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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100266g6.7302.mrna |
| Orig protein id | gnl|cribi|Naga_100266g6.7302 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:463006..465859 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7106 ID=rna7106|Name=rna7106|organism=Nannochloropsis gaditana|type=mRNA|length=1696bp
ACCCTTATGCTCCCATATAAATCCACATATATCGAAAGCCCAGGGCTCAC
AGACATAATTTTAAACGTTGAATAATTGCAACCATTCCATATCCACGCCC
AAGGCCTTGGGGCTTCCAGCTTTCCGTCCTCCTCCTCCCTCTTGCCCAAC
TCCTCCTTCCCCTCATGGGCATTCCCCTGGCTTCTTGTCCTCCGCCTCCA
CCACCCGCAGCCCTCCACCCTTCCCTACCTCCTCAGGAGTCTTCGAATTC
ACCTTCGAATGCGGCCTTGAGACGCTTTCGCATCCTGTTGGACGTGGACC
GGGACTATGAAATCGACAGCAGGGCCAAGACCGGTCCGAGGCGCTTTACT
TTGGAAGCCAGCACGCTGACCGAATTGAAAACTTCCATCTTTCTTGCTGA
GCAAAGCGAGAAAGAAAGTGAGGAAGGACTTGCAAAGGATATTGTAGGAC
AGCCCGCTAGGGACATGGAGCTCGAATGGTTCGACCCCCATGCCGAGGCC
TTTATGCCTCTTCCTACCGCCTTGACCGCCCTCCCCTCCCTCGTCCGCCT
CCGATGGAAGCAAAAGCAGTGTCGGGATATTCTATCATCTTCCTCTTCCC
CCGACAAGCCTGTCTTGGCCCTTCCGGGGCGGCGTTTCCCCCTCGACCTC
GACGGGGAGGGAATTCCCGTCCTCGACACTCGGATCTTTGTCAAGGGGGT
GGCCAATTCCGGGCTGGGCACTGGGCTTACCACGTGGGACGGCGCCGTTG
TCCTCAGCAAGTACCTGATCAAGCAGCACACCCATGCCACGGCTCGGTCC
CAGGCGCCAACGTTTGACTTTGAATTTGAATTTTTGAAAGGGAAGAAGGT
GGTGGAGCTTGGGGCGGGGACAGGGCTGGTGGGCCTGTCCTGCGCGGTGC
TGGGCGCCAGGGAAGTCATCTTGACAGACCTACCGTACGCTCTGGAGAAT
CTCAACGACAATGTCCGCAGGAACGTGGGGGCTTGGCGAGGCCTGGTTCA
GGGCCCACCGGGGGTAGGGAGGGAGGAGGGGAGGGTGGCGGTGGAGGAAG
GAGATTGGTTGCAGCCACCAGCGTCGTCTCTCGTGGAGGGGGTGGACGTG
GTGGTCGCTGCCGATGTAGTGTGGTTGGATGAGCTCGTGCCGCCCTTGGG
GAGGTACCTGGCGACGATACTCATGGGGGGAGGGCGGGAGGGAGGGAAGG
GAGGGGAGAGAAAGCGACAGATTTCAGAGTCATCGCCGGTCGGAGGGCCA
TCGGCAGGTATGGTTGTGCCTGGTCTGGAAAGACCCGGGAAAGGGGGGAA
CGAAACAGCCGAAAGCGGCGAAGAAGGCAGCGGGAAAGGCCAAGGTGGAA
AAGGAGGAGAGGAAGCAGGGGAGGGAAATCCAAAAAGCCGCAAAGAGTGG
AACTTTCCGGTTTGCTTCATGGCGTACCAGAGCCGTAGCGCCCAGACAGA
TGCGCTGTTGATGGCGACGATGAGGCAGGAAGGGCTGGTGGTGGAGGAGG
TGCCGGCGGAGGCCCAGGACGAGCAGTTTCGGGCGCCGGGAGTGATCCAC
GTGTACAAAATAAGGGCGGAGACAGGGTAGGGGGAGTGAAAAAGGCTGTT
AAGGCACTGTGAGCATAGTATTTGATGACGCATGCGTGCGAAATGTGTCG
AGATTTGGTGTGAAAATACGAAAGAGAACTGGCGCGAAATTATCCT back to topprotein sequence of rna7106 >rna7106-protein ID=rna7106-protein|Name=rna7106|organism=Nannochloropsis gaditana|type=polypeptide|length=306bp
MGDNLDRGPSPSATSSNASASKYTTVQATSTTASTHYEYTHPQNRMAQVA
LGQTAAAVIASSVVSPAMTVIDLSIIRAQFNKSSMGSALRSTTSDLLSGR
MRWNPALSIMSTVYTSTYLTANYTSALCQELGIDYKIPTAVATSLVNITA
IAYKDREFARMCSKAPTVFPLSCYGLFALRDGLTVTSSFVLKNTIKERLE
AEHGLSHNNADLAASFAVPMIAQLASTPLHILSLDIYSHPESPFRMRMKE
IAKGYMSVCSGRVLRIIPAFGVGGYLNDQVKESFEERENNREGKGVVIVP
LSSGEE back to topmRNA from alignment at CM002470.1:463006..465859+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7106 ID=rna7106|Name=rna7106|organism=Nannochloropsis gaditana|type=mRNA|length=2854bp|location=Sequence derived from alignment at CM002470.1:463006..465859+ (Nannochloropsis gaditana)
CGAACGAGACGCTCATCACATCGCGTCCCTCGCCCGTCGGCTCCACGATT
CGAGCAACGGGCATAGAAATAAGAGCCCTGGACTGCCTTCCTTGAcacct
tttcttccttcatttCTTTAATCGATTGATTTCCTCATATATATGTAGGT
CCAGTCAATCTATCACCAGCCCGGAATGGGAGACAACCTTGATCGGGGAC
CTTCACCATCTGCCACGTCGTCCAACGCCTCTGCAAGCAAGTATACAACA
GTCCAGGCGACCTCCACGACCGCCTCCACACATTATGAGTATACACATCC
GCAAAACCGCATGGCCCAGGTGGCTTTGGGACAgacagctgctgctgtga
TTGCTTCTTCAGTGGTTTCTCCGGCCATGACCGTCATTGATTTGTCCATG
TAAGTAACCATAGGCGTCCCTTTGGCATACCACAGAAAATTTAATGACGA
GGCGTCAAGTTACCGCGGACGGAAACGTCCCAGCAACAGCATTGAGAGCT
CTGTCATAGGGAAGGCGTGCCATAAATGATGCGTGCTGGCACCGGAATGT
AGTCTAGTGCGGTGCCACGGACTTGAATACGAAGGGGGATGCGCATCTTT
CTTGACAGCTTGGCACTACCACCGACGCCCTCGCACGGCAAAATTTTGCC
TTGTCCGCATCCAGACCCTCTGCAGCCATGCCtattcttttcccctcctg
caaACCATTACAGACATTCTGGACACCCGCAGGGCTGTCCATTTTAGATA
TAGATCGTTTCTATGCGTCTAACATGATGTGTTTTAtccccgctcccttt
ccttgtccttcctcccttagCATCCGGGCGCAATTCAACAAATCCTCCAT
GGGCTCGGCCCTCCGCTCCACTACCAGCGACCTGCTGAGCGGCCGCATGC
GATGGAACCCGGCCTTGAGTATCATGAGCACCGTCTATACGAGGTGCGTC
GTCTAGGCAtgttggacgaggagggagggagggagggagccatAAAAGCG
TCCCCGGCTTCACCGGGGCGACCGGGACAAGAAGGCAGAGGGGCGGCTAC
AAAGACGCATAGAAACACACGCACAGACTGACGCGTGAAATGAAGCTCAC
ACAGATCAAGCAAAACCTGTCCAGAACCATGTTGCAGACACGTTTTGGCC
CTAACAGCATACTTATGTCgtcccttgtccttctctctccctccctgtct
cgcCATGCACTCTCCTACCCCCAGCACCTACTTGACGGCCAACTATACAA
GCGCCCTCTGCCAGGAGCTTGGCATCGACTACAAGATACCCACAGCCGTA
GCCACATCTCTCGTGAACATCAcgtaggaagggaggagtaaccaagggag
gaaagaaggaatagAGACGAACAAaaacgaaggaagggattggggggcga
gagagcgAAGAGGCCGAAGGACTGGCGCTTGTCTTTCGACTTTACCGTTC
ATTCCCTTGTTCTCCAtgttcatcctcccctctccctccttgcttcgcAG
GGCGATCGCTTACAAGGACAGGGAGTTTGCGCGCATGTGCTCTAAGGTAG
CGtcggggtggtggagagaggaagggaggtggggagggaggaagggaacc
ggggaaagacgaggagaacAGCAACATGAACCCAGAAAGGCGGGAGTGCA
TTACACTATGTATATCGATCCCTTGACCGTCACGGACCTCGATTCCTTTT
TCcctacctctcctcccgcgtccAGGCACCGACTGTCTTCCCGCTGAGCT
GCTACggcctcttcgccctcagAGACGGCCTGACCGTCACGTCTTCCTTC
GTGCTCAAGGTGGGTTGGGAAAAACGGGgcgagggacggagggaggatag
gaTTCACCCGAGCCTAGTACGCAGCATGCAGCGGGATGGCAgtctccctg
cctcgtccaccttctTTTCTGCTCTTTCGTGCCCGCGCCCCTCTGGGTCC
TTTTTGCCCGCCTTGTTTCCTTGCTCACCCCGTACCATTGCCATCCTTTT
GTGTCCTTTGTATGCTCAGAACACGATCAAGGAACGTCTGGAAGCAGAGC
ACGGGCTCAGCCACAACAACGCCGACCTCGCCGCCTCGTTTGCGGTCCCC
ATGATCGCCCAGCTGGCCTCCACTCCCCTGCACATACTCTCTCTGGACAT
TTATTCTCATCCCGAGAGCCCGTTCCGGATGCGAATGAAGGAAATTGCCA
AGGGGTACATGTCTGTGTGCTCGGGGAGGGTCTTACGGATTATTCCCGCT
TTTGGGGTCGGTGGTTACTTGAACGATCAGGTCAAAGAGAGCTTTGAGGA
GCGGGAGAACAatagggaggggaaaggtgtCGTAATTGTGCCCCTGTCTT
CGGGGGAGGAGTGACAATAGAACGAGGCGGCGCCGAAGGATTTAGGTGCA
TGCGTAGGCGTATTGTTATTAAATATGAAACTATACTTGGTATTCAGGAC
GCTCTCTACCGTACGACGAAGCGCTCCGATCTCACACCTGTAGGTCTTCT
CACAAACTTACAAATATACCCAAATAAAATTCACTCAATTCGTAAACTAT
GGTGTCACGCCTGCGGGCATATACATCCGGCCCGATCGCCATGTACAAAT
GAGCAGGCCAAGCGGATATTAATAAGCATCATGGGGCAAGTTTTATGGGA
GCCAAAAATAGTCAGAAATGATGAATGATACCTTGAAAGCAAGCGAGAAC
TGGATATGTGCCATGCAGTTGTGCACTAGCCATGCGGGAAAAGTTTAGGG
CCTAAAGAGTACCAATGCATGTCTGTATCGAGGTAGCTCAAATGACAAGA
GTTTTTGAATGGTAAAACAGAAATTCCATATGCTTCTTTGCTTTTGGTCT
TATA back to topCoding sequence (CDS) from alignment at CM002470.1:463006..465859+ >rna7106 ID=rna7106|Name=rna7106|organism=Nannochloropsis gaditana|type=CDS|length=5526bp|location=Sequence derived from alignment at CM002470.1:463006..465859+ (Nannochloropsis gaditana)
ATGGGAGACAACCTTGATCGGGGACCTTCACCATCTGCCACGTCGTCCAA
CGCCTCTGCAAGCAAGTATACAACAGTCCAGGCGACCTCCACGACCGCCT
CCACACATTATGAGTATACACATCCGCAAAACCGCATGGCCCAGGTGGCT
TTGGGACAgacagctgctgctgtgaTTGCTTCTTCAGTGGTTTCTCCGGC
CATGACCGTCATTGATTTGTCCATCATCCGGGCGCAATTCAACAAATCCT
CCATGGGCTCGGCCCTCCGCTCCACTACCAGCGACCTGCTGAGCGGCCGC
ATGCGATGGAACCCGGCCTTGAGTATCATGAGCACCGTCTATACGAGCAC
CTACTTGACGGCCAACTATACAAGCGCCCTCTGCCAGGAGCTTGGCATCG
ACTACAAGATACCCACAGCCGTAGCCACATCTCTCGTGAACATCAcGGCG
ATCGCTTACAAGGACAGGGAGTTTGCGCGCATGTGCTCTAAGGCACCGAC
TGTCTTCCCGCTGAGCTGCTACggcctcttcgccctcagAGACGGCCTGA
CCGTCACGTCTTCCTTCGTGCTCAAGAACACGATCAAGGAACGTCTGGAA
GCAGAGCACGGGCTCAGCCACAACAACGCCGACCTCGCCGCCTCGTTTGC
GGTCCCCATGATCGCCCAGCTGGCCTCCACTCCCCTGCACATACTCTCTC
TGGACATTTATTCTCATCCCGAGAGCCCGTTCCGGATGCGAATGAAGGAA
ATTGCCAAGGGGTACATGTCTGTGTGCTCGGGGAGGGTCTTACGGATTAT
TCCCGCTTTTGGGGTCGGTGGTTACTTGAACGATCAGGTCAAAGAGAGCT
TTGAGGAGCGGGAGAACAatagggaggggaaaggtgtCGTAATTGTGCCC
CTGTCTTCGGGGGAGGAGTGAATGGGAGACAACCTTGATCGGGGACCTTC
ACCATCTGCCACGTCGTCCAACGCCTCTGCAAGCAAGTATACAACAGTCC
AGGCGACCTCCACGACCGCCTCCACACATTATGAGTATACACATCCGCAA
AACCGCATGGCCCAGGTGGCTTTGGGACAgacagctgctgctgtgaTTGC
TTCTTCAGTGGTTTCTCCGGCCATGACCGTCATTGATTTGTCCATCATCC
GGGCGCAATTCAACAAATCCTCCATGGGCTCGGCCCTCCGCTCCACTACC
AGCGACCTGCTGAGCGGCCGCATGCGATGGAACCCGGCCTTGAGTATCAT
GAGCACCGTCTATACGAGCACCTACTTGACGGCCAACTATACAAGCGCCC
TCTGCCAGGAGCTTGGCATCGACTACAAGATACCCACAGCCGTAGCCACA
TCTCTCGTGAACATCAcGGCGATCGCTTACAAGGACAGGGAGTTTGCGCG
CATGTGCTCTAAGGCACCGACTGTCTTCCCGCTGAGCTGCTACggcctct
tcgccctcagAGACGGCCTGACCGTCACGTCTTCCTTCGTGCTCAAGAAC
ACGATCAAGGAACGTCTGGAAGCAGAGCACGGGCTCAGCCACAACAACGC
CGACCTCGCCGCCTCGTTTGCGGTCCCCATGATCGCCCAGCTGGCCTCCA
CTCCCCTGCACATACTCTCTCTGGACATTTATTCTCATCCCGAGAGCCCG
TTCCGGATGCGAATGAAGGAAATTGCCAAGGGGTACATGTCTGTGTGCTC
GGGGAGGGTCTTACGGATTATTCCCGCTTTTGGGGTCGGTGGTTACTTGA
ACGATCAGGTCAAAGAGAGCTTTGAGGAGCGGGAGAACAatagggagggg
aaaggtgtCGTAATTGTGCCCCTGTCTTCGGGGGAGGAGTGAATGGGAGA
CAACCTTGATCGGGGACCTTCACCATCTGCCACGTCGTCCAACGCCTCTG
CAAGCAAGTATACAACAGTCCAGGCGACCTCCACGACCGCCTCCACACAT
TATGAGTATACACATCCGCAAAACCGCATGGCCCAGGTGGCTTTGGGACA
gacagctgctgctgtgaTTGCTTCTTCAGTGGTTTCTCCGGCCATGACCG
TCATTGATTTGTCCATCATCCGGGCGCAATTCAACAAATCCTCCATGGGC
TCGGCCCTCCGCTCCACTACCAGCGACCTGCTGAGCGGCCGCATGCGATG
GAACCCGGCCTTGAGTATCATGAGCACCGTCTATACGAGCACCTACTTGA
CGGCCAACTATACAAGCGCCCTCTGCCAGGAGCTTGGCATCGACTACAAG
ATACCCACAGCCGTAGCCACATCTCTCGTGAACATCAcGGCGATCGCTTA
CAAGGACAGGGAGTTTGCGCGCATGTGCTCTAAGGCACCGACTGTCTTCC
CGCTGAGCTGCTACggcctcttcgccctcagAGACGGCCTGACCGTCACG
TCTTCCTTCGTGCTCAAGAACACGATCAAGGAACGTCTGGAAGCAGAGCA
CGGGCTCAGCCACAACAACGCCGACCTCGCCGCCTCGTTTGCGGTCCCCA
TGATCGCCCAGCTGGCCTCCACTCCCCTGCACATACTCTCTCTGGACATT
TATTCTCATCCCGAGAGCCCGTTCCGGATGCGAATGAAGGAAATTGCCAA
GGGGTACATGTCTGTGTGCTCGGGGAGGGTCTTACGGATTATTCCCGCTT
TTGGGGTCGGTGGTTACTTGAACGATCAGGTCAAAGAGAGCTTTGAGGAG
CGGGAGAACAatagggaggggaaaggtgtCGTAATTGTGCCCCTGTCTTC
GGGGGAGGAGTGAATGGGAGACAACCTTGATCGGGGACCTTCACCATCTG
CCACGTCGTCCAACGCCTCTGCAAGCAAGTATACAACAGTCCAGGCGACC
TCCACGACCGCCTCCACACATTATGAGTATACACATCCGCAAAACCGCAT
GGCCCAGGTGGCTTTGGGACAgacagctgctgctgtgaTTGCTTCTTCAG
TGGTTTCTCCGGCCATGACCGTCATTGATTTGTCCATCATCCGGGCGCAA
TTCAACAAATCCTCCATGGGCTCGGCCCTCCGCTCCACTACCAGCGACCT
GCTGAGCGGCCGCATGCGATGGAACCCGGCCTTGAGTATCATGAGCACCG
TCTATACGAGCACCTACTTGACGGCCAACTATACAAGCGCCCTCTGCCAG
GAGCTTGGCATCGACTACAAGATACCCACAGCCGTAGCCACATCTCTCGT
GAACATCAcGGCGATCGCTTACAAGGACAGGGAGTTTGCGCGCATGTGCT
CTAAGGCACCGACTGTCTTCCCGCTGAGCTGCTACggcctcttcgccctc
agAGACGGCCTGACCGTCACGTCTTCCTTCGTGCTCAAGAACACGATCAA
GGAACGTCTGGAAGCAGAGCACGGGCTCAGCCACAACAACGCCGACCTCG
CCGCCTCGTTTGCGGTCCCCATGATCGCCCAGCTGGCCTCCACTCCCCTG
CACATACTCTCTCTGGACATTTATTCTCATCCCGAGAGCCCGTTCCGGAT
GCGAATGAAGGAAATTGCCAAGGGGTACATGTCTGTGTGCTCGGGGAGGG
TCTTACGGATTATTCCCGCTTTTGGGGTCGGTGGTTACTTGAACGATCAG
GTCAAAGAGAGCTTTGAGGAGCGGGAGAACAatagggaggggaaaggtgt
CGTAATTGTGCCCCTGTCTTCGGGGGAGGAGTGAATGGGAGACAACCTTG
ATCGGGGACCTTCACCATCTGCCACGTCGTCCAACGCCTCTGCAAGCAAG
TATACAACAGTCCAGGCGACCTCCACGACCGCCTCCACACATTATGAGTA
TACACATCCGCAAAACCGCATGGCCCAGGTGGCTTTGGGACAgacagctg
ctgctgtgaTTGCTTCTTCAGTGGTTTCTCCGGCCATGACCGTCATTGAT
TTGTCCATCATCCGGGCGCAATTCAACAAATCCTCCATGGGCTCGGCCCT
CCGCTCCACTACCAGCGACCTGCTGAGCGGCCGCATGCGATGGAACCCGG
CCTTGAGTATCATGAGCACCGTCTATACGAGCACCTACTTGACGGCCAAC
TATACAAGCGCCCTCTGCCAGGAGCTTGGCATCGACTACAAGATACCCAC
AGCCGTAGCCACATCTCTCGTGAACATCAcGGCGATCGCTTACAAGGACA
GGGAGTTTGCGCGCATGTGCTCTAAGGCACCGACTGTCTTCCCGCTGAGC
TGCTACggcctcttcgccctcagAGACGGCCTGACCGTCACGTCTTCCTT
CGTGCTCAAGAACACGATCAAGGAACGTCTGGAAGCAGAGCACGGGCTCA
GCCACAACAACGCCGACCTCGCCGCCTCGTTTGCGGTCCCCATGATCGCC
CAGCTGGCCTCCACTCCCCTGCACATACTCTCTCTGGACATTTATTCTCA
TCCCGAGAGCCCGTTCCGGATGCGAATGAAGGAAATTGCCAAGGGGTACA
TGTCTGTGTGCTCGGGGAGGGTCTTACGGATTATTCCCGCTTTTGGGGTC
GGTGGTTACTTGAACGATCAGGTCAAAGAGAGCTTTGAGGAGCGGGAGAA
CAatagggaggggaaaggtgtCGTAATTGTGCCCCTGTCTTCGGGGGAGG
AGTGAATGGGAGACAACCTTGATCGGGGACCTTCACCATCTGCCACGTCG
TCCAACGCCTCTGCAAGCAAGTATACAACAGTCCAGGCGACCTCCACGAC
CGCCTCCACACATTATGAGTATACACATCCGCAAAACCGCATGGCCCAGG
TGGCTTTGGGACAgacagctgctgctgtgaTTGCTTCTTCAGTGGTTTCT
CCGGCCATGACCGTCATTGATTTGTCCATCATCCGGGCGCAATTCAACAA
ATCCTCCATGGGCTCGGCCCTCCGCTCCACTACCAGCGACCTGCTGAGCG
GCCGCATGCGATGGAACCCGGCCTTGAGTATCATGAGCACCGTCTATACG
AGCACCTACTTGACGGCCAACTATACAAGCGCCCTCTGCCAGGAGCTTGG
CATCGACTACAAGATACCCACAGCCGTAGCCACATCTCTCGTGAACATCA
cGGCGATCGCTTACAAGGACAGGGAGTTTGCGCGCATGTGCTCTAAGGCA
CCGACTGTCTTCCCGCTGAGCTGCTACggcctcttcgccctcagAGACGG
CCTGACCGTCACGTCTTCCTTCGTGCTCAAGAACACGATCAAGGAACGTC
TGGAAGCAGAGCACGGGCTCAGCCACAACAACGCCGACCTCGCCGCCTCG
TTTGCGGTCCCCATGATCGCCCAGCTGGCCTCCACTCCCCTGCACATACT
CTCTCTGGACATTTATTCTCATCCCGAGAGCCCGTTCCGGATGCGAATGA
AGGAAATTGCCAAGGGGTACATGTCTGTGTGCTCGGGGAGGGTCTTACGG
ATTATTCCCGCTTTTGGGGTCGGTGGTTACTTGAACGATCAGGTCAAAGA
GAGCTTTGAGGAGCGGGAGAACAatagggaggggaaaggtgtCGTAATTG
TGCCCCTGTCTTCGGGGGAGGAGTGA back to top
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