EWM23657.1, cds7022 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|585104810|gb|EWM23657.1| (protease-associated RING/U-box zinc finger-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 1185.24 bits (3065), Expect = 0.000e+0 Identity = 584/584 (100.00%), Postives = 584/584 (100.00%), Query Frame = 0
Query: 1 MRSTHCIKPAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRLESVPASGLGKARGGRSPCPLTGDGEAPTACEGVGASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCFSTVPRPGGSERRGRQETAATTIALSSRAHERWEEGGGEGRRRQEREGSAQGPDSATYPPTLDVQILDEIVLFLTNNLSLLAMLLVGVVTCCVLLGAEKKLAPGVPSSHRNIKNKGEERKAGIVQALAIAVESRQQSVVRIVAGGRRLGRDKCPQKPSTPGREMNVLPFRTRPSVDANARLVLSINSYPRK 584
MRSTHCIKPAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRLESVPASGLGKARGGRSPCPLTGDGEAPTACEGVGASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCFSTVPRPGGSERRGRQETAATTIALSSRAHERWEEGGGEGRRRQEREGSAQGPDSATYPPTLDVQILDEIVLFLTNNLSLLAMLLVGVVTCCVLLGAEKKLAPGVPSSHRNIKNKGEERKAGIVQALAIAVESRQQSVVRIVAGGRRLGRDKCPQKPSTPGREMNVLPFRTRPSVDANARLVLSINSYPRK
Sbjct: 1 MRSTHCIKPAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRLESVPASGLGKARGGRSPCPLTGDGEAPTACEGVGASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCFSTVPRPGGSERRGRQETAATTIALSSRAHERWEEGGGEGRRRQEREGSAQGPDSATYPPTLDVQILDEIVLFLTNNLSLLAMLLVGVVTCCVLLGAEKKLAPGVPSSHRNIKNKGEERKAGIVQALAIAVESRQQSVVRIVAGGRRLGRDKCPQKPSTPGREMNVLPFRTRPSVDANARLVLSINSYPRK 584
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|299116310|emb|CBN76116.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 186.037 bits (471), Expect = 8.716e-49 Identity = 136/386 (35.23%), Postives = 186/386 (48.19%), Query Frame = 0
Query: 10 AAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRLESVPASGLGKARGGRSPCPLTGDGEAPTACEGVGASKDS-WSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCF 394
AAFGP++L E P+ +R LV +P D C L + D G IAL++R CNFT+KV AQ A A+ V+V D+ A ++W +M G E T I IP+V VSH+TG L + +S PG +G R+R ++ GH+ + +G +E L Y+++S++LL+FSG CGL+ AL T YQR +R RA+R LK ++R+ P L S G+S+S S RAS T D G AS LG +G A E +S D+ + E+ CAICL+ YEDGD L LPC+H +H +CI PWL KS CPMCK F
Sbjct: 124 AAFGPDVLSAEPPVESRPLVRAKPRDGCVPLH----NAMD----------------EGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWS------NRSWLPGRQG--RLRASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRAMRKLKSFTFRRRP--PPPTLGNQSDPAGTSSSNS-----GRASGTV--DATTG----------------------------------QASSLG-------------NGTGSAASEDNSSSNDNGFMRREDDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAF 425
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|1183490751|gb|ORZ14439.1| (hypothetical protein BCR41DRAFT_354880 [Lobosporangium transversale]) HSP 1 Score: 105.145 bits (261), Expect = 4.397e-20 Identity = 104/370 (28.11%), Postives = 155/370 (41.89%), Query Frame = 0
Query: 68 RIALIKRNG------CNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYV-VVSLVLLSFSGCCGLLLALCVTCYQRAFRHRAL-RG--------LKVEKYQRKKVSQQ--PLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRLESVPA--SGLGKARGGRSPCPLTGDGEAPTACEGV-GASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCFSTVPRPGGSERRGRQETAATTI 416
RIALI+R G C F K+ AQ + I+Y+ + + + +E S + IP V +SH GL L+N + Q+ Q+SG T++ VR K I + +V +V +V+L+ S +L + ++ R AL RG +++ K K + P+ Y S A+ S SPT ++G +L R I+ S +SV + + S L+ PT GV G S D TCA+C+DE+ +G+ +R LPC H +H +CI PWL+ KS CP+CK C PR E GR E A I
Sbjct: 113 RIALIQRGGPNTNDACTFRTKILHAQANNSIAAIIYNGPSTTAINSATAALENGESPLEIPGVLISHEDGLMLKNLLQQT--QNSG-----------TVDFFNRVRISMKLEDKIPVIWEFVLIVVVVMLAISLTVSAVLHCRLYALRQRIRMDALARGADVLPNGTIRMRKVTLDKATLDGLPVRIYRQPRSSSIAAVS--------SPTGAAATQEGQSKTLTAATLSRSISNGGSI---------SGQSVRSQRAVAAATALNASTHSLSNPASTPTPVNGVEGISDD---------TCAVCIDEFVEGEEIRMLPCHHEFHCECIDPWLIRKSSTCPLCKYDCL---PR-TEEEIEGRGEDANIVI 439
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|673046043|ref|XP_008876982.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574467197|gb|ETV94221.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 94.7449 bits (234), Expect = 1.027e-17 Identity = 78/224 (34.82%), Postives = 104/224 (46.43%), Query Frame = 0
Query: 9 PAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAAR---ERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGH-VRAKTKQIGPIETLATYVV-VSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRK 227
PA FG N+ RE+V VEP DAC+ Q+ L G+IALI R CNF KVW+AQ+A A V+V D R E W M G +++ S + IPSVFVSH TG NA+ +S V VT+N TGH + + +E + Y + S + L SG C + + + YQR R RA + L V Y+ K
Sbjct: 14 PALFGANVSN-HVDFVRREIVKVEPFDACT------GDIQND--------------LSGKIALILRGECNFAWKVWQAQKANAIAVVVMDVQPRTPHELWEVQMVG-DKYASDVHIPSVFVSHETG----NAILESLEDQV---------VLVTMNATGHRTSLQRRHHTVLEGVVLYALSTSAMFLVLSGVC-FVFSNAASWYQRTERTRAAKRLPVMAYETK 201 HSP 2 Score: 63.929 bits (154), Expect = 1.723e-7 Identity = 23/50 (46.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query: 342 EEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKR 391
+++ +TCAICL+ +E L++ LPC+H +H CI PWL ++S CP+CK+
Sbjct: 203 DDDDSTCAICLELFEKKVLVKMLPCRHEFHHTCIDPWLEKQSSQCPLCKQ 252
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|673046045|ref|XP_008876983.1| (hypothetical protein H310_11904 [Aphanomyces invadans] >gi|574467196|gb|ETV94220.1| hypothetical protein H310_11904 [Aphanomyces invadans]) HSP 1 Score: 93.9745 bits (232), Expect = 2.594e-17 Identity = 78/224 (34.82%), Postives = 104/224 (46.43%), Query Frame = 0
Query: 9 PAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAAR---ERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGH-VRAKTKQIGPIETLATYVV-VSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRK 227
PA FG N+ RE+V VEP DAC+ Q+ L G+IALI R CNF KVW+AQ+A A V+V D R E W M G +++ S + IPSVFVSH TG NA+ +S V VT+N TGH + + +E + Y + S + L SG C + + + YQR R RA + L V Y+ K
Sbjct: 38 PALFGANVSN-HVDFVRREIVKVEPFDACT------GDIQND--------------LSGKIALILRGECNFAWKVWQAQKANAIAVVVMDVQPRTPHELWEVQMVG-DKYASDVHIPSVFVSHETG----NAILESLEDQV---------VLVTMNATGHRTSLQRRHHTVLEGVVLYALSTSAMFLVLSGVC-FVFSNAASWYQRTERTRAAKRLPVMAYETK 225 HSP 2 Score: 63.929 bits (154), Expect = 2.253e-7 Identity = 23/50 (46.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query: 342 EEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKR 391
+++ +TCAICL+ +E L++ LPC+H +H CI PWL ++S CP+CK+
Sbjct: 227 DDDDSTCAICLELFEKKVLVKMLPCRHEFHHTCIDPWLEKQSSQCPLCKQ 276
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|672822516|gb|KFH67410.1| (hypothetical protein MVEG_06143 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 95.1301 bits (235), Expect = 6.025e-17 Identity = 103/379 (27.18%), Postives = 158/379 (41.69%), Query Frame = 0
Query: 58 SSLSAPSLRG--RIALIKRNG------CNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRA-----LRG--------LKVEKYQRKKVSQQPLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRL---ESVPASGLGKARGGRSPCPLTGDGEAPTACEGVGASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCFSTVPRPGGSERRGRQETA 412
++L P+L G +IALI+R G C F +K+ AQ A ++Y+ + + E S + IP + + + +G++LR + Q SS E A R+R+ L +++ I VVV L+ +SF+ +++ + C A R R RG + + K K + SS S++P A P S+ D K L L L S + S+ + A PR S+ S G++ G P L D E CA+CLDE+E+G+ +R LPC H +H +CI PWL KS CP+CK C +P P G Q++A
Sbjct: 77 TTLPTPNLFGFSKIALIRRGGPTESEVCTFRQKLIIAQSDGAIAALIYNKPGATSLDGATAALSEADSPVGIPGLMIGYDSGINLRTLLQQMNTSSSP---ENANRMRIGL-------WPDQRMPVIWEFVLIVVVVLLGVSFT------VSVVLHCRLYALRQRVRMDALARGTDIPTEGTIHMRKLTLDKAALDDFPVRIFHQGSSSGSSAP-----MAKPNSV-DETKALPPLAQLTSDTTEATEGTSKSEKDVKAPPRRSRPNSIHCSIKGESDGVIYPASLDMDIEL------------------TNDMCAVCLDEFEEGEEIRMLPCHHEFHCECIDPWLTRKSPTCPLCKHNC---LPPP---SEEGNQDSA 409
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|669152118|ref|XP_008611621.1| (hypothetical protein SDRG_07561 [Saprolegnia diclina VS20] >gi|530736507|gb|EQC34749.1| hypothetical protein SDRG_07561 [Saprolegnia diclina VS20]) HSP 1 Score: 88.1965 bits (217), Expect = 2.450e-15 Identity = 74/245 (30.20%), Postives = 104/245 (42.45%), Query Frame = 0
Query: 9 PAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAAR---ERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSP 250
PA FG NI L E+V P DAC D+ + GRI L+ R CNF K +AQ+A A+ ++V D + E WG M + S I IPSVFV++ TG +L +AQ ++ ++ P VTLN TG A +Q E + YV+ + V+ +L+ V YQ+ R RA R L + +Y K + S D G P
Sbjct: 50 PAHFGRNISDDIPELLHGEIVSARPFDACGDVIENDVA--------------------GRIVLVVRGKCNFAYKALQAQKANASAIVVMDDKPKVHDEVWGVHMIS-DGNASDIVIPSVFVAYQTGAAL---LAQLQQDANLPPL-------VTLNSTGQGVATFRQHSIFEGIVLYVLSTSVMFVLLSALCFVLSKIVAWYQQTARTRAARRLPLRQYHVKADEDVCSICLESFDDGVWLKVLP 263 HSP 2 Score: 63.929 bits (154), Expect = 2.731e-7 Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 0
Query: 339 WSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKR 391
+ + ++ C+ICL+ ++DG L+ LPC H +H CI PWL ++ CP+CKR
Sbjct: 237 YHVKADEDVCSICLESFDDGVWLKVLPCDHEFHQGCIDPWLQHRNGNCPLCKR 289
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|595442964|gb|EXX54707.1| (hypothetical protein RirG_232040 [Rhizophagus irregularis DAOM 197198w]) HSP 1 Score: 89.3521 bits (220), Expect = 5.489e-15 Identity = 47/127 (37.01%), Postives = 68/127 (53.54%), Query Frame = 0
Query: 277 SLRRVINKQ---RSRIPLPLPAHPRLESVPAS-----GLGKARGGRSPCPLTGDGEAPTACEGVGASKDSW-SEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCF 394
S+ ++N++ ++ P L H ++S A+ + AR +S A CEG G + D + S+ T CAICLDE+E+GD LR LPC H +H +CI PWL +KS CP+CK C
Sbjct: 384 SISSILNRKVSIKADYPTALSRHVSVKSQRAALSRHVSVRSARSTKSTRSENAISAATALCEGSGVNVDDYDSQIHYNTMCAICLDEFENGDQLRALPCGHEFHSECIDPWLTQKSSLCPLCKFDCI 510
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|813135384|ref|XP_012198472.1| (hypothetical protein SPRG_04675 [Saprolegnia parasitica CBS 223.65] >gi|641536903|gb|KDO30774.1| hypothetical protein SPRG_04675 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 86.2705 bits (212), Expect = 9.845e-15 Identity = 74/246 (30.08%), Postives = 104/246 (42.28%), Query Frame = 0
Query: 8 KPAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAAR---ERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSP 250
+PA FG NI L E+V P DAC D + GRI L+ R CNF K +AQ+A A+ ++V D + E WG M + S I IPSVFV++ TG +L +AQ ++ S P VTLN TG A +Q E + YV+ + V+ +L+ V YQ++ R RA R L + +Y K + + D G P
Sbjct: 21 RPAHFGRNISDDIPELLRGEIVSARPFDACGDAIENDVA--------------------GRIVLVVRGKCNFAYKALQAQKANASAIVVMDDKPKVHDEVWGVHMIS-DGNVSAIVIPSVFVAYQTGEAL---LAQLKQADSLPPL-------VTLNSTGQGVATFRQHSIFEGIVLYVLSTSVMFVLLSALCFVLSKIVAWYQQSARTRAARRLPMRQYHVKSDEDVCSICLETFDDGVWLKVLP 235 HSP 2 Score: 65.0846 bits (157), Expect = 8.027e-8 Identity = 22/50 (44.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query: 342 EEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKR 391
+ ++ C+ICL+ ++DG L+ LPC H +H +CI PWL ++ CP+CKR
Sbjct: 212 KSDEDVCSICLETFDDGVWLKVLPCDHEFHQECIDPWLQHRNGNCPLCKR 261
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|821098907|ref|XP_012379371.1| (PREDICTED: E3 ubiquitin-protein ligase RNF167 isoform X4 [Dasypus novemcinctus]) HSP 1 Score: 82.4185 bits (202), Expect = 6.798e-14 Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0
Query: 339 WSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRP 392
W+ ++ CAICLDEYEDGD LR LPC H YH +C+ PWL + + CP+CK+P
Sbjct: 124 WNSGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQP 177 The following BLAST results are available for this feature:
BLAST of EWM23657.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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