EWM23401.1, cds7272 (CDS) Nannochloropsis gaditana

Overview
NameEWM23401.1
Unique Namecds7272
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:249614..250639 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23401.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100077g19.5191.mrna
GbkeyCDS
End range.
End range250639
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:249614..250639 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23401.1 vs. NCBI_GenBank
Match: gi|585104417|gb|EWM23401.1| (hypothetical protein Naga_100077g19, partial [Nannochloropsis gaditana])

HSP 1 Score: 659.833 bits (1701), Expect = 0.000e+0
Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0 
Query:    1 MASSPPALVPEGVPLQFMDADDEADLLCGLDEDVFGAGEVGGMDQFLAQGVLTDLEMDSMWSKVVGGENLHQQALSPAQPPHAPSCSPPSLPPDPMLAISRQPSTCTSVQSSGSCSTSGGTRPRGRGRQGGGGERGRKKKGLGATGLRRGEKAVKGEDAGSIWNGVGSAGSGETKAFSVSDGSLSASLPPSVPPSVPASVPPSTALPPSLAPFVSESFFPPFASDPALWRSSSTLSETDRSSSTCTAGTEVPPWPPGGSGGASPRRKGGRKRGREGTKPAGPKGAKKASAGRGRGGKEESSRVGAGEGPEVGGQGGGEGLGHSFPLTGGAQVFSPAGEEREG 342
            MASSPPALVPEGVPLQFMDADDEADLLCGLDEDVFGAGEVGGMDQFLAQGVLTDLEMDSMWSKVVGGENLHQQALSPAQPPHAPSCSPPSLPPDPMLAISRQPSTCTSVQSSGSCSTSGGTRPRGRGRQGGGGERGRKKKGLGATGLRRGEKAVKGEDAGSIWNGVGSAGSGETKAFSVSDGSLSASLPPSVPPSVPASVPPSTALPPSLAPFVSESFFPPFASDPALWRSSSTLSETDRSSSTCTAGTEVPPWPPGGSGGASPRRKGGRKRGREGTKPAGPKGAKKASAGRGRGGKEESSRVGAGEGPEVGGQGGGEGLGHSFPLTGGAQVFSPAGEEREG
Sbjct:    1 MASSPPALVPEGVPLQFMDADDEADLLCGLDEDVFGAGEVGGMDQFLAQGVLTDLEMDSMWSKVVGGENLHQQALSPAQPPHAPSCSPPSLPPDPMLAISRQPSTCTSVQSSGSCSTSGGTRPRGRGRQGGGGERGRKKKGLGATGLRRGEKAVKGEDAGSIWNGVGSAGSGETKAFSVSDGSLSASLPPSVPPSVPASVPPSTALPPSLAPFVSESFFPPFASDPALWRSSSTLSETDRSSSTCTAGTEVPPWPPGGSGGASPRRKGGRKRGREGTKPAGPKGAKKASAGRGRGGKEESSRVGAGEGPEVGGQGGGEGLGHSFPLTGGAQVFSPAGEEREG 342
The following BLAST results are available for this feature:
BLAST of EWM23401.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104417|gb|EWM23401.1|0.000e+0100.00hypothetical protein Naga_100077g19, partial [Nann... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7289rna7289Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications