EWM23424.1, cds7250 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|585104445|gb|EWM23424.1| (Alpha-tubulin N-acetyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 607.06 bits (1564), Expect = 0.000e+0 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0 Query: 1 METTKDRGCDHVAQDGRTSYTALRFDKAALACLPPSACAAIDSLAACSARAQGLRRPISTIRSLQASDDHILYILASTASNVADTPPPSASFLSSPPFVPSPPCSQPAEAVTPSTSPPYIFILPSSASFIAFDLPHAPSSPSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSSPPCPPWCSSGGPLPFVNNHSLE 311 METTKDRGCDHVAQDGRTSYTALRFDKAALACLPPSACAAIDSLAACSARAQGLRRPISTIRSLQASDDHILYILASTASNVADTPPPSASFLSSPPFVPSPPCSQPAEAVTPSTSPPYIFILPSSASFIAFDLPHAPSSPSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSSPPCPPWCSSGGPLPFVNNHSLE Sbjct: 1 METTKDRGCDHVAQDGRTSYTALRFDKAALACLPPSACAAIDSLAACSARAQGLRRPISTIRSLQASDDHILYILASTASNVADTPPPSASFLSSPPFVPSPPCSQPAEAVTPSTSPPYIFILPSSASFIAFDLPHAPSSPSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSSPPCPPWCSSGGPLPFVNNHSLE 311
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|553190554|ref|XP_005855214.1| (hypothetical protein NGA_0112700 [Nannochloropsis gaditana CCMP526] >gi|422293848|gb|EKU21148.1| hypothetical protein NGA_0112700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 521.161 bits (1341), Expect = 0.000e+0 Identity = 280/323 (86.69%), Postives = 280/323 (86.69%), Query Frame = 0 Query: 32 CLPPSACAAIDSLAACSARAQGLRRPISTIRSLQASDDHILYILASTASNVADTPPPSASFLSSPPFVPSPPCSQPAEAVTPSTSPPYIFILPSSASFIAFDLPHAPSSPSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLALGLLKLGQKHLYLTNPQG-------------------------------------------QLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSSPPCPPWCSSGGPLPFVNNHSLE 311 CLPPSACAAIDSLAACSARAQGLRRPISTIRSLQASDDHILYILASTASNVADTPPPSASFLSSPPFVPSPPCSQPAEAVTPSTSPPYIFILPSSASFIAFDLPHAPSSPSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLALGLLKLGQKHLYLTNPQG QLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSSPPCPPWCSSGGPLPFVNNHSLE Sbjct: 16 CLPPSACAAIDSLAACSARAQGLRRPISTIRSLQASDDHILYILASTASNVADTPPPSASFLSSPPFVPSPPCSQPAEAVTPSTSPPYIFILPSSASFIAFDLPHAPSSPSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLALGLLKLGQKHLYLTNPQGQVRTCESKRTDHPAMSAPHIDMVSSADLPSPPYSLPPSLRLSLQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSSPPCPPWCSSGGPLPFVNNHSLE 338
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|301103035|ref|XP_002900604.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|313471324|sp|D0NK82.1|ATAT_PHYIT RecName: Full=Alpha-tubulin N-acetyltransferase; Short=Alpha-TAT; Short=TAT; AltName: Full=Acetyltransferase mec-17 homolog >gi|262101867|gb|EEY59919.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 107.071 bits (266), Expect = 1.716e-24 Identity = 52/154 (33.77%), Postives = 82/154 (53.25%), Query Frame = 0 Query: 122 ILPSSASFIAFDLPHAPSSPSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFS 275 + PSSA+ H ++ +LS ++ + + +T + +G LK G KHL+ NP+G+ E +P C+LDF++ WQR+G+G L + L E + P LA+DRPSP+L FL KH L ++ Q N F+V+D +F Sbjct: 31 VRPSSAT-------HRATAQTLSHEITSTDLFATSTATEQQQTLLLAINDDDGAVMGFLKTGVKHLFYLNPRGEYTEIDPICVLDFYVDEVWQRRGVGLQLFQRLLQEENTT-PAQLAYDRPSPKLFAFLKKHVGLTEYFPQPNRFVVFDAYFQ 176
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|698790414|ref|XP_009828239.1| (hypothetical protein H257_05167 [Aphanomyces astaci] >gi|574117087|gb|ETV82570.1| hypothetical protein H257_05167 [Aphanomyces astaci]) HSP 1 Score: 103.99 bits (258), Expect = 1.182e-23 Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 0 Query: 178 GLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFS 275 G+LK+G+KHL+ + P+G +E +P C+LDF++ QR GLG L L E ++ PH LA+DRPSP+L PFL KHF L + Q N F+VYD +FS Sbjct: 63 GVLKVGRKHLFYSKPRGGFIEMDPLCVLDFYVHPDRQRHGLGLHLFTSMLERESVA-PHQLAYDRPSPKLFPFLRKHFKLDSYVPQSNRFVVYDAYFS 159
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|1214705117|gb|OWZ16865.1| (Alpha-tubulin N-acetyltransferase [Phytophthora megakarya]) HSP 1 Score: 103.99 bits (258), Expect = 1.606e-23 Identity = 46/101 (45.54%), Postives = 67/101 (66.34%), Query Frame = 0 Query: 175 LALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFS 275 +A+G LK G KHL+ +P+G+ +E +P C+LDF++ WQR+G+G L + L E I+ P LA+DRPSP+L FL KH L H Q N F+V+D++F Sbjct: 62 VAMGFLKTGIKHLFYMSPKGEYIEIDPICVLDFYVDENWQRRGVGLQLFQHLLHQENIA-PAQLAYDRPSPKLFAFLKKHAGLTDHFPQPNRFVVFDEYFQ 161
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|678308628|emb|CDW90312.1| (alpha-tubulin n-acetyltransferase [Stylonychia lemnae]) HSP 1 Score: 107.457 bits (267), Expect = 7.137e-23 Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 0 Query: 178 GLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCS 284 G+LK+G+K+L++ N GQ+ E P C+LDF++ QR G+G L L E ++ P L +DRPS +LL FLAKH+ LK++ Q N+F+VY +F P S S + Sbjct: 85 GILKVGKKNLFIRNESGQMTEIKPLCVLDFYVHESMQRNGIGKQLFERMLQVEKVN-PQRLGYDRPSEKLLSFLAKHYHLKRYVPQANNFVVYSQYFDPQVSTKSST 190
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|673026784|ref|XP_008867353.1| (hypothetical protein H310_04679 [Aphanomyces invadans] >gi|574477400|gb|ETW04397.1| hypothetical protein H310_04679 [Aphanomyces invadans]) HSP 1 Score: 100.908 bits (250), Expect = 1.649e-22 Identity = 48/100 (48.00%), Postives = 65/100 (65.00%), Query Frame = 0 Query: 176 ALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFS 275 A G+LK+G+KHL+ P+G +E +P C+LDFF+ QR GLG L + L E I+ PH LA+DRPSP+L F+ KHF L Q N F++YD +FS Sbjct: 61 AWGILKVGRKHLFYLTPRGDFMELDPLCVLDFFVHPQRQRHGLGLHLFKSMLERESIA-PHQLAYDRPSPKLFSFMRKHFGLDTFVDQPNRFVIYDAYFS 159
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|1049254744|ref|XP_017566919.1| (PREDICTED: alpha-tubulin N-acetyltransferase 1 isoform X6 [Pygocentrus nattereri]) HSP 1 Score: 103.99 bits (258), Expect = 3.666e-22 Identity = 50/115 (43.48%), Postives = 67/115 (58.26%), Query Frame = 0 Query: 175 LALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSS 289 +A+G LK+G K L+L + +G VET P C+LDF++ QR G G L R L H+ + P +A+DRPSP+ L FL KHF LK Q N+F+V+D FF P VT Sbjct: 86 VAVGYLKVGYKKLFLLDQRGAHVETEPLCVLDFYVTENLQRHGYGLELFRFMLEHKKVE-PEQMAYDRPSPKFLAFLEKHFELKHSVPQVNNFVVFDGFFRNRSGTPPSPVTDQG 199
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|1049254746|ref|XP_017566920.1| (PREDICTED: alpha-tubulin N-acetyltransferase 1 isoform X7 [Pygocentrus nattereri]) HSP 1 Score: 103.99 bits (258), Expect = 3.906e-22 Identity = 50/115 (43.48%), Postives = 67/115 (58.26%), Query Frame = 0 Query: 175 LALGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSPFPSLPSCSVTSSS 289 +A+G LK+G K L+L + +G VET P C+LDF++ QR G G L R L H+ + P +A+DRPSP+ L FL KHF LK Q N+F+V+D FF P VT Sbjct: 86 VAVGYLKVGYKKLFLLDQRGAHVETEPLCVLDFYVTENLQRHGYGLELFRFMLEHKKVE-PEQMAYDRPSPKFLAFLEKHFELKHSVPQVNNFVVFDGFFRNRSGTPPSPVTDQG 199
BLAST of EWM23424.1 vs. NCBI_GenBank
Match: gi|403351420|gb|EJY75201.1| (Alpha-tubulin N-acetyltransferase (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 104.375 bits (259), Expect = 4.431e-22 Identity = 50/142 (35.21%), Postives = 79/142 (55.63%), Query Frame = 0 Query: 141 PSLSSPLSPSSSLPCTASTPSPAASFPSSPSSSFLA------LGLLKLGQKHLYLTNPQGQLVETNPFCLLDFFIASPWQRKGLGASLLRLALSHEGISGPHCLAFDRPSPRLLPFLAKHFALKKHRAQHNHFLVYDDFFSP 276 + S + + L C+ +T F S + +L LGLLK+G+++L++ N GQ+ E P C+LDF++ QR G+G L L+ E + PH +DRPS +LL FL+KH+ LKK+ Q N+F+V+ +F Sbjct: 44 DKMGSASAKAQKLGCSITTAQKF--FASDDNKLYLMVEGRQCLGLLKIGKRNLFIRNESGQMREIKPQCVLDFYVHESVQRNGIGKQLFERMLTQEKLQ-PHKFGYDRPSEKLLSFLSKHYYLKKYVPQANNFVVFSQYFDQ 182 The following BLAST results are available for this feature:
BLAST of EWM23424.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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