rna7264, rna7264 (mRNA) Nannochloropsis gaditana

Overview
Namerna7264
Unique Namerna7264
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length375
Alignment locationCM002471.1:175018..175786 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102493g1.3512.mrna
Orig protein idgnl|cribi|Naga_102493g1.3512
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:175018..175786 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102493g1gene7029Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7264rna7264-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23426.1cds7247Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7264 ID=rna7264|Name=rna7264|organism=Nannochloropsis gaditana|type=mRNA|length=375bp
ATGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAAGGAAGGAGG
GGAGCGGGGAGCGGAGCGTGTGGGCAAGATTGCCCTTCAACTCACTGTAT
TTAAAGAGGATTACAGCGCCAAGAGTGACTACATATTCCGGACACGGAAA
GCCTCTCAAATCGCTCGCACGCTCGAGTTTCACATCGAAAAATACATGGC
ATGGGCCCACATGCGGCTTGAATTGGAAGATGGTGGGGAGGGAGAGAGAG
AGGGAGGGAGGAAGGGAGGGAGGGAGAAAGGGAGGGCGAGCGGAAGGGGG
GAGGGGCCAGCAAGGCAGAAGGGAACATTTCTCTCCATGCACCCGATGTA
CCGGCAACCCCATCATCTCCGCTGA
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protein sequence of rna7264

>rna7264-protein ID=rna7264-protein|Name=rna7264|organism=Nannochloropsis gaditana|type=polypeptide|length=101bp
MQRRVVSSIPHPPISPPLPPSLPFQERNVIDCCRVEFLRPVSSTPDTPSC
AFDVQSIERTWTLCAANETDLQQWLLLLASAIDMDVAVLPDDEVSFLVKP
R
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mRNA from alignment at CM002471.1:175018..175786-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7264 ID=rna7264|Name=rna7264|organism=Nannochloropsis gaditana|type=mRNA|length=769bp|location=Sequence derived from alignment at CM002471.1:175018..175786- (Nannochloropsis gaditana)
ATGCAACGTCGAGTTGTTTCGTCCATTCCTCACCCGCCCATCTCACCCCC
CCTCCCTCCCTCCCTCCCTTTCCAGGAACGCAACGTGATCGACTGCTGCC
GTGTCGAGTTCCTTCGGCCCGTCTCAAGTACGCCAGACACGCCGTCCTGC
GCCTTTGACGTCCAGTCCATTGAGCGGACATGGACGCTCTGCGCGGCGAA
CGAGGTCGGGAAGGAGGGAGGGCGGGAGGACGGGGGGAGGGCGGGGGAGA
GGAATGGAGGAGCAAGAGGGTAGGAGGAAAACTCAGAGGATGCCGACGTG
CCGGCCCATCTCCAGGGCCCTTTGCTTAATATTTGCTACGCCCTGTTCTC
ACACGACGCCTCCCTCCCTCCCTCCCTTCCCTCCCTCCCTCCCTCCCTTC
CTCCCTCCCTCCCTCCAGACGGACCTTCAGCAGTGGCTCCTCCTCCTTGC
CTCGGCCATCGACATGGACGTGGCCGTTCTCCCCGACGATGAAGTCTCCT
TCCTGGTCAAGCCCCGGTAGGCGTCTCCAACCGCCTTCGTCTCCCTCTCT
CCCTCCCTCCCGGCCACCCTCCCCACCTCTCTCTCGCTCTCTCTGTCTCT
GTCCTGGCAAGTGCCAGACCTTCTTCTTTGTGTATGACAGTCTCTTTTAT
TTCTCTCCTCGTACGCTGCCCTCGCTTTCTAAGCTGCCCACGCCTTTTTC
TTCAGCTTGCATTAAACTTGCATTCCCCAAATCCAATTACTGCGCTGATT
GAACGTTGATCACATGTCC
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Coding sequence (CDS) from alignment at CM002471.1:175018..175786-

>rna7264 ID=rna7264|Name=rna7264|organism=Nannochloropsis gaditana|type=CDS|length=612bp|location=Sequence derived from alignment at CM002471.1:175018..175786- (Nannochloropsis gaditana)
ACGGACCTTCAGCAGTGGCTCCTCCTCCTTGCCTCGGCCATCGACATGGA
CGTGGCCGTTCTCCCCGACGATGAAGTCTCCTTCCTGGTCAAGCCCCGGT
AGATGCAACGTCGAGTTGTTTCGTCCATTCCTCACCCGCCCATCTCACCC
CCCCTCCCTCCCTCCCTCCCTTTCCAGGAACGCAACGTGATCGACTGCTG
CCGTGTCGAGTTCCTTCGGCCCGTCTCAAGTACGCCAGACACGCCGTCCT
GCGCCTTTGACGTCCAGTCCATTGAGCGGACATGGACGCTCTGCGCGGCG
AACGAGACGGACCTTCAGCAGTGGCTCCTCCTCCTTGCCTCGGCCATCGA
CATGGACGTGGCCGTTCTCCCCGACGATGAAGTCTCCTTCCTGGTCAAGC
CCCGGTAGATGCAACGTCGAGTTGTTTCGTCCATTCCTCACCCGCCCATC
TCACCCCCCCTCCCTCCCTCCCTCCCTTTCCAGGAACGCAACGTGATCGA
CTGCTGCCGTGTCGAGTTCCTTCGGCCCGTCTCAAGTACGCCAGACACGC
CGTCCTGCGCCTTTGACGTCCAGTCCATTGAGCGGACATGGACGCTCTGC
GCGGCGAACGAG
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Synonyms
Publications