nannochloropsis gaditana|type=mRNA|length=699bp|location=Sequence derived from alignment at CM002471.1:264337..265035+ (Nannochloropsis gaditana)
gaagggggagggggggggtatgTCCCGGTCGTAGAGCGGATGGAAGAATG
GTCGATGGAGAACGGCCTTTGGCAGCATTTCGCTTGTTTTTGTCGGGAAC
GCGGTAGCAAGATGGACGCAGTTGTGTTTGATTTCAAACACGAAGTGGTG
CACAAAGCCCGAAAATGTCCGAGAGCGCCGGTGGCCCGcccggcgggaag
gggaagagggtcaaagggaggggggtctGGGAAAGGAGACGGACGAGGGG
AAGCCACTCGGCAGAACAGGGAACAGGACGTGtcagaagaagagaaggag
ggggcagacaAGAATGtggcgggcaggggggcggaagcaagggagggtgg
gagtggcGAGGCTGATGGTTCAGTACTGGGAACAAAAGTTGTAGAACTTG
TCCATGGGCGTGatagagaagaaggagaagaccaGGAAGGCAGAGAGCAG
GGAGAGAATAATAACGATGAGTTTGCTAATCAGGCCTCAGATACTTTGAT
CGTAGAGGAGATATAGCGCTGGGCAAAGAAGACGAGCCACACCAGACTCT
TGTCAGTGGTGCCATCCGATGCAAATAATTTGAAATAAAGAATTGTGCCC
TCACCAGTCGTGTTCTGATAACTGAGGCAAAGAACTGATTTTGAATTCAT
GGTAAATCTCGATGATCTAACTTTGCGCACTTTGCTGCCCAAGGTCGCA
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Coding sequence (CDS) from alignment at CM002471.1:264337..265035+

>rna7294 ID=rna7294|Name=rna7294|organism=Nannochloropsis gaditana|type=CDS|length=516bp|location=Sequence derived from alignment at CM002471.1:264337..265035+ (Nannochloropsis gaditana)
gaagggggagggggggggtatgTCCCGGTCGTAGAGCGGATGGAAGAATG
GTCGATGGAGAACGGCCTTTGGCAGCATTTCGCTTGTTTTTGTCGGGAAC
GCGGTAGCAAGATGGACGCAGTTGTGTTTGATTTCAAACACGAAGTGGTG
CACAAAGCCCGAAAATGTCCGAGAGCGCCGGTGGCCCGcccggcgggaag
gggaagagggtcaaagggaggggggtctGGGAAAGGAGACGGACGAGGGG
AAGCCACTCGGCAGAACAGGGAACAGGACGTGtcagaagaagagaaggag
ggggcagacaAGAATGtggcgggcaggggggcggaagcaagggagggtgg
gagtggcGAGGCTGATGGTTCAGTACTGGGAACAAAAGTTGTAGAACTTG
TCCATGGGCGTGatagagaagaaggagaagaccaGGAAGGCAGAGAGCAG
GGAGAGAATAATAACGATGAGTTTGCTAATCAGGCCTCAGATACTTTGAT
CGTAGAGGAGATATAG
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Synonyms
Publications