EWM23451.1, cds7221 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23451.1 vs. NCBI_GenBank
Match: gi|585104493|gb|EWM23451.1| (methylmalonate-semialdehyde dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 263.462 bits (672), Expect = 2.974e-89 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 Query: 1 MAARNVAYREEIFAPVLNVVCVDSLEEAIQFVNASPYGNGTAIFTSSGAAARKYQKEIDVGQVGINVPIPVPLPFFSFTGSRGSLRGDLHFYGKQGVAFYTQTKTITSNWQFHAASAQAASSMPTLK 127 MAARNVAYREEIFAPVLNVVCVDSLEEAIQFVNASPYGNGTAIFTSSGAAARKYQKEIDVGQVGINVPIPVPLPFFSFTGSRGSLRGDLHFYGKQGVAFYTQTKTITSNWQFHAASAQAASSMPTLK Sbjct: 1 MAARNVAYREEIFAPVLNVVCVDSLEEAIQFVNASPYGNGTAIFTSSGAAARKYQKEIDVGQVGINVPIPVPLPFFSFTGSRGSLRGDLHFYGKQGVAFYTQTKTITSNWQFHAASAQAASSMPTLK 127
BLAST of EWM23451.1 vs. NCBI_GenBank
Match: gi|813198224|ref|XP_012208695.1| (hypothetical protein SPRG_21223 [Saprolegnia parasitica CBS 223.65] >gi|641526241|gb|KDO20623.1| hypothetical protein SPRG_21223 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 182.185 bits (461), Expect = 1.750e-55 Identity = 85/122 (69.67%), Postives = 100/122 (81.97%), Query Frame = 0 Query: 5 NVAYREEIFAPVLNVVCVDSLEEAIQFVNASPYGNGTAIFTSSGAAARKYQKEIDVGQVGINVPIPVPLPFFSFTGSRGSLRGDLHFYGKQGVAFYTQTKTITSNWQFHAASAQAASSMPTL 126 N +Y EE+F PVL V++L++AI+ +NA+PYGNGT+IFT SG AARK+Q EIDVGQVGINVPIPVPLPFFSFTGSR S+RGDLHFYGKQGV FYTQTKTIT+ W+F Q + MPTL Sbjct: 119 NPSYVEELFGPVLVCNSVETLDDAIELINANPYGNGTSIFTQSGPAARKFQHEIDVGQVGINVPIPVPLPFFSFTGSRSSIRGDLHFYGKQGVMFYTQTKTITAQWEF-GKKTQYGTVMPTL 239
BLAST of EWM23451.1 vs. NCBI_GenBank
Match: gi|1173947897|gb|OQR96067.1| (methylmalonate-semialdehyde dehydrogenase, mitochondrial precursor [Thraustotheca clavata]) HSP 1 Score: 188.348 bits (477), Expect = 5.558e-55 Identity = 87/123 (70.73%), Postives = 102/123 (82.93%), Query Frame = 0 Query: 4 RNVAYREEIFAPVLNVVCVDSLEEAIQFVNASPYGNGTAIFTSSGAAARKYQKEIDVGQVGINVPIPVPLPFFSFTGSRGSLRGDLHFYGKQGVAFYTQTKTITSNWQFHAASAQAASSMPTL 126 +N +Y EE+F PVL VD+L+EAI+ +NA+PYGNGT+IFT SG AARK+Q EIDVGQVGINVPIPVPLPFFSFTGSR S+RGDLHFYGKQGV FYTQTKTIT+ W+F Q ++MPTL Sbjct: 397 KNPSYTEELFGPVLVCNSVDTLDEAIELINANPYGNGTSIFTQSGPAARKFQHEIDVGQVGINVPIPVPLPFFSFTGSRSSIRGDLHFYGKQGVMFYTQTKTITAQWEF-GKKTQYGTAMPTL 518
BLAST of EWM23451.1 vs. NCBI_GenBank
Match: gi|1000196697|gb|KXJ71091.1| (hypothetical protein RP20_CCG021540 [Aedes albopictus]) HSP 1 Score: 176.407 bits (446), Expect = 6.563e-54 Identity = 81/122 (66.39%), Postives = 98/122 (80.33%), Query Frame = 0 Query: 7 AYREEIFAPVLNVVCVDSLEEAIQFVNASPYGNGTAIFTSSGAAARKYQKEIDVGQVGINVPIPVPLPFFSFTGSRGSLRGDLHFYGKQGVAFYTQTKTITSNW-QFHAASAQAASSMPTLK 127 Y EEIF PVL + VD+L+EA++ VN++PYGNGTAIFT++GA ARK+ EIDVGQVG+NVPIPVPLP FSFTGSRGS GD HFYGKQGV FYTQTKT+T W + + +AA +MPT+K Sbjct: 67 CYTEEIFGPVLVCLTVDTLDEAVEMVNSNPYGNGTAIFTTNGATARKFVNEIDVGQVGVNVPIPVPLPMFSFTGSRGSFMGDCHFYGKQGVKFYTQTKTVTQLWREGDVSHTKAAVAMPTMK 188
BLAST of EWM23451.1 vs. NCBI_GenBank
Match: gi|1173937047|gb|OQR87910.1| (methylmalonate-semialdehyde dehydrogenase, mitochondrial precursor [Achlya hypogyna]) HSP 1 Score: 185.267 bits (469), Expect = 9.331e-54 Identity = 85/123 (69.11%), Postives = 101/123 (82.11%), Query Frame = 0 Query: 4 RNVAYREEIFAPVLNVVCVDSLEEAIQFVNASPYGNGTAIFTSSGAAARKYQKEIDVGQVGINVPIPVPLPFFSFTGSRGSLRGDLHFYGKQGVAFYTQTKTITSNWQFHAASAQAASSMPTL 126 +N +Y EE+F PVL VD+L++AI+ +NA+PYGNGT+IFT SG AARK+Q EIDVGQVGINVPIPVPLPFFSFTGSR S+RGDLHFYGKQGV FYTQTKT+T+ W+F Q + MPTL Sbjct: 397 KNPSYVEELFGPVLVCSSVDTLDDAIELINANPYGNGTSIFTQSGPAARKFQHEIDVGQVGINVPIPVPLPFFSFTGSRASIRGDLHFYGKQGVQFYTQTKTVTAQWEF-GKKTQYGTVMPTL 518
BLAST of EWM23451.1 vs. NCBI_GenBank
Match: gi|669149806|ref|XP_008610465.1| (methylmalonate-semialdehyde dehydrogenase (acylating) [Saprolegnia diclina VS20] >gi|530738117|gb|EQC36359.1| methylmalonate-semialdehyde dehydrogenase (acylating) [Saprolegnia diclina VS20]) HSP 1 Score: 183.726 bits (465), Expect = 3.211e-53 Identity = 86/122 (70.49%), Postives = 100/122 (81.97%), Query Frame = 0 Query: 5 NVAYREEIFAPVLNVVCVDSLEEAIQFVNASPYGNGTAIFTSSGAAARKYQKEIDVGQVGINVPIPVPLPFFSFTGSRGSLRGDLHFYGKQGVAFYTQTKTITSNWQFHAASAQAASSMPTL 126 N +Y EE+F PVL V++L+EAI+ +NA+PYGNGT+IFT SG AARK+Q EIDVGQVGINVPIPVPLPFFSFTGSR S+RGDLHFYGKQGV FYTQTKTIT+ W+F Q + MPTL Sbjct: 399 NPSYVEELFGPVLVCNSVETLDEAIELINANPYGNGTSIFTQSGPAARKFQHEIDVGQVGINVPIPVPLPFFSFTGSRSSIRGDLHFYGKQGVMFYTQTKTITAQWEF-GKKTQYGTVMPTL 519
BLAST of EWM23451.1 vs. NCBI_GenBank
Match: gi|673031048|ref|XP_008869485.1| (methylmalonate-semialdehyde dehydrogenase (acylating) [Aphanomyces invadans] >gi|574474636|gb|ETW01637.1| methylmalonate-semialdehyde dehydrogenase (acylating) [Aphanomyces invadans]) HSP 1 Score: 183.726 bits (465), Expect = 3.752e-53 Identity = 85/124 (68.55%), Postives = 101/124 (81.45%), Query Frame = 0 Query: 3 ARNVAYREEIFAPVLNVVCVDSLEEAIQFVNASPYGNGTAIFTSSGAAARKYQKEIDVGQVGINVPIPVPLPFFSFTGSRGSLRGDLHFYGKQGVAFYTQTKTITSNWQFHAASAQAASSMPTL 126 A N AY EE+F PVL VDSL+EA++ +N +PYGNGT+IFT SGAAARK+Q E+D GQVGINVPIPVPLPFFSFTGSR S+RGD+HFYGKQGV F+TQTKTIT+ W+F + Q + MPTL Sbjct: 396 ATNPAYTEELFGPVLVCTSVDSLDEALKVINTNPYGNGTSIFTQSGAAARKFQHEVDAGQVGINVPIPVPLPFFSFTGSRHSIRGDIHFYGKQGVNFFTQTKTITAQWEF-GSKTQYGTVMPTL 518
BLAST of EWM23451.1 vs. NCBI_GenBank
Match: gi|698820511|ref|XP_009843284.1| (methylmalonate-semialdehyde dehydrogenase (acylating) [Aphanomyces astaci] >gi|574101735|gb|ETV67296.1| methylmalonate-semialdehyde dehydrogenase (acylating) [Aphanomyces astaci]) HSP 1 Score: 183.341 bits (464), Expect = 4.836e-53 Identity = 84/122 (68.85%), Postives = 101/122 (82.79%), Query Frame = 0 Query: 5 NVAYREEIFAPVLNVVCVDSLEEAIQFVNASPYGNGTAIFTSSGAAARKYQKEIDVGQVGINVPIPVPLPFFSFTGSRGSLRGDLHFYGKQGVAFYTQTKTITSNWQFHAASAQAASSMPTL 126 N AY+EE+F PVL VD+L+EA+ VN++PYGNGT+IFT SGAAARK+Q E+D GQVGINVPIPVPLPFFSFTGSR S+RGD+HFYGKQGV F+TQTKTIT+ W+F + Q + MPTL Sbjct: 398 NPAYKEELFGPVLVCTSVDTLDEALNVVNSNPYGNGTSIFTQSGAAARKFQHEVDAGQVGINVPIPVPLPFFSFTGSRHSIRGDIHFYGKQGVNFFTQTKTITAQWEF-GSKTQYGTVMPTL 518
BLAST of EWM23451.1 vs. NCBI_GenBank
Match: gi|617464785|ref|XP_007573288.1| (PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like [Poecilia formosa]) HSP 1 Score: 171.785 bits (434), Expect = 6.272e-53 Identity = 78/121 (64.46%), Postives = 97/121 (80.17%), Query Frame = 0 Query: 7 AYREEIFAPVLNVVCVDSLEEAIQFVNASPYGNGTAIFTSSGAAARKYQKEIDVGQVGINVPIPVPLPFFSFTGSRGSLRGDLHFYGKQGVAFYTQTKTITSNWQFHAASAQA-ASSMPTL 126 Y+EEIF PVL ++ DSL+EAI +N +PYGNGTAIFT++GA ARKY E+DVGQVG+NVPIPVPLP FSFTGSRGS RGD +FYGKQG+ F+TQ KT+TS W+ A+ + A +MPT+ Sbjct: 3 CYKEEIFGPVLIILEADSLDEAISLINRNPYGNGTAIFTTNGATARKYTHEVDVGQVGVNVPIPVPLPMFSFTGSRGSFRGDTNFYGKQGIQFFTQIKTVTSQWKAEDATVTSPAVTMPTM 123
BLAST of EWM23451.1 vs. NCBI_GenBank
Match: gi|40215933|gb|AAL39429.2| (GM14134p, partial [Drosophila melanogaster]) HSP 1 Score: 173.711 bits (439), Expect = 6.577e-53 Identity = 80/122 (65.57%), Postives = 97/122 (79.51%), Query Frame = 0 Query: 7 AYREEIFAPVLNVVCVDSLEEAIQFVNASPYGNGTAIFTSSGAAARKYQKEIDVGQVGINVPIPVPLPFFSFTGSRGSLRGDLHFYGKQGVAFYTQTKTITSNW-QFHAASAQAASSMPTLK 127 Y EEIF PVL ++ D+L++AI VNA+PYGNGTA+FT++GAAARK+ EID GQVG+NVPIPVPLP FSFTG+RGS RGD HFYGKQG+ FYTQTKT+T W + QAA +MPT+K Sbjct: 68 CYTEEIFGPVLVILKADTLDDAIGIVNANPYGNGTAVFTTNGAAARKFVNEIDAGQVGVNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGIKFYTQTKTVTQLWRKTDVTHTQAAVAMPTMK 189 The following BLAST results are available for this feature:
BLAST of EWM23451.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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