EWM23426.1, cds7247 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23426.1 vs. NCBI_GenBank
Match: gi|585104450|gb|EWM23426.1| (hypothetical protein Naga_102493g1 [Nannochloropsis gaditana]) HSP 1 Score: 201.06 bits (510), Expect = 2.232e-65 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 Query: 1 MQRRVVSSIPHPPISPPLPPSLPFQERNVIDCCRVEFLRPVSSTPDTPSCAFDVQSIERTWTLCAANETDLQQWLLLLASAIDMDVAVLPDDEVSFLVKPR 101 MQRRVVSSIPHPPISPPLPPSLPFQERNVIDCCRVEFLRPVSSTPDTPSCAFDVQSIERTWTLCAANETDLQQWLLLLASAIDMDVAVLPDDEVSFLVKPR Sbjct: 1 MQRRVVSSIPHPPISPPLPPSLPFQERNVIDCCRVEFLRPVSSTPDTPSCAFDVQSIERTWTLCAANETDLQQWLLLLASAIDMDVAVLPDDEVSFLVKPR 101
BLAST of EWM23426.1 vs. NCBI_GenBank
Match: gi|1200643520|gb|OUX51096.1| (hypothetical protein CBE43_04830 [bacterium TMED283]) HSP 1 Score: 85.5001 bits (210), Expect = 5.030e-18 Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 0 Query: 25 QERNVIDCCRVEFLRPVSSTPDTPSCAFDVQSIERTWTLCAANETDLQQWLLLLASAIDMDVAVLPDDEVSFLVKPR 101 +ER +ID C+V F+RPVS D P +FD+ +IER WTL A ++ +Q WL ++ AID D A++PDDE+ F VKPR Sbjct: 158 RERRIIDLCKVTFVRPVSRHDDIPPNSFDICTIEREWTLSAESKASMQLWLQIVTRAIDEDTAIVPDDELVFTVKPR 234
BLAST of EWM23426.1 vs. NCBI_GenBank
Match: gi|673041385|ref|XP_008874653.1| (hypothetical protein H310_10154 [Aphanomyces invadans] >gi|574469863|gb|ETV96876.1| hypothetical protein H310_10154 [Aphanomyces invadans]) HSP 1 Score: 59.3066 bits (142), Expect = 3.757e-8 Identity = 28/70 (40.00%), Postives = 43/70 (61.43%), Query Frame = 0 Query: 30 IDCCRVEFLRPVSSTPDTPSCAFDVQSIERTWTLCAANETDLQQWLLLLASAIDMDVAVLPDDEVSFLVK 99 ID V +RP ++ PD P +FD+ ++ RTW+ CAA+E D WL +L +D+ A++PD +S VK Sbjct: 369 IDLASVLCIRPQAALPDAPPFSFDIVTLYRTWSFCAADEADRAAWLRVLGEHVDLAAALVPDAPLSCEVK 438
BLAST of EWM23426.1 vs. NCBI_GenBank
Match: gi|698816204|ref|XP_009841131.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574103736|gb|ETV69274.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 58.9214 bits (141), Expect = 6.025e-8 Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 0 Query: 30 IDCCRVEFLRPVSSTPDTPSCAFDVQSIERTWTLCAANETDLQQWLLLLASAIDMDVAVLPDDEVSFLVK 99 ID V +RP S+ PD P AFD+ ++ RTW+ CA++E+D WL +L +D A++PD +S VK Sbjct: 402 IDLASVLCIRPQSALPDAPPFAFDIVTLYRTWSFCASDESDHATWLHILGVFVDRAAALVPDAPLSCDVK 471
BLAST of EWM23426.1 vs. NCBI_GenBank
Match: gi|698816202|ref|XP_009841130.1| (hypothetical protein H257_14906 [Aphanomyces astaci] >gi|574103735|gb|ETV69273.1| hypothetical protein H257_14906 [Aphanomyces astaci]) HSP 1 Score: 58.5362 bits (140), Expect = 6.653e-8 Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 0 Query: 30 IDCCRVEFLRPVSSTPDTPSCAFDVQSIERTWTLCAANETDLQQWLLLLASAIDMDVAVLPDDEVSFLVK 99 ID V +RP S+ PD P AFD+ ++ RTW+ CA++E+D WL +L +D A++PD +S VK Sbjct: 402 IDLASVLCIRPQSALPDAPPFAFDIVTLYRTWSFCASDESDHATWLHILGVFVDRAAALVPDAPLSCDVK 471 The following BLAST results are available for this feature:
BLAST of EWM23426.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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