EWM23582.1, cds7089 (CDS) Nannochloropsis gaditana

Overview
NameEWM23582.1
Unique Namecds7089
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:463181..463404 +
Alignment locationCM002470.1:463826..463948 +
Alignment locationCM002470.1:464230..464328 +
Alignment locationCM002470.1:464506..464551 +
Alignment locationCM002470.1:464731..464814 +
Alignment locationCM002470.1:465025..465369 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23582.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100266g6.7302.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:463181..463404 +
CM002470.1supercontigCM002470.1:463826..463948 +
CM002470.1supercontigCM002470.1:464230..464328 +
CM002470.1supercontigCM002470.1:464506..464551 +
CM002470.1supercontigCM002470.1:464731..464814 +
CM002470.1supercontigCM002470.1:465025..465369 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM23582.1 vs. NCBI_GenBank
Match: gi|585104721|gb|EWM23582.1| (hypothetical protein Naga_100266g6 [Nannochloropsis gaditana])

HSP 1 Score: 633.254 bits (1632), Expect = 0.000e+0
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
Query:    1 MGDNLDRGPSPSATSSNASASKYTTVQATSTTASTHYEYTHPQNRMAQVALGQTAAAVIASSVVSPAMTVIDLSIIRAQFNKSSMGSALRSTTSDLLSGRMRWNPALSIMSTVYTSTYLTANYTSALCQELGIDYKIPTAVATSLVNITAIAYKDREFARMCSKAPTVFPLSCYGLFALRDGLTVTSSFVLKNTIKERLEAEHGLSHNNADLAASFAVPMIAQLASTPLHILSLDIYSHPESPFRMRMKEIAKGYMSVCSGRVLRIIPAFGVGGYLNDQVKESFEERENNREGKGVVIVPLSSGEE 306
            MGDNLDRGPSPSATSSNASASKYTTVQATSTTASTHYEYTHPQNRMAQVALGQTAAAVIASSVVSPAMTVIDLSIIRAQFNKSSMGSALRSTTSDLLSGRMRWNPALSIMSTVYTSTYLTANYTSALCQELGIDYKIPTAVATSLVNITAIAYKDREFARMCSKAPTVFPLSCYGLFALRDGLTVTSSFVLKNTIKERLEAEHGLSHNNADLAASFAVPMIAQLASTPLHILSLDIYSHPESPFRMRMKEIAKGYMSVCSGRVLRIIPAFGVGGYLNDQVKESFEERENNREGKGVVIVPLSSGEE
Sbjct:    1 MGDNLDRGPSPSATSSNASASKYTTVQATSTTASTHYEYTHPQNRMAQVALGQTAAAVIASSVVSPAMTVIDLSIIRAQFNKSSMGSALRSTTSDLLSGRMRWNPALSIMSTVYTSTYLTANYTSALCQELGIDYKIPTAVATSLVNITAIAYKDREFARMCSKAPTVFPLSCYGLFALRDGLTVTSSFVLKNTIKERLEAEHGLSHNNADLAASFAVPMIAQLASTPLHILSLDIYSHPESPFRMRMKEIAKGYMSVCSGRVLRIIPAFGVGGYLNDQVKESFEERENNREGKGVVIVPLSSGEE 306          
BLAST of EWM23582.1 vs. NCBI_GenBank
Match: gi|585104723|gb|EWM23584.1| (hypothetical protein Naga_100266g4 [Nannochloropsis gaditana])

HSP 1 Score: 291.582 bits (745), Expect = 2.495e-93
Identity = 138/249 (55.42%), Postives = 181/249 (72.69%), Query Frame = 0
Query:   40 THPQNRMAQVALGQTAAAVIASSVVSPAMTVIDLSIIRAQFNKSSMGSALRSTTSDLLSGRMRWNPALSIMSTVYTSTYLTANYTSALCQELGIDYKIPTAVATSLVNITAIAYKDREFARMCSKAPTVFPLSCYGLFALRDGLTVTSSFVLKNTIKERLEAEHGLSHNNADLAASFAVPMIAQLASTPLHILSLDIYSHPESPFRMRMKEIAKGYMSVCSGRVLRIIPAFGVGGYLNDQVKESFEERE 288
            +HP N      LG   AAV+A S+VSP +TV+DL+I+R+QF+   +G+A++ T SDL +GR  WNPAL IM  VY STY+ AN T A C E GIDYKIPTAV TSLVNI  ++ KDR FARM  K+ + FPLS Y LF +RDG+TVTS+FVLKNT+++ L  +       AD+AASFAVPM+AQ+  TPLHIL++D+Y   ++ +  R++EI  GY +V  GRV+RI+PAFGVGG +ND VKE+FE+ E
Sbjct:  144 SHPAN----ATLGAITAAVVAGSLVSPMITVLDLAIVRSQFDHIGVGTAVKRTASDLYTGRASWNPALRIMGGVYLSTYMAANGTEAWCTENGIDYKIPTAVTTSLVNIVGVSLKDRAFARMMKKSASSFPLSSYLLFGIRDGMTVTSTFVLKNTVRDHLVEDLSFRPRYADIAASFAVPMLAQIPFTPLHILAMDLYVRKDATWLSRLQEIKSGYRNVLLGRVMRIVPAFGVGGVVNDMVKEAFEDEE 388          
BLAST of EWM23582.1 vs. NCBI_GenBank
Match: gi|669165062|ref|XP_008618093.1| (hypothetical protein SDRG_13773 [Saprolegnia diclina VS20] >gi|530730203|gb|EQC28445.1| hypothetical protein SDRG_13773 [Saprolegnia diclina VS20])

HSP 1 Score: 153.295 bits (386), Expect = 4.271e-41
Identity = 85/236 (36.02%), Postives = 132/236 (55.93%), Query Frame = 0
Query:   55 AAAVIASSVVSPAMTVIDLSIIRAQFNKSSMGSALRSTTSDLLSGRMRW--NPALSIMSTVYTSTYLTANYTSALCQELGIDYKIPTAVATSLVNITAIAYKDREFARMCSK-APTVFPLSCYGLFALRDGLTVTSSFVLKNTIKERLEAEHGLSHNNADLAASFAVPMIAQLASTPLHILSLDIYSHPESPFRMRMKEIAKGYMSVCSGRVLRIIPAFGVGGYLNDQVKESFEER 287
            AAA IAS  V+P +T +D ++I        +  AL   + D +   +++       ++  VYT+TYL+AN   +LC+ + +D  +P  ++T+ VN+ A   KDREF RM    APT FPL   GLFA+RD LTV +SF+    +  + + E G +   ++  A    PM+ Q  STPLH+LSLD+Y++   P   RM  I++ Y+     RV R++PAFG GG  N   +++   +
Sbjct:   49 AAAGIASFFVAPFITTVDRAVIENAAGARPLKKALVEISRDFVRNPLQFIRRKEFLLIYGVYTATYLSANAVDSLCETVEVDSNMPKFLSTTAVNMGACIIKDREFTRMFGVIAPTKFPLMSMGLFAIRDSLTVGASFIAPPILSAKFQ-ELGQTPRTSNTLAQLTCPMLVQFLSTPLHLLSLDLYNNKGVPMNQRMSFISREYIKSTGARVARVVPAFGFGGIGNKYFRDTMRTK 283          
BLAST of EWM23582.1 vs. NCBI_GenBank
Match: gi|698807614|ref|XP_009836836.1| (hypothetical protein H257_11558 [Aphanomyces astaci] >gi|574107901|gb|ETV73410.1| hypothetical protein H257_11558 [Aphanomyces astaci])

HSP 1 Score: 152.91 bits (385), Expect = 4.931e-41
Identity = 87/235 (37.02%), Postives = 129/235 (54.89%), Query Frame = 0
Query:   56 AAVIASSVVSPAMTVIDLSIIRAQFNKSSMGSALRSTTSDLLSGRMRW--NPALSIMSTVYTSTYLTANYTSALCQELGIDYKIPTAVATSLVNITAIAYKDREFARMCSK-APTVFPLSCYGLFALRDGLTVTSSFVLKNTIKERLEAEHGLSHNNADLAASFAVPMIAQLASTPLHILSLDIYSHPESPFRMRMKEIAKGYMSVCSGRVLRIIPAFGVGGYLNDQVKESFEER 287
            AA  AS  VSP +T ID +I+     K  +   LR  + D +   + +       ++  +Y +TY TAN    + +  G D  +P  + T+ VN+T    KDREFARM    APT FPL+  GLFA+RD L+V ++F+    I +  E + G+    A  +A    P +AQL STPLH+LSLDIY+H   P + R+  I++ Y+   + R+ R IPAFG+GG  N  ++E    +
Sbjct:   38 AACTASLFVSPIITTIDRAIMENASGKRVLAQGLREISHDFVRNPLAFIKRKDFLLIYGLYIATYGTANTIDTISEFAGTDSGMPKLIGTTAVNVTLCVAKDREFARMFGVIAPTKFPLASLGLFAMRDALSVGATFIAPPVIAKYFE-KAGMDKTTASSSALLLCPSLAQLVSTPLHLLSLDIYNHRSQPMKNRVSFISREYIRSATARISRTIPAFGLGGIGNKHLREELNAK 271          
BLAST of EWM23582.1 vs. NCBI_GenBank
Match: gi|1173929757|gb|OQR82934.1| (hypothetical protein ACHHYP_15310 [Achlya hypogyna])

HSP 1 Score: 151.754 bits (382), Expect = 1.049e-40
Identity = 86/234 (36.75%), Postives = 131/234 (55.98%), Query Frame = 0
Query:   55 AAAVIASSVVSPAMTVIDLSIIRAQFNKSSMGSALRSTTSDLLSGRMRW--NPALSIMSTVYTSTYLTANYTSALCQELGIDYKIPTAVATSLVNITAIAYKDREFARMCSK-APTVFPLSCYGLFALRDGLTVTSSFVLKNTIKERLEAEHGLSHNNADLAASFAVPMIAQLASTPLHILSLDIYSHPESPFRMRMKEIAKGYMSVCSGRVLRIIPAFGVGGYLNDQVKESFE 285
            A+A IAS  V+P +T +D +II        +  AL+  T D +   + +       ++  VYT+TY++AN    +C+ + +D K P  ++T+ VN+ A   KDREF RM    APT FPL+  GLFA+RD LTV +SF+    +  + + E G +   A+  A    PM+ Q  STPLH+L+LD+Y+H  S    R   I++ Y+   S RV R++PAFG GG  N   +++  
Sbjct:   32 ASAGIASFFVAPFITTVDRAIIENAAGARPLKQALKEITMDCIRNPLSFIRRKEFLLIYGVYTATYVSANAVDTVCETIEVDSKAPKFLSTTAVNMGACIIKDREFTRMFGVIAPTKFPLASMGLFAIRDSLTVGASFIAPPILAAKFQ-EIGQTPGMANTLAQLTCPMLVQFVSTPLHLLALDLYNHKSSKASERASFISREYIKSTSARVARVVPAFGFGGIGNKYFRDTLR 264          
BLAST of EWM23582.1 vs. NCBI_GenBank
Match: gi|552927784|gb|ESA11675.1| (hypothetical protein GLOINDRAFT_79841 [Rhizophagus irregularis DAOM 181602] >gi|595492316|gb|EXX75625.1| hypothetical protein RirG_040340 [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 150.984 bits (380), Expect = 1.958e-40
Identity = 89/232 (38.36%), Postives = 131/232 (56.47%), Query Frame = 0
Query:   56 AAVIASSVVSPAMTVIDLSIIRAQFNKSSMGSALRSTTSDLLS--GRMRWNPALSIMSTVYTSTYLTANYTSALCQELGIDYKIPTAVATSLVNITAIAYKDREFARMCSK-APTVFPLSCYGLFALRDGLTVTSSFVLKNTIKERLEAEHGLSHNN--ADLAASFAVPMIAQLASTPLHILSLDIYSHPESPFRMRMKEIAKGYMSVCSGRVLRIIPAFGVGGYLNDQVKE 282
            AA  AS +VSP +T++D SII     ++ +G+AL++   +LL+   R+   P+  ++  VY STY TAN    +C+ L  D + P  + T++ N+T   +KDR F RM    AP   PL+ YG+F  RD LT+ +SF + +T+    + + GL  N+  A  AA    P + QL S PLH+  LD Y+ P   F  R   I+K Y+     R++RI PAFG+GG  N  VKE
Sbjct:   20 AAASASFMVSPFITIVDRSIIENTSGRNKLGTALKNGFINLLTRPHRLIRAPSFLLVFGVYFSTYATANTIDTICERLEKDSQTPKFLGTTIANMTTCIFKDRAFTRMFGMVAPKGLPLASYGMFVARDALTIGASFNMPDTVAAEFQ-KRGLILNDEKAINAAQILCPAVVQLVSCPLHLFGLDYYNRPHVSFASRAGFISKLYIKTTLTRIVRIAPAFGIGGIGNRIVKE 250          
BLAST of EWM23582.1 vs. NCBI_GenBank
Match: gi|1173959620|gb|OQS05834.1| (hypothetical protein THRCLA_02077 [Thraustotheca clavata])

HSP 1 Score: 150.599 bits (379), Expect = 3.393e-40
Identity = 86/238 (36.13%), Postives = 130/238 (54.62%), Query Frame = 0
Query:   53 QTAAAVIASSVVSPAMTVIDLSIIRAQFNKSSMGSALRSTTSDLLSGRMRW--NPALSIMSTVYTSTYLTANYTSALCQELGIDYKIPTAVATSLVNITAIAYKDREFARMCSK-APTVFPLSCYGLFALRDGLTVTSSFVLKNTIKERLEAEHGLSHNNADLAASFAVPMIAQLASTPLHILSLDIYSHPESPFRMRMKEIAKGYMSVCSGRVLRIIPAFGVGGYLNDQVKESFEER 287
              AAA  AS  V+P +T +D +II        +  AL   + D +    ++       ++  VYT+TY++AN    +C+    D K+P   +T+ VN+ A   KDREF RM    APT FP     LFA+RD LTV +SF+    + ++ + EHG + + ++  A    PM+ Q  STPLH+LSLD+Y+H +S    RM  I++ Y    + RV R++PAFG GG  N   ++S  E+
Sbjct:   28 DVAAAGAASFFVAPFITTVDRAIIENAAGARPLKRALIEISMDFVRNPFKFVRRKEFLLIYGVYTATYVSANAVDTICEAAEADSKMPKFFSTTAVNMAACILKDREFTRMFGVIAPTNFPPLSMALFAVRDSLTVGASFIAPPYLSKKFQ-EHGQTPSTSNSLAQLICPMMVQFVSTPLHLLSLDLYNHKDSSTNKRMSFISREYFKSTAARVARVVPAFGFGGIGNKYFRDSMREK 264          
BLAST of EWM23582.1 vs. NCBI_GenBank
Match: gi|813189501|ref|XP_012207551.1| (hypothetical protein SPRG_13165 [Saprolegnia parasitica CBS 223.65] >gi|641527462|gb|KDO21749.1| hypothetical protein SPRG_13165 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 145.591 bits (366), Expect = 2.499e-38
Identity = 83/236 (35.17%), Postives = 130/236 (55.08%), Query Frame = 0
Query:   55 AAAVIASSVVSPAMTVIDLSIIRAQFNKSSMGSALRSTTSDLLSGRMRW--NPALSIMSTVYTSTYLTANYTSALCQELGIDYKIPTAVATSLVNITAIAYKDREFARMCSK-APTVFPLSCYGLFALRDGLTVTSSFVLKNTIKERLEAEHGLSHNNADLAASFAVPMIAQLASTPLHILSLDIYSHPESPFRMRMKEIAKGYMSVCSGRVLRIIPAFGVGGYLNDQVKESFEER 287
            AAA +AS  V+P +T +D ++I        +  AL   + D +   +++       ++  VYT+TYL+AN    LC+   +D  +P  ++T+ VN+ A   KDREF RM    APT FPL   GLFA+RD LTV +SF+    +  + + E G +   ++  A    PM+ Q  STPLH+LSLD+Y++       RM  I++ Y+   + RV R++PAFG GG  N   +++   +
Sbjct:   29 AAAGLASFFVAPFITTVDRAVIENAAGARPLKKALIEISKDCIRNPLQFIRRKEFLLIYGVYTATYLSANGVDTLCETAEVDSNMPKFLSTTAVNMGACIIKDREFTRMFGVIAPTKFPLMSMGLFAIRDSLTVGASFIAPPILSAKFQ-ELGQTPRTSNTLAQLTCPMLVQFLSTPLHLLSLDLYNNKGVAMGDRMSFISREYLKSTTARVARVVPAFGFGGIGNKYFRDTMRAK 263          
BLAST of EWM23582.1 vs. NCBI_GenBank
Match: gi|698807616|ref|XP_009836837.1| (hypothetical protein H257_11559 [Aphanomyces astaci] >gi|574107902|gb|ETV73411.1| hypothetical protein H257_11559 [Aphanomyces astaci])

HSP 1 Score: 142.895 bits (359), Expect = 3.959e-37
Identity = 79/220 (35.91%), Postives = 123/220 (55.91%), Query Frame = 0
Query:   66 PAMTVIDLSIIRAQFNKSSMGSALRSTTSDLLSGRMRW--NPALSIMSTVYTSTYLTANYTSALCQELGIDYKIPTAVATSLVNITAIAYKDREFARMCSK-APTVFPLSCYGLFALRDGLTVTSSFVLKNTIKERLEAEHGLSHNNADLAASFAVPMIAQLASTPLHILSLDIYSHPESPFRMRMKEIAKGYMSVCSGRVLRIIPAFGVGGYLNDQVKE 282
            P +T ID +II     K  +   ++  + D +   + +       ++  +Y +TY TAN    +   +  D K+P  + T+ VN+T    KDRE+ARM    APT FPL+  GLFA+RD L+V ++FV    +    EA+ G+S ++A   A    P +AQL STPLH+LSLD+Y+H  +    R+  I+K Y+   + R+ R +PAFGVGG  N  +++
Sbjct:   57 PTITAIDRAIIENASGKRVLIQGIKDISMDFVRNPLSFVRRKDFLLIYGLYVATYATANVIDTVSDVIESDSKLPKLIGTTAVNVTLCVAKDREYARMFGLFAPTKFPLASLGLFAMRDALSVGATFVAPPMVSHLFEAQLGMSESSAHSTALLVCPSLAQLISTPLHLLSLDLYNHKVATPHARLAFISKEYIKSAAARISRTLPAFGVGGIGNKHMRD 276          
BLAST of EWM23582.1 vs. NCBI_GenBank
Match: gi|675204627|ref|XP_008911198.1| (hypothetical protein PPTG_15665 [Phytophthora parasitica INRA-310] >gi|566015199|gb|ETI38110.1| hypothetical protein F443_16110 [Phytophthora parasitica P1569] >gi|567952657|gb|ETK78329.1| hypothetical protein L915_15655 [Phytophthora parasitica] >gi|567981317|gb|ETL31760.1| hypothetical protein L916_15551 [Phytophthora parasitica] >gi|568010805|gb|ETL84988.1| hypothetical protein L917_15373 [Phytophthora parasitica] >gi|568040709|gb|ETM38157.1| hypothetical protein L914_15506 [Phytophthora parasitica] >gi|568088568|gb|ETN03425.1| hypothetical protein PPTG_15665 [Phytophthora parasitica INRA-310] >gi|570318933|gb|ETO66881.1| hypothetical protein F444_16095 [Phytophthora parasitica P1976] >gi|570942737|gb|ETP07994.1| hypothetical protein F441_15939 [Phytophthora parasitica CJ01A1] >gi|570973377|gb|ETP36038.1| hypothetical protein F442_15961 [Phytophthora parasitica P10297] >gi|970658153|gb|KUF95954.1| putative membrane protein [Phytophthora nicotianae])

HSP 1 Score: 141.354 bits (355), Expect = 8.970e-37
Identity = 80/250 (32.00%), Postives = 133/250 (53.20%), Query Frame = 0
Query:   41 HPQNRMAQVALGQTAAAVIASSVVSPAMTVIDLSIIRAQFNKSSMGSALRSTTSDLLSGRMRW--NPALSIMSTVYTSTYLTANYTSALCQELGIDYKIPTAVATSLVNITAIAYKDREFARMCSK-APTVFPLSCYGLFALRDGLTVTSSFVLKNTIKERLEAEHGLSHNNADLAASFAVPMIAQLASTPLHILSLDIYSHPESPFRMRMKEIAKGYMSVCSGRVLRIIPAFGVGGYLNDQVKESFEER 287
            H   ++A+  +  TAAA+ AS  V+P +T++D +II        +G  L+  ++D L   +R+       ++  +YT+TY+TAN   ++C+    D ++P  + T+ VN++    KDR FARM    AP  FPL+  GLFA+RD +T  +SF     + +++E +  +  + A   A    P   Q  STPLH+L LD+Y++       R+  I + Y+     R+ RI PAFG+GG  N   + +   +
Sbjct:   11 HSPVKLAKQLVVDTAAAMAASLGVAPFITIVDRAIIENASGARPLGRGLKELSADFLKHPLRFVGKREFHLIFGLYTATYVTANVVDSVCEYGETDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDKGLMEKSGASTFAQLVCPAAVQFVSTPLHLLGLDLYNNKGHAMSQRVGFIRREYVKSVLARIGRIGPAFGIGGVGNAYFRNTLRAK 260          
The following BLAST results are available for this feature:
BLAST of EWM23582.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104721|gb|EWM23582.1|0.000e+0100.00hypothetical protein Naga_100266g6 [Nannochloropsi... [more]
gi|585104723|gb|EWM23584.1|2.495e-9355.42hypothetical protein Naga_100266g4 [Nannochloropsi... [more]
gi|669165062|ref|XP_008618093.1|4.271e-4136.02hypothetical protein SDRG_13773 [Saprolegnia dicli... [more]
gi|698807614|ref|XP_009836836.1|4.931e-4137.02hypothetical protein H257_11558 [Aphanomyces astac... [more]
gi|1173929757|gb|OQR82934.1|1.049e-4036.75hypothetical protein ACHHYP_15310 [Achlya hypogyna... [more]
gi|552927784|gb|ESA11675.1|1.958e-4038.36hypothetical protein GLOINDRAFT_79841 [Rhizophagus... [more]
gi|1173959620|gb|OQS05834.1|3.393e-4036.13hypothetical protein THRCLA_02077 [Thraustotheca c... [more]
gi|813189501|ref|XP_012207551.1|2.499e-3835.17hypothetical protein SPRG_13165 [Saprolegnia paras... [more]
gi|698807616|ref|XP_009836837.1|3.959e-3735.91hypothetical protein H257_11559 [Aphanomyces astac... [more]
gi|675204627|ref|XP_008911198.1|8.970e-3732.00hypothetical protein PPTG_15665 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7106rna7106Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications