EWM23449.1, cds7224 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23449.1 vs. NCBI_GenBank
Match: gi|585104486|gb|EWM23449.1| (dihydroxy-acid dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 436.802 bits (1122), Expect = 6.585e-155 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0 Query: 1 MAIASPSLETPSPRTCTLRSLSLRLPTAPPDRHISILTGSLAPDSAVLKLSGKEVPYFQGPAICYNSEQAAFEGIMTGQVHAGHVLIIRYEGPKGSPGMPEQLSPGAALVGAGLGKDVALVTDGRFSGASHGIMVGHVAPEAAEGGPLALVEDGDTVVIDIQRRKLNLKLSSSVLAARHAKWCLPPTVAASFDCRRGALQKYTRLVQSAHVGAVTH 216 MAIASPSLETPSPRTCTLRSLSLRLPTAPPDRHISILTGSLAPDSAVLKLSGKEVPYFQGPAICYNSEQAAFEGIMTGQVHAGHVLIIRYEGPKGSPGMPEQLSPGAALVGAGLGKDVALVTDGRFSGASHGIMVGHVAPEAAEGGPLALVEDGDTVVIDIQRRKLNLKLSSSVLAARHAKWCLPPTVAASFDCRRGALQKYTRLVQSAHVGAVTH Sbjct: 1 MAIASPSLETPSPRTCTLRSLSLRLPTAPPDRHISILTGSLAPDSAVLKLSGKEVPYFQGPAICYNSEQAAFEGIMTGQVHAGHVLIIRYEGPKGSPGMPEQLSPGAALVGAGLGKDVALVTDGRFSGASHGIMVGHVAPEAAEGGPLALVEDGDTVVIDIQRRKLNLKLSSSVLAARHAKWCLPPTVAASFDCRRGALQKYTRLVQSAHVGAVTH 216
BLAST of EWM23449.1 vs. NCBI_GenBank
Match: gi|1005495303|ref|XP_015750264.1| (PREDICTED: dihydroxy-acid dehydratase 2-like isoform X2 [Acropora digitifera]) HSP 1 Score: 229.95 bits (585), Expect = 7.866e-70 Identity = 118/193 (61.14%), Postives = 144/193 (74.61%), Query Frame = 0 Query: 26 PTAPPDRHISILTGSLAPDSAVLKLSGKEVPYFQGPAICYNSEQAAFEGIMTGQVHAGHVLIIRYEGPKGSPGMPEQLSPGAALVGAGLGKDVALVTDGRFSGASHGIMVGHVAPEAAEGGPLALVEDGDTVVIDIQRRKLNLKLSSSVLAARHAKWCLPPTVAASFDCRR--GALQKYTRLVQSAHVGAVTH 216 P AP RHI IL G+LAP+SAVLKLSGK++ F+GPA+ ++ E+ AF+ I++G++ AG L+IRYEGP+GSPGMPE LSP ALVGAGLGK VALVTDGRFSGASHGIM+GHV+PEA GGP+ L+ DGD VVID + L+++LS L R KW PP RR G LQKYT+LV SAH GAVT+ Sbjct: 298 PLAPAGRHIVILKGNLAPESAVLKLSGKDIGPFRGPAVVFDGEEQAFQAIVSGKIKAGDALVIRYEGPRGSPGMPEMLSPSGALVGAGLGKSVALVTDGRFSGASHGIMIGHVSPEAQVGGPIGLLIDGDIVVIDTENGTLSVELSDEELRTRKTKWQ-PP-------LRRLTGLLQKYTKLVSSAHEGAVTY 482
BLAST of EWM23449.1 vs. NCBI_GenBank
Match: gi|922855909|gb|KOO24317.1| (dihydroxy-acid dehydratase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 230.72 bits (587), Expect = 2.019e-69 Identity = 116/193 (60.10%), Postives = 142/193 (73.58%), Query Frame = 0 Query: 21 LSLRLPTAPPDRHISILTGSLAPDSAVLKLSGKEVPYFQGPAICYNSEQAAFEGIMTGQVHAGHVLIIRYEGPKGSPGMPEQLSPGAALVGAGLGKDVALVTDGRFSGASHGIMVGHVAPEAAEGGPLALVEDGDTVVIDIQRRKLNLKLSSSVLAARHAKWCLPPTVAASFDCRRGALQKYTRLVQSAHVGA 213 + L P + +HI +L GSLAP SAV+KLSGK + F+GPA+C++SE AF IM G++ GH L+IRYEGPKG+PGMPE LSPGAALVG GLG VALVTDGRFSGASHGIM+GHV PEA +GGPLA+V DGD V ID + + L+L +S+ +AAR W PP A +G L KYT+LVQSAH+GA Sbjct: 367 MPLSAPLSAAGKHIIVLKGSLAPPSAVMKLSGKSLATFEGPAVCFDSEMDAFTAIMAGKIVKGHCLVIRYEGPKGAPGMPEMLSPGAALVGQGLGPHVALVTDGRFSGASHGIMIGHVTPEARDGGPLAVVRDGDIVRIDTKAQTLDLAISTEEIAARLKAWSPPPEKAT-----KGTLAKYTKLVQSAHLGA 554
BLAST of EWM23449.1 vs. NCBI_GenBank
Match: gi|156401717|ref|XP_001639437.1| (predicted protein [Nematostella vectensis] >gi|156226565|gb|EDO47374.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 230.335 bits (586), Expect = 2.870e-69 Identity = 118/192 (61.46%), Postives = 145/192 (75.52%), Query Frame = 0 Query: 26 PTAPPDRHISILTGSLAPDSAVLKLSGKEVPY-FQGPAICYNSEQAAFEGIMTGQVHAGHVLIIRYEGPKGSPGMPEQLSPGAALVGAGLGKDVALVTDGRFSGASHGIMVGHVAPEAAEGGPLALVEDGDTVVIDIQRRKLNLKLSSSVLAARHAKWCLPPTVAASFDCRRGALQKYTRLVQSAHVGAVTH 216 P +P RHI IL GSLAP+SAVLKLSGK++ F+GPA+ ++ E++A+ +M +V AG VL+IRYEGP GSPGMPE LSPGA LVGAGLG VALVTDGRFSGASHGIM+GHV+PEA GP+ALVE+GDTVVID L+L+++ VLAAR A+W +PP G L+KY++ V SAH GAVTH Sbjct: 372 PFSPAGRHILILKGSLAPESAVLKLSGKDITKAFRGPAVVFDGEESAYRAVMNNEVKAGDVLVIRYEGPSGSPGMPEMLSPGAVLVGAGLGTKVALVTDGRFSGASHGIMIGHVSPEAQRAGPIALVENGDTVVIDPTTCALDLEVNEDVLAARRARW-VPPVKKLP-----GLLKKYSKFVSSAHQGAVTH 557
BLAST of EWM23449.1 vs. NCBI_GenBank
Match: gi|1176093756|ref|XP_020617402.1| (uncharacterized protein LOC110055358 isoform X3 [Orbicella faveolata] >gi|1176093758|ref|XP_020617403.1| uncharacterized protein LOC110055358 isoform X3 [Orbicella faveolata]) HSP 1 Score: 228.794 bits (582), Expect = 3.312e-69 Identity = 115/192 (59.90%), Postives = 147/192 (76.56%), Query Frame = 0 Query: 28 APPDRHISILTGSLAPDSAVLKLSGKEVP-YFQGPAICYNSEQAAFEGIMTGQVHAGHVLIIRYEGPKGSPGMPEQLSPGAALVGAGLGKDVALVTDGRFSGASHGIMVGHVAPEAAEGGPLALVEDGDTVVIDIQRRKLNLKLSSSVLAARHAKWCLPPTVAASFDCRR--GALQKYTRLVQSAHVGAVTH 216 AP RHI IL G+LAP SAVLKLSGK++ F+GPA+ ++ E+ AF+ +M G++ AG VL+IRYEGP+GSPGMPE L P ALVGAGLGK+VALVTDGRFSGASHGIM+GHV+PEA GGP+ L+EDGD +VID + L+++L+ VL+ R +KW PP RR G L+KY+++V SAHVGAVT+ Sbjct: 310 APAGRHILILKGNLAPASAVLKLSGKDISGAFRGPAVIFDGEERAFQSVMNGKIKAGDVLVIRYEGPRGSPGMPEMLVPSGALVGAGLGKEVALVTDGRFSGASHGIMIGHVSPEAQVGGPIGLIEDGDIIVIDPKTATLHVELTDEVLSERKSKWQPPP--------RRLTGLLKKYSKVVSSAHVGAVTY 493
BLAST of EWM23449.1 vs. NCBI_GenBank
Match: gi|1005495301|ref|XP_015750263.1| (PREDICTED: dihydroxy-acid dehydratase 2-like isoform X1 [Acropora digitifera]) HSP 1 Score: 229.95 bits (585), Expect = 6.485e-69 Identity = 118/193 (61.14%), Postives = 144/193 (74.61%), Query Frame = 0 Query: 26 PTAPPDRHISILTGSLAPDSAVLKLSGKEVPYFQGPAICYNSEQAAFEGIMTGQVHAGHVLIIRYEGPKGSPGMPEQLSPGAALVGAGLGKDVALVTDGRFSGASHGIMVGHVAPEAAEGGPLALVEDGDTVVIDIQRRKLNLKLSSSVLAARHAKWCLPPTVAASFDCRR--GALQKYTRLVQSAHVGAVTH 216 P AP RHI IL G+LAP+SAVLKLSGK++ F+GPA+ ++ E+ AF+ I++G++ AG L+IRYEGP+GSPGMPE LSP ALVGAGLGK VALVTDGRFSGASHGIM+GHV+PEA GGP+ L+ DGD VVID + L+++LS L R KW PP RR G LQKYT+LV SAH GAVT+ Sbjct: 391 PLAPAGRHIVILKGNLAPESAVLKLSGKDIGPFRGPAVVFDGEEQAFQAIVSGKIKAGDALVIRYEGPRGSPGMPEMLSPSGALVGAGLGKSVALVTDGRFSGASHGIMIGHVSPEAQVGGPIGLLIDGDIVVIDTENGTLSVELSDEELRTRKTKW-QPP-------LRRLTGLLQKYTKLVSSAHEGAVTY 575
BLAST of EWM23449.1 vs. NCBI_GenBank
Match: gi|999982938|gb|KXJ22084.1| (Dihydroxy-acid dehydratase [Exaiptasia pallida]) HSP 1 Score: 227.639 bits (579), Expect = 6.870e-69 Identity = 118/188 (62.77%), Postives = 141/188 (75.00%), Query Frame = 0 Query: 32 RHISILTGSLAPDSAVLKLSGKE-VPYFQGPAICYNSEQAAFEGIMTGQVHAGHVLIIRYEGPKGSPGMPEQLSPGAALVGAGLGKDVALVTDGRFSGASHGIMVGHVAPEAAEGGPLALVEDGDTVVIDIQRRKLNLKLSSSVLAARHAKWCLPPTVAASFDCRR--GALQKYTRLVQSAHVGAVTH 216 RHI IL GSLA DSAVLKLSGK+ F GPA+ ++ EQ A++ +M G++ AG VL+IRYEGP GSPGMPE LSPGA LVGAGLG VALVTDGRFSGASHGIM+GHV+PEA +GGP+ALVEDGD + ID + LNL++SS VL AR A+W P R+ G LQKY+ +V SAH GAVT+ Sbjct: 310 RHILILKGSLATDSAVLKLSGKDATKSFCGPAMVFDGEQEAYKAVMNGKLKAGDVLVIRYEGPSGSPGMPEMLSPGAVLVGAGLGTSVALVTDGRFSGASHGIMIGHVSPEAQKGGPIALVEDGDMITIDPAKGALNLEVSSEVLEARKARWTAPD--------RKLPGLLQKYSNIVSSAHXGAVTY 489
BLAST of EWM23449.1 vs. NCBI_GenBank
Match: gi|1176093754|ref|XP_020617401.1| (uncharacterized protein LOC110055358 isoform X2 [Orbicella faveolata]) HSP 1 Score: 228.794 bits (582), Expect = 1.654e-68 Identity = 115/192 (59.90%), Postives = 147/192 (76.56%), Query Frame = 0 Query: 28 APPDRHISILTGSLAPDSAVLKLSGKEVP-YFQGPAICYNSEQAAFEGIMTGQVHAGHVLIIRYEGPKGSPGMPEQLSPGAALVGAGLGKDVALVTDGRFSGASHGIMVGHVAPEAAEGGPLALVEDGDTVVIDIQRRKLNLKLSSSVLAARHAKWCLPPTVAASFDCRR--GALQKYTRLVQSAHVGAVTH 216 AP RHI IL G+LAP SAVLKLSGK++ F+GPA+ ++ E+ AF+ +M G++ AG VL+IRYEGP+GSPGMPE L P ALVGAGLGK+VALVTDGRFSGASHGIM+GHV+PEA GGP+ L+EDGD +VID + L+++L+ VL+ R +KW PP RR G L+KY+++V SAHVGAVT+ Sbjct: 393 APAGRHILILKGNLAPASAVLKLSGKDISGAFRGPAVIFDGEERAFQSVMNGKIKAGDVLVIRYEGPRGSPGMPEMLVPSGALVGAGLGKEVALVTDGRFSGASHGIMIGHVSPEAQVGGPIGLIEDGDIIVIDPKTATLHVELTDEVLSERKSKWQPPP--------RRLTGLLKKYSKVVSSAHVGAVTY 576
BLAST of EWM23449.1 vs. NCBI_GenBank
Match: gi|1176093752|ref|XP_020617400.1| (uncharacterized protein LOC110055358 isoform X1 [Orbicella faveolata]) HSP 1 Score: 228.794 bits (582), Expect = 2.040e-68 Identity = 115/192 (59.90%), Postives = 147/192 (76.56%), Query Frame = 0 Query: 28 APPDRHISILTGSLAPDSAVLKLSGKEVP-YFQGPAICYNSEQAAFEGIMTGQVHAGHVLIIRYEGPKGSPGMPEQLSPGAALVGAGLGKDVALVTDGRFSGASHGIMVGHVAPEAAEGGPLALVEDGDTVVIDIQRRKLNLKLSSSVLAARHAKWCLPPTVAASFDCRR--GALQKYTRLVQSAHVGAVTH 216 AP RHI IL G+LAP SAVLKLSGK++ F+GPA+ ++ E+ AF+ +M G++ AG VL+IRYEGP+GSPGMPE L P ALVGAGLGK+VALVTDGRFSGASHGIM+GHV+PEA GGP+ L+EDGD +VID + L+++L+ VL+ R +KW PP RR G L+KY+++V SAHVGAVT+ Sbjct: 403 APAGRHILILKGNLAPASAVLKLSGKDISGAFRGPAVIFDGEERAFQSVMNGKIKAGDVLVIRYEGPRGSPGMPEMLVPSGALVGAGLGKEVALVTDGRFSGASHGIMIGHVSPEAQVGGPIGLIEDGDIIVIDPKTATLHVELTDEVLSERKSKWQPPP--------RRLTGLLKKYSKVVSSAHVGAVTY 586
BLAST of EWM23449.1 vs. NCBI_GenBank
Match: gi|1005466972|ref|XP_015770443.1| (PREDICTED: dihydroxy-acid dehydratase 2-like [Acropora digitifera]) HSP 1 Score: 228.409 bits (581), Expect = 2.877e-68 Identity = 118/193 (61.14%), Postives = 144/193 (74.61%), Query Frame = 0 Query: 26 PTAPPDRHISILTGSLAPDSAVLKLSGKEVPYFQGPAICYNSEQAAFEGIMTGQVHAGHVLIIRYEGPKGSPGMPEQLSPGAALVGAGLGKDVALVTDGRFSGASHGIMVGHVAPEAAEGGPLALVEDGDTVVIDIQRRKLNLKLSSSVLAARHAKWCLPPTVAASFDCRR--GALQKYTRLVQSAHVGAVTH 216 P AP RHI IL G+LAP+SAVLKLSGK++ F+GPA+ ++ E+ AF+ I++G++ G L+IRYEGP+GSPGMPE LSP ALVGAGLGK VALVTDGRFSGASHGIM+GHV+PEA GGP+ L+ DGD VVID + L+++LS L AR KW PP RR G LQKYT+LV SAH GAVT+ Sbjct: 391 PLAPAGRHIVILQGNLAPESAVLKLSGKDIGPFRGPAVVFDGEEQAFQAIVSGKIKPGDALVIRYEGPRGSPGMPEMLSPSGALVGAGLGKSVALVTDGRFSGASHGIMIGHVSPEAQVGGPIGLLIDGDIVVIDTENGTLSVELSDEELRARKTKW-QPP-------LRRLTGLLQKYTKLVSSAHEGAVTY 575 The following BLAST results are available for this feature:
BLAST of EWM23449.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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