EWM23494.1, cds7187 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23494.1 vs. NCBI_GenBank
Match: gi|585104564|gb|EWM23494.1| (hypothetical protein Naga_100198g11 [Nannochloropsis gaditana]) HSP 1 Score: 635.18 bits (1637), Expect = 0.000e+0 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
Query: 1 MSSFRVRLKRLLLKNSTYFSHAILRATKLDPFIVLIPCFIVEVISNVSLWFFRSMATLRFLALLFSCFYFCVRCQGQRFSDLKNMAANQKGGIVTVGNEFKDQAGEKFKERTEEVKSSLQGLFDPVGSPGKSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHALNPTLMNERIAELSKSDDPEIQDLFKGASENDEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQDPYISRVFRMNQ 311
MSSFRVRLKRLLLKNSTYFSHAILRATKLDPFIVLIPCFIVEVISNVSLWFFRSMATLRFLALLFSCFYFCVRCQGQRFSDLKNMAANQKGGIVTVGNEFKDQAGEKFKERTEEVKSSLQGLFDPVGSPGKSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHALNPTLMNERIAELSKSDDPEIQDLFKGASENDEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQDPYISRVFRMNQ
Sbjct: 1 MSSFRVRLKRLLLKNSTYFSHAILRATKLDPFIVLIPCFIVEVISNVSLWFFRSMATLRFLALLFSCFYFCVRCQGQRFSDLKNMAANQKGGIVTVGNEFKDQAGEKFKERTEEVKSSLQGLFDPVGSPGKSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHALNPTLMNERIAELSKSDDPEIQDLFKGASENDEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQDPYISRVFRMNQ 311
BLAST of EWM23494.1 vs. NCBI_GenBank
Match: gi|553185360|ref|XP_005854240.1| (hypothetical protein NGA_0024302 [Nannochloropsis gaditana CCMP526] >gi|422294820|gb|EKU22120.1| hypothetical protein NGA_0024302 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 339.732 bits (870), Expect = 1.149e-115 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query: 55 MATLRFLALLFSCFYFCVRCQGQRFSDLKNMAANQKGGIVTVGNEFKDQAGEKFKERTEEVKSSLQGLFDPVGSPGKSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHAL 220
MATLRFLALLFSCFYFCVRCQGQRFSDLKNMAANQKGGIVTVGNEFKDQAGEKFKERTEEVKSSLQGLFDPVGSPGKSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHAL
Sbjct: 1 MATLRFLALLFSCFYFCVRCQGQRFSDLKNMAANQKGGIVTVGNEFKDQAGEKFKERTEEVKSSLQGLFDPVGSPGKSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHAL 166
BLAST of EWM23494.1 vs. NCBI_GenBank
Match: gi|585107197|gb|EWM25436.1| (hypothetical protein Naga_100005g87 [Nannochloropsis gaditana]) HSP 1 Score: 157.918 bits (398), Expect = 4.552e-42 Identity = 80/199 (40.20%), Postives = 127/199 (63.82%), Query Frame = 0
Query: 110 ERTEEVKSSLQGLFDPVGSPGKSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHALNPTLMNERIAELSKSDDPEIQDLFKGASENDEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQDPYISRVFR 308
+R ++ + G P+ K AF QK+ K +D +ELF KSKAF+++L+NVEIQHRI++ +P+L A GFR+ GRRL+ +ET GF+ GV+N+++ K + +P IA+++ +P IQ LF+ A E D A+V EL+++ +PGVD+ +L++V + TF+KLL +PE+ RFID++ + S FR
Sbjct: 101 KRKRRLQQAASGFDQPLRPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQITGRRLSARETMEGFAIGVQNVIDFAKVAFIKVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQDVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFIDRNEFASNFFR 299
BLAST of EWM23494.1 vs. NCBI_GenBank
Match: gi|553183764|ref|XP_005853961.1| (hypothetical protein NGA_0461700 [Nannochloropsis gaditana CCMP526] >gi|422295096|gb|EKU22395.1| hypothetical protein NGA_0461700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 107.457 bits (267), Expect = 1.053e-23 Identity = 63/181 (34.81%), Postives = 101/181 (55.80%), Query Frame = 0
Query: 125 PVGSP-GKSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHALNPTLMNERIAELSKSDDPEIQDLFKGASENDEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQDPYIS 304
P P G+ Q K+G+D ++LFET F S ++IL++VE QH+I+E +P+L A GF+E GRRL D TTAGF+ G+ ++L+ K +P++ ++EL D I + F AS D ++ + + LYPGV+ ++L+ V S K+ E+ R I+ DP ++
Sbjct: 49 PAYKPDGELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVT 229
BLAST of EWM23494.1 vs. NCBI_GenBank
Match: gi|585102650|gb|EWM22205.1| (hypothetical protein Naga_100291g6 [Nannochloropsis gaditana]) HSP 1 Score: 104.375 bits (259), Expect = 1.296e-22 Identity = 55/179 (30.73%), Postives = 105/179 (58.66%), Query Frame = 0
Query: 131 KSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREAR-GRRLTDQETTAGFSKGVRNLLEMFKTSAKHALN-PTLMNERIAELSKSDDPEIQDLFKGASENDEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQDPYISRVF 307
++ + + K+ + V++F+ +K F++IL+N +IQHR+++ P+LGA++GF + RRL+ +ET FS G+ LL + + + +N P ++ +A+++ S DP IQ+LFK A ++ +V EL++ Y G+D + +++ DK +PEM FI +D +++ F
Sbjct: 74 RAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEETKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREISKQHNGDKFKQMPEMMHFIQKDASLAKAF 252
BLAST of EWM23494.1 vs. NCBI_GenBank
Match: gi|585105441|gb|EWM24107.1| (hypothetical protein Naga_100286g4 [Nannochloropsis gaditana]) HSP 1 Score: 106.301 bits (264), Expect = 2.018e-22 Identity = 60/171 (35.09%), Postives = 97/171 (56.73%), Query Frame = 0
Query: 134 FFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAGFSKGVRNLLEMFKTSAKHALNPTLMNERIAELSKSDDPEIQDLFKGASENDEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQDPYIS 304
Q K+G+D ++LFET F S ++IL++VE QH+I+E +P+L A GF+E GRRL D TTAGF+ G+ ++L+ K +P++ ++EL D I + F AS D ++ + + LYPGV+ ++L+ V S K+ E+ R I+ DP ++
Sbjct: 59 MMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEITGRRLDDAGTTAGFTAGLNSILKTLPDMLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVT 229
BLAST of EWM23494.1 vs. NCBI_GenBank
Match: gi|553185077|ref|XP_005854196.1| (hypothetical protein NGA_0186800 [Nannochloropsis gaditana CCMP526] >gi|422294860|gb|EKU22160.1| hypothetical protein NGA_0186800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 89.3521 bits (220), Expect = 7.244e-17 Identity = 55/209 (26.32%), Postives = 105/209 (50.24%), Query Frame = 0
Query: 131 KSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREAR-GRRLTDQE------------------------------TTAGFSKGVRNLLEMFKTSAKHALN-PTLMNERIAELSKSDDPEIQDLFKGASENDEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQDPYISRVF 307
++ + + K+ + V++F+ +K F++IL+N +IQHR+++ P+LGA++GF + RRL+ +E T FS G+ LL + + + +N P ++ +A+++ S DP IQ+LFK A ++ +V EL++ Y G+D + +++ DK +PEM FI +D +++ F
Sbjct: 74 RAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEEVRWQIRGKRRRKREGNLIYGRGNDETLNAQTKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREITKQHNGDKFKQMPEMMHFIQKDASLAKAF 282 The following BLAST results are available for this feature:
BLAST of EWM23494.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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