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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101245g1.3819.mrna |
| Orig protein id | gnl|cribi|Naga_101245g1.3819 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:122703..124134 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7251 ID=rna7251|Name=rna7251|organism=Nannochloropsis gaditana|type=mRNA|length=559bp
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGCCCTCCCTCCCGCC
CTCCCGCCCTCCCTCCTTGTCCTGTATCATCGCTCCAGGCTATCATCCCT
CCACATATCCGTCTCCAAAGACTCTATTTCTTCCTTTTCGGGCCTTTCCC
TCGCTGCCGTCTCTCTTCTTCCCTCATGCCCCACCTTTGTCTCCAACGTC
CTCCCCTCCTACTTTTCCTCCTTCCCCCTCCTCCCCACCCCAAAAAGAAT
TCCGTTATGAGAAGGGCAAAGATGGGAAGCTCTCTCCGACTTCCGCCTAC
CTGGCCACGGAGCAAAAGCGAGTGGAACAGAGGGAGCGGAGGTTGAGGCG
GGGCAGAGGGCCTCCAGAGGAAGGGGCCAGTAAATTTTTGTCGAGGGGAG
GGACCGGGGGAGGAAGGGAGGGAGGAGAGGAGGAGGAAGGATAGTAAATA
CGTCTGGAAAGGAAAGGGAGGGTATAGCTCAAGCGTGCAAGCAACATTGA
GATTATAATGTGAACATACAATAAAGGGAAGTTAGATATCTTCTATTTTG
ATCTTTTCT back to topprotein sequence of rna7251 >rna7251-protein ID=rna7251-protein|Name=rna7251|organism=Nannochloropsis gaditana|type=polypeptide|length=316bp
MQHHGLHLNFRGRAVHKRLYSPGTLFYSRPPSSGSGIRTISASSPLLPGQ
LLPPARAQGAFPSSPRQHASTVVGMKRQRHSPLSERCCLLLPSLWLLLII
HPPTGQGCPASILKTVDRRPLLSSRPSPSPDDKGGPSPTRSALQLVRVRH
SRFLLPPLFPPPSVFAGHLRQLWRRFTHIFHKEIEALTEADPREENILEL
IRTLPEAVSEGHHETVHSLKRGWAALQHKALEGLLVVGWGGGEEGAEGGG
EGRGLSQAVWRSRVAEVEQHATLWVTKRSREHLEQVKILREGGREGGREG
GAATWNLLVCLSLARS back to topmRNA from alignment at CM002471.1:122703..124134+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7251 ID=rna7251|Name=rna7251|organism=Nannochloropsis gaditana|type=mRNA|length=1432bp|location=Sequence derived from alignment at CM002471.1:122703..124134+ (Nannochloropsis gaditana)
GCTTGTAGTGGTCGCCGGGGATGTATTCCCTCTAGTATGGTTTTGAGCAC
GGCTCTGATCACCCTGTGGGGCACGCAAGGAGGTGCATCACGTCTACTCA
CTGGTGGCATGTCCCCGCTAACATGCAACACCATGGCCTGCATTTGAATT
TCAGAGGACGGGCCGTACATAAGAGGCTTTACTCACCCGGTACCCTTTTC
TattcacgtcctccatccaGTGGAAGCGGAATCCGTaccatctccgcctc
ctctcctctccttcccgggcagctccttcctccggctCGGGCACAAGGGg
catttccctcttccccgcgacAGCACGCCTCGACCGTCGTTGGgatgaag
aggcagagaCATTCACCTCTGTCGGAGCGGTGttgcctcctgcttccctc
tctatGGCTGCTGCTCATTATCCATCCACCAACGGGCCAGGGTTGTCCTG
CAAGCATCCTCAAGACAGTCGatcgccgccccctcctctcttcgcgtccc
tctccttcccccgacgACAAGGGAGGCCCCTCTCCGACTCGATCAGCCCT
GCAGCTGGTCCGCGTCCGGCATTCCCGattcctgcttcctcccctcttcc
cccccccttcggtCTTTGCCGGGCATCTCCGGCAATTGTGGCGGCGGTTC
ACGCACATTTTCCACAAGGAGATTGAGGCTTTGACGGAGGCTGACCCCAG
GGAAGAGAATATTCTGGAACTCATACGGACTTTGCCGGAGGCAGTCTCGG
AGGTGAGGAGGCCTGCATGGACTaaatcctctccccccctccccttctcc
ttccctccctccctccctccttgcccccctctccccgtttCCGCTGCCGA
GCTTCTCCCGTGCCAGACGTATATGTAAAACACATCATTCTCTCGATACT
GGAGCTCGACACTTCCcatctcccgcctccctcttgagCATTtcgccggc
cctccctcagggtcctcgttccttcccctccttctcttgtccaccccctc
cctccgcctcaggGCCACCATGAAACTGTGCATTCCTTGAAACGAGGCTG
GGCGGCCCTCCAGCACAAGGCGCTGGAGGGCCTGTTGGTGgttgggtggg
ggggaggggaggaaggggcggagggcgggggggagggcagggggttGTCG
CAGGCGGTGTGGCGGTCCCGAGTGGCGGAAGTGGAGCAGCACGCGACCTT
GTGGGTGACGAAAAGGAGCCGGGAACACCTGGAGCAGGTGAAGAttttga
gggagggagggagggagggagggagggaaggtggagcGGCGACGTGGAAT
TTGCTCGTttgtctctctctcgcccgcTCTTGAACCTGTATCCCTTTGTG
CTGTCCTCGACGGTGCATTTCCAGCACGAATACTCCATGTCCTTAGATat
ttgctccctcccgccctatctccctccctccc back to topCoding sequence (CDS) from alignment at CM002471.1:122703..124134+ >rna7251 ID=rna7251|Name=rna7251|organism=Nannochloropsis gaditana|type=CDS|length=1902bp|location=Sequence derived from alignment at CM002471.1:122703..124134+ (Nannochloropsis gaditana)
ATGCAACACCATGGCCTGCATTTGAATTTCAGAGGACGGGCCGTACATAA
GAGGCTTTACTCACCCGGTACCCTTTTCTattcacgtcctccatccaGTG
GAAGCGGAATCCGTaccatctccgcctcctctcctctccttcccgggcag
ctccttcctccggctCGGGCACAAGGGgcatttccctcttccccgcgacA
GCACGCCTCGACCGTCGTTGGgatgaagaggcagagaCATTCACCTCTGT
CGGAGCGGTGttgcctcctgcttccctctctatGGCTGCTGCTCATTATC
CATCCACCAACGGGCCAGGGTTGTCCTGCAAGCATCCTCAAGACAGTCGa
tcgccgccccctcctctcttcgcgtccctctccttcccccgacgACAAGG
GAGGCCCCTCTCCGACTCGATCAGCCCTGCAGCTGGTCCGCGTCCGGCAT
TCCCGattcctgcttcctcccctcttcccccccccttcggtCTTTGCCGG
GCATCTCCGGCAATTGTGGCGGCGGTTCACGCACATTTTCCACAAGGAGA
TTGAGGCTTTGACGGAGGCTGACCCCAGGGAAGAGAATATTCTGGAACTC
ATACGGACTTTGCCGGAGGCAGTCTCGGAGgGCCACCATGAAACTGTGCA
TTCCTTGAAACGAGGCTGGGCGGCCCTCCAGCACAAGGCGCTGGAGGGCC
TGTTGGTGgttgggtgggggggaggggaggaaggggcggagggcgggggg
gagggcagggggttGTCGCAGGCGGTGTGGCGGTCCCGAGTGGCGGAAGT
GGAGCAGCACGCGACCTTGTGGGTGACGAAAAGGAGCCGGGAACACCTGG
AGCAGGTGAAGAttttgagggagggagggagggagggagggagggaaggt
ggagcGGCGACGTGGAATTTGCTCGTttgtctctctctcgcccgcTCTTG
AATGCAACACCATGGCCTGCATTTGAATTTCAGAGGACGGGCCGTACATA
AGAGGCTTTACTCACCCGGTACCCTTTTCTattcacgtcctccatccaGT
GGAAGCGGAATCCGTaccatctccgcctcctctcctctccttcccgggca
gctccttcctccggctCGGGCACAAGGGgcatttccctcttccccgcgac
AGCACGCCTCGACCGTCGTTGGgatgaagaggcagagaCATTCACCTCTG
TCGGAGCGGTGttgcctcctgcttccctctctatGGCTGCTGCTCATTAT
CCATCCACCAACGGGCCAGGGTTGTCCTGCAAGCATCCTCAAGACAGTCG
atcgccgccccctcctctcttcgcgtccctctccttcccccgacgACAAG
GGAGGCCCCTCTCCGACTCGATCAGCCCTGCAGCTGGTCCGCGTCCGGCA
TTCCCGattcctgcttcctcccctcttcccccccccttcggtCTTTGCCG
GGCATCTCCGGCAATTGTGGCGGCGGTTCACGCACATTTTCCACAAGGAG
ATTGAGGCTTTGACGGAGGCTGACCCCAGGGAAGAGAATATTCTGGAACT
CATACGGACTTTGCCGGAGGCAGTCTCGGAGgGCCACCATGAAACTGTGC
ATTCCTTGAAACGAGGCTGGGCGGCCCTCCAGCACAAGGCGCTGGAGGGC
CTGTTGGTGgttgggtgggggggaggggaggaaggggcggagggcggggg
ggagggcagggggttGTCGCAGGCGGTGTGGCGGTCCCGAGTGGCGGAAG
TGGAGCAGCACGCGACCTTGTGGGTGACGAAAAGGAGCCGGGAACACCTG
GAGCAGGTGAAGAttttgagggagggagggagggagggagggagggaagg
tggagcGGCGACGTGGAATTTGCTCGTttgtctctctctcgcccgcTCTT
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