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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100594g4.9591.mrna |
Orig protein id | gnl|cribi|Naga_100594g4.9591 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002471.1 | supercontig | CM002471.1:118502..119830 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7248 ID=rna7248|Name=rna7248|organism=Nannochloropsis gaditana|type=mRNA|length=2724bp ATGAGACAGACTACCCTAACCCACAAAGCCGTGGGGGCGGGGCTTTTGGC CTTGGTCCTCCTCGCGCAAGCCAGCATGGCGTTCATTCCAGGGCGAATGG CTGTCCGCACTCTTTTCCAGCCACTGAAACAACACCAGGCTTCCCGCGTG GTGCTTTCCATGGCGGAAGCGATTGAGATCGCCATGCCTGCTCTGTCCTC GACAATGACCGAAGGGAAAATTGTGGAATGGACTGCCAAAGTAGGGGACA AGATCAAAGCCGGGCAAACCATCATGGTGGTGGAATCGGACAAGGCCGAC ATGGACGTCGAAGCATTCGAAGAAGGTTTCCTTGCCAAGATTGTTTTTGG GGACGGTGCTTCGGCCCCAGTGGGTGCCACGGTGGCATTGCTTGCCAGGT CCAAGGAAGAAATTCCAGCCGTCCAAGCCATGACCCCTGGTGCCTCCCCT GCGACGGCCCCAGCTGCTGCACCTGCTCCGGAAAGCTCCGCACCGGCAGG TGGAGGTGCGTCCTTGGGCGTACCTACCAATGAAATCGCCATGCCTGCTC TGTCCTCGACCATGACCGAAGGGAAAATTGTGGAATGGACTGTGAAAGTA GGGGACAAGATCAAAGCCGGGCAAACCATCATGGTGGTGGAATCGGACAA GGCCGACATGGACGTGGAAGCCTTCGAAAGCGGGTACGTCGCCGCGATTC TGGCCAAGGCCGGGGAGGCGACCCTGGTGGGTGCGCCTTGCGCCCTGCTC GTTGACAACGAGGCCGACGTCGAGAAGGTCAAGGCTGCCCTGGCAAGCGC CGACGTTGACTTTGCGGAGGTGGCCATGCCTGCCTTGTCCTCGACCATGA CCAGCGGGAAAATCGTGGCTTGGACGGCCAAAGTGGGCGACAGCGTGAAA GCGGGCCAGACCGTGATGGTGGTGGAGTCGGACAAGGCGGACATGGACGT GGAAGCCTTCGAAGGCGGCGTACTCGCCTCGATATTGACGGGCGAAGGAG ATTCGGCGAAGGTGGGGGACCCCGTCGCCCTCTTGGCAGCCAAAAAGGAG GACGTGCCCGCCCTCCAAGCCTACGGCCAGGCGCTCAAAGCCTCATTATC CGGTGCTCCTGCCCCTGCGCCCGCCGTTTCGGCGGCGGCCGCCACGGCGC CAGCGGCATCCACGCCTGTCGCAGCCACCGCGGTGAGTCCCCCGGGGGAG CGTGTGGTCGCCTCCGGGTATGCGAAGAAGCTGGCTTCAGAGGCGGGAGT GGACCTGCGGTCCGTCCCAGGGACGGGGCTGGGAGGACGCGTGGTGGGAG CCAACGTGATTGCGGCGGCAGCGGGAAAACCCATGGCGAAGCCCTTGGGG TACCGCTCTCCTCCTGGCTCGGCCACGCCTTTGGCCAAGCGGCTGGCGGC GGAAGCCGGGCTGGATTTGAAAAGTTTGAAAGGTACGGGGGAGTTTGGGC GGGTGACGGCGGACGACGTGTTGATTGCCACGGGGAAGAAGAGCCCGGTC AAGAAGCAGGCAGCGGGCGGGAAGGCCGGGCCGGTCAAAGCGCCCAAACC TGCTCCCGGTCCCATGCCCACGGGGACCAAATCCATGGACGGGATGATGA AAGCCGTGGCGAAGAACATGGAGAAGACCTTGGACGTACCCATTTTCCGG GTCTCGCGCCTGATCACCACGGACAAATTCGACAAGATGTATGCCGAGGT CAAGGGCCAGGGGGTGTCGGTCTCGGCCCTCCTCGCCAAGGCAGTCGCCA AGACCTTGGAGCGCCACCCGATCTTAAACGCGGCCTACGACCCCGCGGGC GCCATCAAGTACAACCCGGATATCAACATTGCCATGGCAGTGGCCTTGGA CGGCGGTCTGATCACGCCCACCCTCCGGAACGCCAACGCCATGGACCTGG TCTCCCTGGGGGGGAAATGGCGGGAATTGGTCAAGAAAGCGCAGGAGAAA CGCTTGGCCCCTGACGAATACACGACGGGTACTTTTACCATCAGCAACCT GGGCATGTACGGGGTCTCGGCTTTCGACGCCATCCTGCCCCCTGGACAAG GCTCGATTTTGGCGATCGGCGGTTCGATTCCCACCGTGGTTGTGCGCAAG GACGGCAGCTTTGCCGTCCAGAAACAGATGACCGTGACCATCACGTGCGA CCATCGGCACATTTATGGAGCGGACGCGGCAGAGTTTTTGCGGGATCTGG CCGAGCTGATGGAGGAGGACGCGGGAGGGACGGACATAACAGTAGCGCGT TTGGAGGGAGGAGCAACGATCGATTATAGATATTGGACGGTAAAAGGTGG AACAGATTTAAGCCGGAGGAGTCTGTCGGCGGGTCCCTCTCTATGTGTCA TATCTGTGCTGGAATGTGCGCGTGTGCGTGTGTGGGGTGTGTGGTGGTGG GGCTTAGGTGCGTCAGACGGCGTCAGACCTGGAAGGTGGAAGAGAATGGA GTCCTTTTGCATGTTTTTCTCCGTGTCATTTTGTATCTCCGTCATGCTAT CTTTGGCGTACCGTCATGAATGTGTGCCATCACGAGACAAAGGTGGCTCT GCGCGAACACAGCGACGGGTAAGAGAAGAAAAGAAAGACTTGGAGCAGAG AAGGCCTCCTGTGTCGCATAACGTCGCGTATCGTACGAGCCTCGTATATC GTGCTATTGCTTCGTTCTGGTTTACAGCCTTAGACCCCGATGCTCCAAGC AGTCCCAGATTATTGCAGGCATGA back to topprotein sequence of rna7248 >rna7248-protein ID=rna7248-protein|Name=rna7248|organism=Nannochloropsis gaditana|type=polypeptide|length=170bp MHKGRLIAWPVPAMMVGTTKKTSASRACPSTLTPAFSRYAALRFLARRTG TGIVFFTVEDRAYAAFEPQSENILCREKAAPLWEDPQLMTAEALNEIFAP DEKENIMLLRSMWTASCIFRLDGIFVDSLDLQARVWEQVAEGISGTPPSL PPSFPPSLLPGPHLARASAR back to topmRNA from alignment at CM002471.1:118502..119830+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7248 ID=rna7248|Name=rna7248|organism=Nannochloropsis gaditana|type=mRNA|length=1329bp|location=Sequence derived from alignment at CM002471.1:118502..119830+ (Nannochloropsis gaditana) AATGTCAGAACCTAAGCGTATATGCGGGCCAAATGCCTGattttttttgt
ttcctATCGCCCTCGGGTTGTATTTTTGTGCAGGAAAAAGCGGGGCATAC
TGCACACAAGCAGAACAATTTTCCTTCGTCCTGAGGTGCCCAATTACCAT
CATTGCGGCCTTCGTGGAAGTCAAGCTGCACATGGCAATGTCCTTTTGTG
CATCTACCCGCCCGACCACGACGTTGGTACTACTTGTCCTCTTGAAAGTG
GCCACGACCTTCGCTTtcatccccccttctctACCATTTTCGCTGCCCTC
TAACACTCCAACCCTTTTTCACGCACGGCGCGAGCCCTTTGAAGCTTGTG
GTATCCATGCACAAAGGCCGCTTAATCGCTTGGCCGGTGCCGGCAATGAT
GGTTGGaacgacgaagaagacgtCCGCTTCTCGGGCTTGTCCAAGCACAT
TGACACCGGCTTTCTCAAGGTACGCGGCTCTTCGTTTCCTCGCCCGTCGG
ACTGGCACAGGCATTGTCTTTTTCACCGTTGAAGATCGAGCTTATGCCGC
CTTTGAACCCCAGTCTGAAAACATTCTCTGTGTACGTCGTCAAAGGTCCC
CTAAAAACGGTCCCCGAAGTCATAGGACGTTGAAGGACGACCGCGGCTAC
CGCTTGTATCCTGCTTTTCGTCGGTGCGGGACAGAAAGTATGTGCCCCCC
GCGCTCCCTTCTcatgctccctctctccctccctccctccctccctccct
ccctactccctccctcagcgtGAGAAAGCCGCCCCTCTCTGGGAGGACCC
ACAACTTATGACCGCCGAAGCCTTGAACGAGATATTCGCGCCCGATGAGA
AGGAAAATATCATGCTCCTACGCTCCATGTGGACCGCGTCCTGCATTTTC
CGCcttggtggggagggagggagggaagcagggaggcagggaggcaggga
gggaggagctgacGGGTGTGTGTGCGGGGTTGAAAAGAGGCGGCAAGAAC
TTCACGGGAGGatacttttttttctcttcgtCCCTGGGACctttcgtctt
cttctttgtctttccctgtcctccttcgctcGCATGCATGTATACATACA
TTCTATCTATACATACATTATCTATTCACATCGTAAATCCGTCGTTTTCT
TGCCTGCGGTGTAAACACAGATGGCATTTTCGTCGACTCGCTCGACCTCC
AGGCCAGGGTCTGGGAGCAGGTGGCCGAGGGCATATCcggtactcctcct
tccctccctccctccttccctccctccctccttcccggacCTCATCTTGC
CCGTGCATCCGCCCGCtagccccctttcc back to topCoding sequence (CDS) from alignment at CM002471.1:118502..119830+ >rna7248 ID=rna7248|Name=rna7248|organism=Nannochloropsis gaditana|type=CDS|length=1539bp|location=Sequence derived from alignment at CM002471.1:118502..119830+ (Nannochloropsis gaditana) ATGCACAAAGGCCGCTTAATCGCTTGGCCGGTGCCGGCAATGATGGTTGG aacgacgaagaagacgtCCGCTTCTCGGGCTTGTCCAAGCACATTGACAC CGGCTTTCTCAAGGTACGCGGCTCTTCGTTTCCTCGCCCGTCGGACTGGC ACAGGCATTGTCTTTTTCACCGTTGAAGATCGAGCTTATGCCGCCTTTGA ACCCCAGTCTGAAAACATTCTCTGTcgtGAGAAAGCCGCCCCTCTCTGGG AGGACCCACAACTTATGACCGCCGAAGCCTTGAACGAGATATTCGCGCCC GATGAGAAGGAAAATATCATGCTCCTACGCTCCATGTGGACCGCGTCCTG CATTTTCCGCcttgATGGCATTTTCGTCGACTCGCTCGACCTCCAGGCCA GGGTCTGGGAGCAGGTGGCCGAGGGCATATCcggtactcctccttccctc cctccctccttccctccctccctccttcccggacCTCATCTTGCCCGTGC ATCCGCCCGCtagATGCACAAAGGCCGCTTAATCGCTTGGCCGGTGCCGG CAATGATGGTTGGaacgacgaagaagacgtCCGCTTCTCGGGCTTGTCCA AGCACATTGACACCGGCTTTCTCAAGGTACGCGGCTCTTCGTTTCCTCGC CCGTCGGACTGGCACAGGCATTGTCTTTTTCACCGTTGAAGATCGAGCTT ATGCCGCCTTTGAACCCCAGTCTGAAAACATTCTCTGTcgtGAGAAAGCC GCCCCTCTCTGGGAGGACCCACAACTTATGACCGCCGAAGCCTTGAACGA GATATTCGCGCCCGATGAGAAGGAAAATATCATGCTCCTACGCTCCATGT GGACCGCGTCCTGCATTTTCCGCcttgATGGCATTTTCGTCGACTCGCTC GACCTCCAGGCCAGGGTCTGGGAGCAGGTGGCCGAGGGCATATCcggtac tcctccttccctccctccctccttccctccctccctccttcccggacCTC ATCTTGCCCGTGCATCCGCCCGCtagATGCACAAAGGCCGCTTAATCGCT TGGCCGGTGCCGGCAATGATGGTTGGaacgacgaagaagacgtCCGCTTC TCGGGCTTGTCCAAGCACATTGACACCGGCTTTCTCAAGGTACGCGGCTC TTCGTTTCCTCGCCCGTCGGACTGGCACAGGCATTGTCTTTTTCACCGTT GAAGATCGAGCTTATGCCGCCTTTGAACCCCAGTCTGAAAACATTCTCTG TcgtGAGAAAGCCGCCCCTCTCTGGGAGGACCCACAACTTATGACCGCCG AAGCCTTGAACGAGATATTCGCGCCCGATGAGAAGGAAAATATCATGCTC CTACGCTCCATGTGGACCGCGTCCTGCATTTTCCGCcttgATGGCATTTT CGTCGACTCGCTCGACCTCCAGGCCAGGGTCTGGGAGCAGGTGGCCGAGG GCATATCcggtactcctccttccctccctccctccttccctccctccctc cttcccggacCTCATCTTGCCCGTGCATCCGCCCGCtag back to top
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