EWM23443.1, cds7231 (CDS) Nannochloropsis gaditana

Overview
NameEWM23443.1
Unique Namecds7231
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:118858..119082 +
Alignment locationCM002471.1:119270..119408 +
Alignment locationCM002471.1:119672..119820 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23443.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100594g4.9591.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:118858..119082 +
CM002471.1supercontigCM002471.1:119270..119408 +
CM002471.1supercontigCM002471.1:119672..119820 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23443.1 vs. NCBI_GenBank
Match: gi|585104475|gb|EWM23443.1| (hypothetical protein Naga_100594g4 [Nannochloropsis gaditana])

HSP 1 Score: 347.821 bits (891), Expect = 3.145e-121
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 
Query:    1 MHKGRLIAWPVPAMMVGTTKKTSASRACPSTLTPAFSRYAALRFLARRTGTGIVFFTVEDRAYAAFEPQSENILCREKAAPLWEDPQLMTAEALNEIFAPDEKENIMLLRSMWTASCIFRLDGIFVDSLDLQARVWEQVAEGISGTPPSLPPSFPPSLLPGPHLARASAR 170
            MHKGRLIAWPVPAMMVGTTKKTSASRACPSTLTPAFSRYAALRFLARRTGTGIVFFTVEDRAYAAFEPQSENILCREKAAPLWEDPQLMTAEALNEIFAPDEKENIMLLRSMWTASCIFRLDGIFVDSLDLQARVWEQVAEGISGTPPSLPPSFPPSLLPGPHLARASAR
Sbjct:    1 MHKGRLIAWPVPAMMVGTTKKTSASRACPSTLTPAFSRYAALRFLARRTGTGIVFFTVEDRAYAAFEPQSENILCREKAAPLWEDPQLMTAEALNEIFAPDEKENIMLLRSMWTASCIFRLDGIFVDSLDLQARVWEQVAEGISGTPPSLPPSFPPSLLPGPHLARASAR 170
The following BLAST results are available for this feature:
BLAST of EWM23443.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104475|gb|EWM23443.1|3.145e-121100.00hypothetical protein Naga_100594g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7248rna7248Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications