EWM23385.1, cds7277 (CDS) Nannochloropsis gaditana

Overview
NameEWM23385.1
Unique Namecds7277
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:264337..264852 +

Link to JBrowse

Properties
Property NameValue
Start range264337
Start range.
Protein idEWM23385.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100189g12.10206.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:264337..264852 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23385.1 vs. NCBI_GenBank
Match: gi|585104397|gb|EWM23385.1| (hypothetical protein Naga_100189g12, partial [Nannochloropsis gaditana])

HSP 1 Score: 338.576 bits (867), Expect = 1.752e-117
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 
Query:    1 EGGGGGYVPVVERMEEWSMENGLWQHFACFCRERGSKMDAVVFDFKHEVVHKARKCPRAPVARPAGRGRGSKGGGSGKGDGRGEATRQNREQDVSEEEKEGADKNVAGRGAEAREGGSGEADGSVLGTKVVELVHGRDREEGEDQEGREQGENNNDEFANQASDTLIVEEI 171
            EGGGGGYVPVVERMEEWSMENGLWQHFACFCRERGSKMDAVVFDFKHEVVHKARKCPRAPVARPAGRGRGSKGGGSGKGDGRGEATRQNREQDVSEEEKEGADKNVAGRGAEAREGGSGEADGSVLGTKVVELVHGRDREEGEDQEGREQGENNNDEFANQASDTLIVEEI
Sbjct:    1 EGGGGGYVPVVERMEEWSMENGLWQHFACFCRERGSKMDAVVFDFKHEVVHKARKCPRAPVARPAGRGRGSKGGGSGKGDGRGEATRQNREQDVSEEEKEGADKNVAGRGAEAREGGSGEADGSVLGTKVVELVHGRDREEGEDQEGREQGENNNDEFANQASDTLIVEEI 171
The following BLAST results are available for this feature:
BLAST of EWM23385.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104397|gb|EWM23385.1|1.752e-117100.00hypothetical protein Naga_100189g12, partial [Nann... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7294rna7294Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications