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Properties
| Property Name | Value |
|---|
| Product | protease-associated RING/U-box zinc finger-containing protein |
| Orig transcript id | gnl|cribi|Naga_100191g7.7767.mrna |
| Orig protein id | gnl|cribi|Naga_100191g7.7767 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:299137..301089 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7039 ID=rna7039|Name=rna7039|organism=Nannochloropsis gaditana|type=mRNA|length=285bp
ATGTTAAAGCCGATACATTGGAAGACTATTTGGTGGTGCCCTGGCCTTAC
CATTGGATTGAAGCGTTCGGCGGCCTCGGCAGTCGACAACCGGGCACAAT
CGGGAGCCAGACCTGTGCCCCTTCCTGGGCCTGGAAAGACAATATCAAAT
ACCGCGCAAAATGCGCCGAACGCTAGCTACACTCTATGTGGCCGGTGTGG
TAGCTTCTCTGGGCTCGGGAAGGGCCTTGGTGGTGGATCAGCCGTGCTGC
TCCAAGCATCTTCACGTGTAAGTGAAAGCGCCTGA back to topprotein sequence of rna7039 >rna7039-protein ID=rna7039-protein|Name=rna7039|organism=Nannochloropsis gaditana|type=polypeptide|length=584bp
MRSTHCIKPAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDS
FFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSA
ARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGF
EGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLL
ALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSP
SALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRLE
SVPASGLGKARGGRSPCPLTGDGEAPTACEGVGASKDSWSEEEEQTTCAI
CLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCFSTVPRP
GGSERRGRQETAATTIALSSRAHERWEEGGGEGRRRQEREGSAQGPDSAT
YPPTLDVQILDEIVLFLTNNLSLLAMLLVGVVTCCVLLGAEKKLAPGVPS
SHRNIKNKGEERKAGIVQALAIAVESRQQSVVRIVAGGRRLGRDKCPQKP
STPGREMNVLPFRTRPSVDANARLVLSINSYPRK back to topmRNA from alignment at CM002470.1:299137..301089+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7039 ID=rna7039|Name=rna7039|organism=Nannochloropsis gaditana|type=mRNA|length=1953bp|location=Sequence derived from alignment at CM002470.1:299137..301089+ (Nannochloropsis gaditana)
ATGCGCTCTACACATTGTATAAAGTATTGTCTACTGGGAGGCGCAGGGCG
GACCACAACTTGTTTGTCTTTCTCTGGTCTCATATCTGAAACATCCTTTC
ATATCCTTTGACCATTTATACCATTGCTCGCTTATTCAAACCGACCCTTT
TCTAATCCCACACAAAGACCCGCCGCGTTCGGCCCCAATATCCTCGGTCT
GGAATCGCCCTTGCATGCCAGAGAACTTGTGATGGTGGAGCCTGAAGATG
CGTGCTCTGACCTTTTCCCAAGGAGAGCTTCCTACCAGgattcctttttt
tcttcctcctcaccatcttccctttccgctccctcGCTTCGAGGTAGAAT
CGCGCTGATCAAACGAAATGGATGCAATTTTACAGAAAAGGTGTGGCGAG
CCCAGCAAGCAGAGGCGGCGGGAGTCATCGTCTACGACTCGGCGGCCCGT
GAGCGGTGGGGGACCATCATGTcaggcgtggaggagtgGACGTCGCGCAT
CACCATCCCCTCGGTCTTCGTCTCGCACTCCACGGGGCTGAGCCTCAGGA
ACGCCGTTGCCCAGTCAGAACGCCAGTCCTCCGGGCCCGGTTTTGAGGGG
GCCGCGCGTGTCCGGGTCACTCTCAACGACACGGGCCACGTACGGGCCAA
GACGAAGCAGATTGGACCTATCGAGACCCTCGCCACCTACGTGGTCGTCT
CCCTCgttctgctttccttctccggctgttgcggcctcctcctcgccctc
tgcgTTACCTGCTACCAGCGAGCCTTTCGGCACCGGGCCCTTCGTGGGCT
CAAGGTGGAGAAATACCAACGTAAGAAAGTTAGCCAGCAGCCACTGCTTG
CCTACAACAGTAAAGACAAGGGCAGCAGCGCCTCGACatccccctctgcc
ctcttGTCGCGCGCGagccccacctccctccccgacagGCGCAAAGGCCT
GCGAGGCTTGTGGGGTCTCTTGAGCTTGCGACGCGTCATAAACAAGCAGC
GCTCAAGAATTCCGCTTCCACTACCTGCTCACCCGCGTCTGGAGTCCGTG
CCAGCCTCGGGTCTGGGGaaggcgcggggggggcgctctccttgccctct
cacgggagacggggaggcgcCGACGGCTTGTGAGGGGGTAGGAGCGTCGA
AGGACTCctggagcgaggaggaagagcagacTACATGTGCCATTTGCTTG
GACGAATATGAAGATGGCGATCTTCTGCGTTTTCTGCCGTGTCAGCACAG
ATATCACGACAAGTGTATCTTGCCCTGGTTGCTGGAGAAGTCCGAGGCCT
GCCCCATGTGCAAAAGGCCCTGCTTCTCGACGGTTCCACGACCCGGTGGC
agcgaaaggagaggaaggcaggagacaGCAGCCACCACGATAGCGCTATC
ATCTCGTGCGCATGagcgatgggaagaaggaggaggagagggtaggagaa
ggcaggagagggaaggcagcgCGCAGGGCCCAGACAGCGCAACGTATCCC
CCGACGCTCGACGTACAGATTTTAGATGAGATTGTGCTATTCTTAACAAA
CAACCTGTCGCTTTTAGCTATGCTCTTAGTAGGGGTGGTGACATGCTGCG
TTTTGCTCGGGGCAGTAGCGCTCTTGAGACCGAATGCCTGAAGTGCTTGG
AGATAATAGAGAACATAGGAAAAGAAACTAGCACCAGGTGTTCCATCCAG
CCACAGAAACATCAAAAacaaaggagaggaaaggaaggccggAATTGTAC
AGGCACTGGCCATCGCGGTAGAAAGCAGGCAGCAGTCCGTCGTGAGAATC
GTCgccgggggcaggaggttgggaAGAGATAAATGTCCTCAAAAACCGTC
GACACCAGGCAGGGAAATGAACGTGCTTCCATTTCGTACTCGTCCGAGTG
TCGATGCAAATGCGAGACTGGTCTTATCCATAAATTCTTATCCGCGAAAG
TAA back to topCoding sequence (CDS) from alignment at CM002470.1:299137..301089+ >rna7039 ID=rna7039|Name=rna7039|organism=Nannochloropsis gaditana|type=CDS|length=5265bp|location=Sequence derived from alignment at CM002470.1:299137..301089+ (Nannochloropsis gaditana)
ATGCGCTCTACACATTGTATAAAACCCGCCGCGTTCGGCCCCAATATCCT
CGGTCTGGAATCGCCCTTGCATGCCAGAGAACTTGTGATGGTGGAGCCTG
AAGATGCGTGCTCTGACCTTTTCCCAAGGAGAGCTTCCTACCAGgattcc
tttttttcttcctcctcaccatcttccctttccgctccctcGCTTCGAGG
TAGAATCGCGCTGATCAAACGAAATGGATGCAATTTTACAGAAAAGGTGT
GGCGAGCCCAGCAAGCAGAGGCGGCGGGAGTCATCGTCTACGACTCGGCG
GCCCGTGAGCGGTGGGGGACCATCATGTcaggcgtggaggagtgGACGTC
GCGCATCACCATCCCCTCGGTCTTCGTCTCGCACTCCACGGGGCTGAGCC
TCAGGAACGCCGTTGCCCAGTCAGAACGCCAGTCCTCCGGGCCCGGTTTT
GAGGGGGCCGCGCGTGTCCGGGTCACTCTCAACGACACGGGCCACGTACG
GGCCAAGACGAAGCAGATTGGACCTATCGAGACCCTCGCCACCTACGTGG
TCGTCTCCCTCgttctgctttccttctccggctgttgcggcctcctcctc
gccctctgcgTTACCTGCTACCAGCGAGCCTTTCGGCACCGGGCCCTTCG
TGGGCTCAAGGTGGAGAAATACCAACGTAAGAAAGTTAGCCAGCAGCCAC
TGCTTGCCTACAACAGTAAAGACAAGGGCAGCAGCGCCTCGACatccccc
tctgccctcttGTCGCGCGCGagccccacctccctccccgacagGCGCAA
AGGCCTGCGAGGCTTGTGGGGTCTCTTGAGCTTGCGACGCGTCATAAACA
AGCAGCGCTCAAGAATTCCGCTTCCACTACCTGCTCACCCGCGTCTGGAG
TCCGTGCCAGCCTCGGGTCTGGGGaaggcgcggggggggcgctctccttg
ccctctcacgggagacggggaggcgcCGACGGCTTGTGAGGGGGTAGGAG
CGTCGAAGGACTCctggagcgaggaggaagagcagacTACATGTGCCATT
TGCTTGGACGAATATGAAGATGGCGATCTTCTGCGTTTTCTGCCGTGTCA
GCACAGATATCACGACAAGTGTATCTTGCCCTGGTTGCTGGAGAAGTCCG
AGGCCTGCCCCATGTGCAAAAGGCCCTGCTTCTCGACGGTTCCACGACCC
GGTGGCagcgaaaggagaggaaggcaggagacaGCAGCCACCACGATAGC
GCTATCATCTCGTGCGCATGagcgatgggaagaaggaggaggagagggta
ggagaaggcaggagagggaaggcagcgCGCAGGGCCCAGACAGCGCAACG
TATCCCCCGACGCTCGACGTACAGATTTTAGATGAGATTGTGCTATTCTT
AACAAACAACCTGTCGCTTTTAGCTATGCTCTTAGTAGGGGTGGTGACAT
GCTGCGTTTTGCTCGGGGCAGAAAAGAAACTAGCACCAGGTGTTCCATCC
AGCCACAGAAACATCAAAAacaaaggagaggaaaggaaggccggAATTGT
ACAGGCACTGGCCATCGCGGTAGAAAGCAGGCAGCAGTCCGTCGTGAGAA
TCGTCgccgggggcaggaggttgggaAGAGATAAATGTCCTCAAAAACCG
TCGACACCAGGCAGGGAAATGAACGTGCTTCCATTTCGTACTCGTCCGAG
TGTCGATGCAAATGCGAGACTGGTCTTATCCATAAATTCTTATCCGCGAA
AGTAAATGCGCTCTACACATTGTATAAAACCCGCCGCGTTCGGCCCCAAT
ATCCTCGGTCTGGAATCGCCCTTGCATGCCAGAGAACTTGTGATGGTGGA
GCCTGAAGATGCGTGCTCTGACCTTTTCCCAAGGAGAGCTTCCTACCAGg
attcctttttttcttcctcctcaccatcttccctttccgctccctcGCTT
CGAGGTAGAATCGCGCTGATCAAACGAAATGGATGCAATTTTACAGAAAA
GGTGTGGCGAGCCCAGCAAGCAGAGGCGGCGGGAGTCATCGTCTACGACT
CGGCGGCCCGTGAGCGGTGGGGGACCATCATGTcaggcgtggaggagtgG
ACGTCGCGCATCACCATCCCCTCGGTCTTCGTCTCGCACTCCACGGGGCT
GAGCCTCAGGAACGCCGTTGCCCAGTCAGAACGCCAGTCCTCCGGGCCCG
GTTTTGAGGGGGCCGCGCGTGTCCGGGTCACTCTCAACGACACGGGCCAC
GTACGGGCCAAGACGAAGCAGATTGGACCTATCGAGACCCTCGCCACCTA
CGTGGTCGTCTCCCTCgttctgctttccttctccggctgttgcggcctcc
tcctcgccctctgcgTTACCTGCTACCAGCGAGCCTTTCGGCACCGGGCC
CTTCGTGGGCTCAAGGTGGAGAAATACCAACGTAAGAAAGTTAGCCAGCA
GCCACTGCTTGCCTACAACAGTAAAGACAAGGGCAGCAGCGCCTCGACat
ccccctctgccctcttGTCGCGCGCGagccccacctccctccccgacagG
CGCAAAGGCCTGCGAGGCTTGTGGGGTCTCTTGAGCTTGCGACGCGTCAT
AAACAAGCAGCGCTCAAGAATTCCGCTTCCACTACCTGCTCACCCGCGTC
TGGAGTCCGTGCCAGCCTCGGGTCTGGGGaaggcgcggggggggcgctct
ccttgccctctcacgggagacggggaggcgcCGACGGCTTGTGAGGGGGT
AGGAGCGTCGAAGGACTCctggagcgaggaggaagagcagacTACATGTG
CCATTTGCTTGGACGAATATGAAGATGGCGATCTTCTGCGTTTTCTGCCG
TGTCAGCACAGATATCACGACAAGTGTATCTTGCCCTGGTTGCTGGAGAA
GTCCGAGGCCTGCCCCATGTGCAAAAGGCCCTGCTTCTCGACGGTTCCAC
GACCCGGTGGCagcgaaaggagaggaaggcaggagacaGCAGCCACCACG
ATAGCGCTATCATCTCGTGCGCATGagcgatgggaagaaggaggaggaga
gggtaggagaaggcaggagagggaaggcagcgCGCAGGGCCCAGACAGCG
CAACGTATCCCCCGACGCTCGACGTACAGATTTTAGATGAGATTGTGCTA
TTCTTAACAAACAACCTGTCGCTTTTAGCTATGCTCTTAGTAGGGGTGGT
GACATGCTGCGTTTTGCTCGGGGCAGAAAAGAAACTAGCACCAGGTGTTC
CATCCAGCCACAGAAACATCAAAAacaaaggagaggaaaggaaggccggA
ATTGTACAGGCACTGGCCATCGCGGTAGAAAGCAGGCAGCAGTCCGTCGT
GAGAATCGTCgccgggggcaggaggttgggaAGAGATAAATGTCCTCAAA
AACCGTCGACACCAGGCAGGGAAATGAACGTGCTTCCATTTCGTACTCGT
CCGAGTGTCGATGCAAATGCGAGACTGGTCTTATCCATAAATTCTTATCC
GCGAAAGTAAATGCGCTCTACACATTGTATAAAACCCGCCGCGTTCGGCC
CCAATATCCTCGGTCTGGAATCGCCCTTGCATGCCAGAGAACTTGTGATG
GTGGAGCCTGAAGATGCGTGCTCTGACCTTTTCCCAAGGAGAGCTTCCTA
CCAGgattcctttttttcttcctcctcaccatcttccctttccgctccct
cGCTTCGAGGTAGAATCGCGCTGATCAAACGAAATGGATGCAATTTTACA
GAAAAGGTGTGGCGAGCCCAGCAAGCAGAGGCGGCGGGAGTCATCGTCTA
CGACTCGGCGGCCCGTGAGCGGTGGGGGACCATCATGTcaggcgtggagg
agtgGACGTCGCGCATCACCATCCCCTCGGTCTTCGTCTCGCACTCCACG
GGGCTGAGCCTCAGGAACGCCGTTGCCCAGTCAGAACGCCAGTCCTCCGG
GCCCGGTTTTGAGGGGGCCGCGCGTGTCCGGGTCACTCTCAACGACACGG
GCCACGTACGGGCCAAGACGAAGCAGATTGGACCTATCGAGACCCTCGCC
ACCTACGTGGTCGTCTCCCTCgttctgctttccttctccggctgttgcgg
cctcctcctcgccctctgcgTTACCTGCTACCAGCGAGCCTTTCGGCACC
GGGCCCTTCGTGGGCTCAAGGTGGAGAAATACCAACGTAAGAAAGTTAGC
CAGCAGCCACTGCTTGCCTACAACAGTAAAGACAAGGGCAGCAGCGCCTC
GACatccccctctgccctcttGTCGCGCGCGagccccacctccctccccg
acagGCGCAAAGGCCTGCGAGGCTTGTGGGGTCTCTTGAGCTTGCGACGC
GTCATAAACAAGCAGCGCTCAAGAATTCCGCTTCCACTACCTGCTCACCC
GCGTCTGGAGTCCGTGCCAGCCTCGGGTCTGGGGaaggcgcggggggggc
gctctccttgccctctcacgggagacggggaggcgcCGACGGCTTGTGAG
GGGGTAGGAGCGTCGAAGGACTCctggagcgaggaggaagagcagacTAC
ATGTGCCATTTGCTTGGACGAATATGAAGATGGCGATCTTCTGCGTTTTC
TGCCGTGTCAGCACAGATATCACGACAAGTGTATCTTGCCCTGGTTGCTG
GAGAAGTCCGAGGCCTGCCCCATGTGCAAAAGGCCCTGCTTCTCGACGGT
TCCACGACCCGGTGGCagcgaaaggagaggaaggcaggagacaGCAGCCA
CCACGATAGCGCTATCATCTCGTGCGCATGagcgatgggaagaaggagga
ggagagggtaggagaaggcaggagagggaaggcagcgCGCAGGGCCCAGA
CAGCGCAACGTATCCCCCGACGCTCGACGTACAGATTTTAGATGAGATTG
TGCTATTCTTAACAAACAACCTGTCGCTTTTAGCTATGCTCTTAGTAGGG
GTGGTGACATGCTGCGTTTTGCTCGGGGCAGAAAAGAAACTAGCACCAGG
TGTTCCATCCAGCCACAGAAACATCAAAAacaaaggagaggaaaggaagg
ccggAATTGTACAGGCACTGGCCATCGCGGTAGAAAGCAGGCAGCAGTCC
GTCGTGAGAATCGTCgccgggggcaggaggttgggaAGAGATAAATGTCC
TCAAAAACCGTCGACACCAGGCAGGGAAATGAACGTGCTTCCATTTCGTA
CTCGTCCGAGTGTCGATGCAAATGCGAGACTGGTCTTATCCATAAATTCT
TATCCGCGAAAGTAA back to top
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