|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100198g11.5736.mrna |
| Orig protein id | gnl|cribi|Naga_100198g11.5736 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:701893..703719 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7204 ID=rna7204|Name=rna7204|organism=Nannochloropsis gaditana|type=mRNA|length=1425bp
ATCTCAAAAGATGTCCAGGTTCCCTGCGCGTGCTTCTCAGATTGATATCA
TGGAAGAATTCTTGGCTAGTTCTGGACTTGTGATTTGTTTCGTGGGAAGA
CATAGATTCAAGTTGGGCCCATATTTGAAGTAGTGTGGGTGGTATGTTGT
ACACTCTGGTCTTGCTTGTAAATGTTTTGGAGCTTATATTTACTGCCAGA
GCCTCGAGACACATTAAGATCATTTCCACTACTAGTTACAGAGACCAAAT
AATAGCAGGGACAGCAACTGAAGAAATTCTACACCATGCTCAAATTAATT
GTAAAGAGCGCGTTCCTCTTTGCCGTGCTGTGTTCGGTATGTATTTTTGG
AGTACGCCATGTCTTTTCCTGGAAAATAAGTTTTACCTTAAATATTTTTC
TCATGCATATAATTTCACCCACAGGTCGAGGGGAGGCGCGGACGGCGCGG
ACGGCGCGGACCGCGAAAGTGGATGGAGGAGCCCAACAATCAAACAGTTC
CTACGGACCCACCTTTCCCCGCGGGTGTGAATGTGAATGATATAGTGTAC
CGCAATTTCGTGACGAAACCTAAAGTTCACCGAGCGGGTCGAACTATTGT
TATGAGGACTAAGTTTTCTTTTAATAGCTGGCCAGAAGGGGCAACATCCA
TGTATTGCGCGGTGCGTACAATGTAAATTAAAGCATCACTGTAGGGATTT
CTAATTGCTAGGAGCTCAAGCAATTTCATCATCATGCATACACTTGATCT
GTCTATACAGATGCGCAATTACAATACAACCTCTGATTTAACCACGTTTG
CGGTGATCAATCAAGATCTTTCCTATGAAACCTCCGGGCCACTGTGGCGG
CCTTCAAGCTTTGGGATTTCGATGGCCGTCCAACCTGATCGAGTGGAGTG
GTCATTTGACCAAAGTGGAAAAGATCTCGTTGTTGGGAAGACATTTAATC
TTCTCGGAAGGTTGAGGCTGAACCGTCATGCCACTGCGAAACAGTATGTC
TGGCGATCTTACTGTGAGACAAAGCAGCCTCCAGGGAGAAAAAGTTGGTA
TTATTTCAAAAGCTGGATGGAGGTGAGCATGAGACCGGCGAGGCGAAAGT
AGGATATGGCATTTATTTGTGCTCGGCACTATTCTTCTGCTCGACCTTTA
TCTTCTGATGAGTCTGTCGGACGGAATACATTAATTAATTTATGCTACAA
GGAGTTTCCACTCATACGATGGTTTGAAAAGAGGATAACGGATTAGCACA
AGAACAAGGAAATAAGACTGCCTGGTGAAAAACGCAAAAAGCGAGTTACA
AAGAAAGAAAAAAACCTAGAAACTTTCCTATCCAAGGAATTGCTCATTAT
ATTCTTTCACTACTGGGCACGTCACAAATCATTGACCAATGGTCGTTATT
TCGGTGGAGTGCTTCAATGGGGAGA back to topprotein sequence of rna7204 >rna7204-protein ID=rna7204-protein|Name=rna7204|organism=Nannochloropsis gaditana|type=polypeptide|length=311bp
MSSFRVRLKRLLLKNSTYFSHAILRATKLDPFIVLIPCFIVEVISNVSLW
FFRSMATLRFLALLFSCFYFCVRCQGQRFSDLKNMAANQKGGIVTVGNEF
KDQAGEKFKERTEEVKSSLQGLFDPVGSPGKSAFFQKVKKDGIDSVELFE
TLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREARGRRLTDQETTAG
FSKGVRNLLEMFKTSAKHALNPTLMNERIAELSKSDDPEIQDLFKGASEN
DEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQD
PYISRVFRMNQ back to topmRNA from alignment at CM002470.1:701893..703719- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7204 ID=rna7204|Name=rna7204|organism=Nannochloropsis gaditana|type=mRNA|length=1827bp|location=Sequence derived from alignment at CM002470.1:701893..703719- (Nannochloropsis gaditana)
GCGTGGCGCGTGCCGGCATCCGGTTACCTGAGACCACTTCTGCCCACACT
CTCGAGCACGCGTTCGAACCACTTGCATGAGAACCTCGCTGTGAGGTGTG
CTTACATGCGAAACAATCTCGTGACTTTCTGATTTTCAAGTGTATAACGA
GATATTACGACGGCACGCGCGCGACTTCAAAAATGTCGTCATTTCGTGTT
CGCCTTAAACGCTTGCTTTTGAAAAACTCGACATACTTTTCCCATGCCAT
TCTACGCGCGACAAAGCTGGACCCCTTTATCGTTCTCATCCCATGTTTCA
TAGTTGAAGTCATTTCAAACGTTTCGCTTTGGTTTTTCAGGTCGATGGCG
ACGCTTCGATTTCTTGCTCTCCTCTTTTCCTGCTTCTACTTCTGCGTACG
ATGCCAGGGGCAGAGGTTTTCTGATCTCAAGAATATGGCAGCTAATCAGA
AGGGCGGCATTGTCACTGTAGGAAACGAATTCAAGGACCAAGCCGGCGAG
AAGTTCAAGGAAAGGACGGAAGAAGTAAAGTCTTCCCTGCAGGGCTGTGA
GTACGGATTGATCGTTGGTTCGGCAGTTCAATGAAACCTGTGTACGATAA
GGCTCCTCGGAATTTGAAACCTTTCTCCTAATACCCATATCATCTCCATT
TCCCAAATTGCTAAGTATTCGATCCTGTTGGTTCTCCGGGTAAGTCCGCT
TTCTTTCAGAAAGTCAAGAAAGATGGCATTGATTCTGTCGAGCTTTTCGA
AACTTTGTTCAAGAGCAAAGCGTTTGAGGTAAGTCAAGATCCTCGTACTG
CAAGCTATTGCTATTTTTAGAACTCAATTGCATCCCGTCATCTCAGAGCA
TTTTGGAAAATGTCGAGATTCAGCACCGAATTATCGAGGGAGTCCCTATT
CTGGGAGCTGTGAGCGGATTCCGTGAAGCTAGAGGGCGCCGTTTGACGGA
TCAAGAGGTGGGTCCGCAAAGAGTTTGCCAGTCATGCCTCCCAAGATCTC
CAGAAATTGAGAACTATATTTTTCCTTTCCCATGTCCAGACAACGGCTGG
CTTCAGCAAAGGCGTTCGAAATCTCCTTGAAATGTTCAAGACATCAGCAA
AGCATGCATTGGTAATTTAGTACTATTTTTTGCCTTTGGAGAATGTGATA
GTAGATATTTCACATGGATGGAGCTTACGATTTTCCACGGGCATCCTCAT
CCGAGACTTTTTCTCTATAATTATTTTAGAATCCAACGCTGATGAATGAG
AGGATTGCGGAGCTTTCCAAGTCAGACGATCCAGAGATTCAGGTATGGAT
AGCAGTTCAGGCTAGAATTCAGGAAAAAATCAAGCCTTATCTTCTACGAT
ATGAACAGGATCTTTTTAAAGGTGCATCTGAAAATGATGAAGCCTCAGTC
TTGGAACTTAAGAATTTGGCAGCTCGGGACCTTTATCCGGGTAAAAAGGT
GGCGGCTGGTAATGATACGCAATCATCTACTTTGCTCATGATTTCATTCC
TGATTCTTCCGCAGGCGTTGATCTTGAAATTCTCCAAGACGTCATGAATA
GTTTAACCTTTGACAAGCTGCTGGATATACCCGAGATGGCTCGTTTCATT
GATCAGGATCCGTACATTTCGAGAGTTTTCCGGATGAATCAGTAAATCAA
GTAATTGCAGATGTATCTCAATAAAGTATTGATTTGGAAAACTTGTTGGA
AAAATTATGCAACGGATTCATGGAAAAGATCTTCGTCACAGAACTTCTTC
CATGATCTTTCAAAAAGTATCGTTCAGGCAACAAAATTGTAGTAAAAAGA
GCAATTAAAGGTTATGTCTTATCATTA back to topCoding sequence (CDS) from alignment at CM002470.1:701893..703719- >rna7204 ID=rna7204|Name=rna7204|organism=Nannochloropsis gaditana|type=CDS|length=6552bp|location=Sequence derived from alignment at CM002470.1:701893..703719- (Nannochloropsis gaditana)
GCGTTGATCTTGAAATTCTCCAAGACGTCATGAATAGTTTAACCTTTGAC
AAGCTGCTGGATATACCCGAGATGGCTCGTTTCATTGATCAGGATCCGTA
CATTTCGAGAGTTTTCCGGATGAATCAGTAAGATCTTTTTAAAGGTGCAT
CTGAAAATGATGAAGCCTCAGTCTTGGAACTTAAGAATTTGGCAGCTCGG
GACCTTTATCCGGAATCCAACGCTGATGAATGAGAGGATTGCGGAGCTTT
CCAAGTCAGACGATCCAGAGATTCAGACAACGGCTGGCTTCAGCAAAGGC
GTTCGAAATCTCCTTGAAATGTTCAAGACATCAGCAAAGCATGCATTGAG
CATTTTGGAAAATGTCGAGATTCAGCACCGAATTATCGAGGGAGTCCCTA
TTCTGGGAGCTGTGAGCGGATTCCGTGAAGCTAGAGGGCGCCGTTTGACG
GATCAAGAGTATTCGATCCTGTTGGTTCTCCGGGTAAGTCCGCTTTCTTT
CAGAAAGTCAAGAAAGATGGCATTGATTCTGTCGAGCTTTTCGAAACTTT
GTTCAAGAGCAAAGCGTTTGAGATGTCGTCATTTCGTGTTCGCCTTAAAC
GCTTGCTTTTGAAAAACTCGACATACTTTTCCCATGCCATTCTACGCGCG
ACAAAGCTGGACCCCTTTATCGTTCTCATCCCATGTTTCATAGTTGAAGT
CATTTCAAACGTTTCGCTTTGGTTTTTCAGGTCGATGGCGACGCTTCGAT
TTCTTGCTCTCCTCTTTTCCTGCTTCTACTTCTGCGTACGATGCCAGGGG
CAGAGGTTTTCTGATCTCAAGAATATGGCAGCTAATCAGAAGGGCGGCAT
TGTCACTGTAGGAAACGAATTCAAGGACCAAGCCGGCGAGAAGTTCAAGG
AAAGGACGGAAGAAGTAAAGTCTTCCCTGCAGGGCTGCGTTGATCTTGAA
ATTCTCCAAGACGTCATGAATAGTTTAACCTTTGACAAGCTGCTGGATAT
ACCCGAGATGGCTCGTTTCATTGATCAGGATCCGTACATTTCGAGAGTTT
TCCGGATGAATCAGTAAGATCTTTTTAAAGGTGCATCTGAAAATGATGAA
GCCTCAGTCTTGGAACTTAAGAATTTGGCAGCTCGGGACCTTTATCCGGA
ATCCAACGCTGATGAATGAGAGGATTGCGGAGCTTTCCAAGTCAGACGAT
CCAGAGATTCAGACAACGGCTGGCTTCAGCAAAGGCGTTCGAAATCTCCT
TGAAATGTTCAAGACATCAGCAAAGCATGCATTGAGCATTTTGGAAAATG
TCGAGATTCAGCACCGAATTATCGAGGGAGTCCCTATTCTGGGAGCTGTG
AGCGGATTCCGTGAAGCTAGAGGGCGCCGTTTGACGGATCAAGAGTATTC
GATCCTGTTGGTTCTCCGGGTAAGTCCGCTTTCTTTCAGAAAGTCAAGAA
AGATGGCATTGATTCTGTCGAGCTTTTCGAAACTTTGTTCAAGAGCAAAG
CGTTTGAGATGTCGTCATTTCGTGTTCGCCTTAAACGCTTGCTTTTGAAA
AACTCGACATACTTTTCCCATGCCATTCTACGCGCGACAAAGCTGGACCC
CTTTATCGTTCTCATCCCATGTTTCATAGTTGAAGTCATTTCAAACGTTT
CGCTTTGGTTTTTCAGGTCGATGGCGACGCTTCGATTTCTTGCTCTCCTC
TTTTCCTGCTTCTACTTCTGCGTACGATGCCAGGGGCAGAGGTTTTCTGA
TCTCAAGAATATGGCAGCTAATCAGAAGGGCGGCATTGTCACTGTAGGAA
ACGAATTCAAGGACCAAGCCGGCGAGAAGTTCAAGGAAAGGACGGAAGAA
GTAAAGTCTTCCCTGCAGGGCTGCGTTGATCTTGAAATTCTCCAAGACGT
CATGAATAGTTTAACCTTTGACAAGCTGCTGGATATACCCGAGATGGCTC
GTTTCATTGATCAGGATCCGTACATTTCGAGAGTTTTCCGGATGAATCAG
TAAGATCTTTTTAAAGGTGCATCTGAAAATGATGAAGCCTCAGTCTTGGA
ACTTAAGAATTTGGCAGCTCGGGACCTTTATCCGGAATCCAACGCTGATG
AATGAGAGGATTGCGGAGCTTTCCAAGTCAGACGATCCAGAGATTCAGAC
AACGGCTGGCTTCAGCAAAGGCGTTCGAAATCTCCTTGAAATGTTCAAGA
CATCAGCAAAGCATGCATTGAGCATTTTGGAAAATGTCGAGATTCAGCAC
CGAATTATCGAGGGAGTCCCTATTCTGGGAGCTGTGAGCGGATTCCGTGA
AGCTAGAGGGCGCCGTTTGACGGATCAAGAGTATTCGATCCTGTTGGTTC
TCCGGGTAAGTCCGCTTTCTTTCAGAAAGTCAAGAAAGATGGCATTGATT
CTGTCGAGCTTTTCGAAACTTTGTTCAAGAGCAAAGCGTTTGAGATGTCG
TCATTTCGTGTTCGCCTTAAACGCTTGCTTTTGAAAAACTCGACATACTT
TTCCCATGCCATTCTACGCGCGACAAAGCTGGACCCCTTTATCGTTCTCA
TCCCATGTTTCATAGTTGAAGTCATTTCAAACGTTTCGCTTTGGTTTTTC
AGGTCGATGGCGACGCTTCGATTTCTTGCTCTCCTCTTTTCCTGCTTCTA
CTTCTGCGTACGATGCCAGGGGCAGAGGTTTTCTGATCTCAAGAATATGG
CAGCTAATCAGAAGGGCGGCATTGTCACTGTAGGAAACGAATTCAAGGAC
CAAGCCGGCGAGAAGTTCAAGGAAAGGACGGAAGAAGTAAAGTCTTCCCT
GCAGGGCTGCGTTGATCTTGAAATTCTCCAAGACGTCATGAATAGTTTAA
CCTTTGACAAGCTGCTGGATATACCCGAGATGGCTCGTTTCATTGATCAG
GATCCGTACATTTCGAGAGTTTTCCGGATGAATCAGTAAGATCTTTTTAA
AGGTGCATCTGAAAATGATGAAGCCTCAGTCTTGGAACTTAAGAATTTGG
CAGCTCGGGACCTTTATCCGGAATCCAACGCTGATGAATGAGAGGATTGC
GGAGCTTTCCAAGTCAGACGATCCAGAGATTCAGACAACGGCTGGCTTCA
GCAAAGGCGTTCGAAATCTCCTTGAAATGTTCAAGACATCAGCAAAGCAT
GCATTGAGCATTTTGGAAAATGTCGAGATTCAGCACCGAATTATCGAGGG
AGTCCCTATTCTGGGAGCTGTGAGCGGATTCCGTGAAGCTAGAGGGCGCC
GTTTGACGGATCAAGAGTATTCGATCCTGTTGGTTCTCCGGGTAAGTCCG
CTTTCTTTCAGAAAGTCAAGAAAGATGGCATTGATTCTGTCGAGCTTTTC
GAAACTTTGTTCAAGAGCAAAGCGTTTGAGATGTCGTCATTTCGTGTTCG
CCTTAAACGCTTGCTTTTGAAAAACTCGACATACTTTTCCCATGCCATTC
TACGCGCGACAAAGCTGGACCCCTTTATCGTTCTCATCCCATGTTTCATA
GTTGAAGTCATTTCAAACGTTTCGCTTTGGTTTTTCAGGTCGATGGCGAC
GCTTCGATTTCTTGCTCTCCTCTTTTCCTGCTTCTACTTCTGCGTACGAT
GCCAGGGGCAGAGGTTTTCTGATCTCAAGAATATGGCAGCTAATCAGAAG
GGCGGCATTGTCACTGTAGGAAACGAATTCAAGGACCAAGCCGGCGAGAA
GTTCAAGGAAAGGACGGAAGAAGTAAAGTCTTCCCTGCAGGGCTGCGTTG
ATCTTGAAATTCTCCAAGACGTCATGAATAGTTTAACCTTTGACAAGCTG
CTGGATATACCCGAGATGGCTCGTTTCATTGATCAGGATCCGTACATTTC
GAGAGTTTTCCGGATGAATCAGTAAGATCTTTTTAAAGGTGCATCTGAAA
ATGATGAAGCCTCAGTCTTGGAACTTAAGAATTTGGCAGCTCGGGACCTT
TATCCGGAATCCAACGCTGATGAATGAGAGGATTGCGGAGCTTTCCAAGT
CAGACGATCCAGAGATTCAGACAACGGCTGGCTTCAGCAAAGGCGTTCGA
AATCTCCTTGAAATGTTCAAGACATCAGCAAAGCATGCATTGAGCATTTT
GGAAAATGTCGAGATTCAGCACCGAATTATCGAGGGAGTCCCTATTCTGG
GAGCTGTGAGCGGATTCCGTGAAGCTAGAGGGCGCCGTTTGACGGATCAA
GAGTATTCGATCCTGTTGGTTCTCCGGGTAAGTCCGCTTTCTTTCAGAAA
GTCAAGAAAGATGGCATTGATTCTGTCGAGCTTTTCGAAACTTTGTTCAA
GAGCAAAGCGTTTGAGATGTCGTCATTTCGTGTTCGCCTTAAACGCTTGC
TTTTGAAAAACTCGACATACTTTTCCCATGCCATTCTACGCGCGACAAAG
CTGGACCCCTTTATCGTTCTCATCCCATGTTTCATAGTTGAAGTCATTTC
AAACGTTTCGCTTTGGTTTTTCAGGTCGATGGCGACGCTTCGATTTCTTG
CTCTCCTCTTTTCCTGCTTCTACTTCTGCGTACGATGCCAGGGGCAGAGG
TTTTCTGATCTCAAGAATATGGCAGCTAATCAGAAGGGCGGCATTGTCAC
TGTAGGAAACGAATTCAAGGACCAAGCCGGCGAGAAGTTCAAGGAAAGGA
CGGAAGAAGTAAAGTCTTCCCTGCAGGGCTGCGTTGATCTTGAAATTCTC
CAAGACGTCATGAATAGTTTAACCTTTGACAAGCTGCTGGATATACCCGA
GATGGCTCGTTTCATTGATCAGGATCCGTACATTTCGAGAGTTTTCCGGA
TGAATCAGTAAGATCTTTTTAAAGGTGCATCTGAAAATGATGAAGCCTCA
GTCTTGGAACTTAAGAATTTGGCAGCTCGGGACCTTTATCCGGAATCCAA
CGCTGATGAATGAGAGGATTGCGGAGCTTTCCAAGTCAGACGATCCAGAG
ATTCAGACAACGGCTGGCTTCAGCAAAGGCGTTCGAAATCTCCTTGAAAT
GTTCAAGACATCAGCAAAGCATGCATTGAGCATTTTGGAAAATGTCGAGA
TTCAGCACCGAATTATCGAGGGAGTCCCTATTCTGGGAGCTGTGAGCGGA
TTCCGTGAAGCTAGAGGGCGCCGTTTGACGGATCAAGAGTATTCGATCCT
GTTGGTTCTCCGGGTAAGTCCGCTTTCTTTCAGAAAGTCAAGAAAGATGG
CATTGATTCTGTCGAGCTTTTCGAAACTTTGTTCAAGAGCAAAGCGTTTG
AGATGTCGTCATTTCGTGTTCGCCTTAAACGCTTGCTTTTGAAAAACTCG
ACATACTTTTCCCATGCCATTCTACGCGCGACAAAGCTGGACCCCTTTAT
CGTTCTCATCCCATGTTTCATAGTTGAAGTCATTTCAAACGTTTCGCTTT
GGTTTTTCAGGTCGATGGCGACGCTTCGATTTCTTGCTCTCCTCTTTTCC
TGCTTCTACTTCTGCGTACGATGCCAGGGGCAGAGGTTTTCTGATCTCAA
GAATATGGCAGCTAATCAGAAGGGCGGCATTGTCACTGTAGGAAACGAAT
TCAAGGACCAAGCCGGCGAGAAGTTCAAGGAAAGGACGGAAGAAGTAAAG
TCTTCCCTGCAGGGCTGCGTTGATCTTGAAATTCTCCAAGACGTCATGAA
TAGTTTAACCTTTGACAAGCTGCTGGATATACCCGAGATGGCTCGTTTCA
TTGATCAGGATCCGTACATTTCGAGAGTTTTCCGGATGAATCAGTAAGAT
CTTTTTAAAGGTGCATCTGAAAATGATGAAGCCTCAGTCTTGGAACTTAA
GAATTTGGCAGCTCGGGACCTTTATCCGGAATCCAACGCTGATGAATGAG
AGGATTGCGGAGCTTTCCAAGTCAGACGATCCAGAGATTCAGACAACGGC
TGGCTTCAGCAAAGGCGTTCGAAATCTCCTTGAAATGTTCAAGACATCAG
CAAAGCATGCATTGAGCATTTTGGAAAATGTCGAGATTCAGCACCGAATT
ATCGAGGGAGTCCCTATTCTGGGAGCTGTGAGCGGATTCCGTGAAGCTAG
AGGGCGCCGTTTGACGGATCAAGAGTATTCGATCCTGTTGGTTCTCCGGG
TAAGTCCGCTTTCTTTCAGAAAGTCAAGAAAGATGGCATTGATTCTGTCG
AGCTTTTCGAAACTTTGTTCAAGAGCAAAGCGTTTGAGATGTCGTCATTT
CGTGTTCGCCTTAAACGCTTGCTTTTGAAAAACTCGACATACTTTTCCCA
TGCCATTCTACGCGCGACAAAGCTGGACCCCTTTATCGTTCTCATCCCAT
GTTTCATAGTTGAAGTCATTTCAAACGTTTCGCTTTGGTTTTTCAGGTCG
ATGGCGACGCTTCGATTTCTTGCTCTCCTCTTTTCCTGCTTCTACTTCTG
CGTACGATGCCAGGGGCAGAGGTTTTCTGATCTCAAGAATATGGCAGCTA
ATCAGAAGGGCGGCATTGTCACTGTAGGAAACGAATTCAAGGACCAAGCC
GGCGAGAAGTTCAAGGAAAGGACGGAAGAAGTAAAGTCTTCCCTGCAGGG
CT back to top
|