EWM23657.1, cds7022 (CDS) Nannochloropsis gaditana

Overview
NameEWM23657.1
Unique Namecds7022
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:299137..299159 +
Alignment locationCM002470.1:299304..300750 +
Alignment locationCM002470.1:300805..301089 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23657.1
Productprotease-associated RING/U-box zinc finger-containing protein
Orig transcript idgnl|cribi|Naga_100191g7.7767.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:299137..299159 +
CM002470.1supercontigCM002470.1:299304..300750 +
CM002470.1supercontigCM002470.1:300805..301089 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR003137Protease-assoc_domain
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
Homology
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|585104810|gb|EWM23657.1| (protease-associated RING/U-box zinc finger-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 1185.24 bits (3065), Expect = 0.000e+0
Identity = 584/584 (100.00%), Postives = 584/584 (100.00%), Query Frame = 0
Query:    1 MRSTHCIKPAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRLESVPASGLGKARGGRSPCPLTGDGEAPTACEGVGASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCFSTVPRPGGSERRGRQETAATTIALSSRAHERWEEGGGEGRRRQEREGSAQGPDSATYPPTLDVQILDEIVLFLTNNLSLLAMLLVGVVTCCVLLGAEKKLAPGVPSSHRNIKNKGEERKAGIVQALAIAVESRQQSVVRIVAGGRRLGRDKCPQKPSTPGREMNVLPFRTRPSVDANARLVLSINSYPRK 584
            MRSTHCIKPAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRLESVPASGLGKARGGRSPCPLTGDGEAPTACEGVGASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCFSTVPRPGGSERRGRQETAATTIALSSRAHERWEEGGGEGRRRQEREGSAQGPDSATYPPTLDVQILDEIVLFLTNNLSLLAMLLVGVVTCCVLLGAEKKLAPGVPSSHRNIKNKGEERKAGIVQALAIAVESRQQSVVRIVAGGRRLGRDKCPQKPSTPGREMNVLPFRTRPSVDANARLVLSINSYPRK
Sbjct:    1 MRSTHCIKPAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRLESVPASGLGKARGGRSPCPLTGDGEAPTACEGVGASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCFSTVPRPGGSERRGRQETAATTIALSSRAHERWEEGGGEGRRRQEREGSAQGPDSATYPPTLDVQILDEIVLFLTNNLSLLAMLLVGVVTCCVLLGAEKKLAPGVPSSHRNIKNKGEERKAGIVQALAIAVESRQQSVVRIVAGGRRLGRDKCPQKPSTPGREMNVLPFRTRPSVDANARLVLSINSYPRK 584          
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|299116310|emb|CBN76116.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 186.037 bits (471), Expect = 8.716e-49
Identity = 136/386 (35.23%), Postives = 186/386 (48.19%), Query Frame = 0
Query:   10 AAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRLESVPASGLGKARGGRSPCPLTGDGEAPTACEGVGASKDS-WSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCF 394
            AAFGP++L  E P+ +R LV  +P D C  L     +  D                 G IAL++R  CNFT+KV  AQ A A+ V+V D+ A ++W  +M G  E T  I IP+V VSH+TG  L +       +S  PG +G  R+R ++   GH+    + +G +E L  Y+++S++LL+FSG CGL+ AL  T YQR +R RA+R LK   ++R+     P L   S   G+S+S S      RAS T   D   G                                   AS LG             +G    A E   +S D+ +   E+   CAICL+ YEDGD L  LPC+H +H +CI PWL  KS  CPMCK   F
Sbjct:  124 AAFGPDVLSAEPPVESRPLVRAKPRDGCVPLH----NAMD----------------EGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWS------NRSWLPGRQG--RLRASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRAMRKLKSFTFRRRP--PPPTLGNQSDPAGTSSSNS-----GRASGTV--DATTG----------------------------------QASSLG-------------NGTGSAASEDNSSSNDNGFMRREDDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAF 425          
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|1183490751|gb|ORZ14439.1| (hypothetical protein BCR41DRAFT_354880 [Lobosporangium transversale])

HSP 1 Score: 105.145 bits (261), Expect = 4.397e-20
Identity = 104/370 (28.11%), Postives = 155/370 (41.89%), Query Frame = 0
Query:   68 RIALIKRNG------CNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYV-VVSLVLLSFSGCCGLLLALCVTCYQRAFRHRAL-RG--------LKVEKYQRKKVSQQ--PLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRLESVPA--SGLGKARGGRSPCPLTGDGEAPTACEGV-GASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCFSTVPRPGGSERRGRQETAATTI 416
            RIALI+R G      C F  K+  AQ   +   I+Y+  +     +  + +E   S + IP V +SH  GL L+N + Q+  Q+SG           T++    VR   K    I  +  +V +V +V+L+ S     +L   +   ++  R  AL RG        +++ K    K +    P+  Y      S A+ S        SPT     ++G        +L R I+   S            +SV +  +         S   L+     PT   GV G S D         TCA+C+DE+ +G+ +R LPC H +H +CI PWL+ KS  CP+CK  C    PR    E  GR E A   I
Sbjct:  113 RIALIQRGGPNTNDACTFRTKILHAQANNSIAAIIYNGPSTTAINSATAALENGESPLEIPGVLISHEDGLMLKNLLQQT--QNSG-----------TVDFFNRVRISMKLEDKIPVIWEFVLIVVVVMLAISLTVSAVLHCRLYALRQRIRMDALARGADVLPNGTIRMRKVTLDKATLDGLPVRIYRQPRSSSIAAVS--------SPTGAAATQEGQSKTLTAATLSRSISNGGSI---------SGQSVRSQRAVAAATALNASTHSLSNPASTPTPVNGVEGISDD---------TCAVCIDEFVEGEEIRMLPCHHEFHCECIDPWLIRKSSTCPLCKYDCL---PR-TEEEIEGRGEDANIVI 439          
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|673046043|ref|XP_008876982.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574467197|gb|ETV94221.1| hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 94.7449 bits (234), Expect = 1.027e-17
Identity = 78/224 (34.82%), Postives = 104/224 (46.43%), Query Frame = 0
Query:    9 PAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAAR---ERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGH-VRAKTKQIGPIETLATYVV-VSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRK 227
            PA FG N+         RE+V VEP DAC+         Q+               L G+IALI R  CNF  KVW+AQ+A A  V+V D   R   E W   M G +++ S + IPSVFVSH TG    NA+ +S              V VT+N TGH    + +    +E +  Y +  S + L  SG C  + +   + YQR  R RA + L V  Y+ K
Sbjct:   14 PALFGANVSN-HVDFVRREIVKVEPFDACT------GDIQND--------------LSGKIALILRGECNFAWKVWQAQKANAIAVVVMDVQPRTPHELWEVQMVG-DKYASDVHIPSVFVSHETG----NAILESLEDQV---------VLVTMNATGHRTSLQRRHHTVLEGVVLYALSTSAMFLVLSGVC-FVFSNAASWYQRTERTRAAKRLPVMAYETK 201          

HSP 2 Score: 63.929 bits (154), Expect = 1.723e-7
Identity = 23/50 (46.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:  342 EEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKR 391
            +++ +TCAICL+ +E   L++ LPC+H +H  CI PWL ++S  CP+CK+
Sbjct:  203 DDDDSTCAICLELFEKKVLVKMLPCRHEFHHTCIDPWLEKQSSQCPLCKQ 252          
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|673046045|ref|XP_008876983.1| (hypothetical protein H310_11904 [Aphanomyces invadans] >gi|574467196|gb|ETV94220.1| hypothetical protein H310_11904 [Aphanomyces invadans])

HSP 1 Score: 93.9745 bits (232), Expect = 2.594e-17
Identity = 78/224 (34.82%), Postives = 104/224 (46.43%), Query Frame = 0
Query:    9 PAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAAR---ERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGH-VRAKTKQIGPIETLATYVV-VSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRK 227
            PA FG N+         RE+V VEP DAC+         Q+               L G+IALI R  CNF  KVW+AQ+A A  V+V D   R   E W   M G +++ S + IPSVFVSH TG    NA+ +S              V VT+N TGH    + +    +E +  Y +  S + L  SG C  + +   + YQR  R RA + L V  Y+ K
Sbjct:   38 PALFGANVSN-HVDFVRREIVKVEPFDACT------GDIQND--------------LSGKIALILRGECNFAWKVWQAQKANAIAVVVMDVQPRTPHELWEVQMVG-DKYASDVHIPSVFVSHETG----NAILESLEDQV---------VLVTMNATGHRTSLQRRHHTVLEGVVLYALSTSAMFLVLSGVC-FVFSNAASWYQRTERTRAAKRLPVMAYETK 225          

HSP 2 Score: 63.929 bits (154), Expect = 2.253e-7
Identity = 23/50 (46.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:  342 EEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKR 391
            +++ +TCAICL+ +E   L++ LPC+H +H  CI PWL ++S  CP+CK+
Sbjct:  227 DDDDSTCAICLELFEKKVLVKMLPCRHEFHHTCIDPWLEKQSSQCPLCKQ 276          
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|672822516|gb|KFH67410.1| (hypothetical protein MVEG_06143 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 95.1301 bits (235), Expect = 6.025e-17
Identity = 103/379 (27.18%), Postives = 158/379 (41.69%), Query Frame = 0
Query:   58 SSLSAPSLRG--RIALIKRNG------CNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRA-----LRG--------LKVEKYQRKKVSQQPLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRL---ESVPASGLGKARGGRSPCPLTGDGEAPTACEGVGASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCFSTVPRPGGSERRGRQETA 412
            ++L  P+L G  +IALI+R G      C F +K+  AQ   A   ++Y+           + + E  S + IP + + + +G++LR  + Q    SS    E A R+R+ L          +++  I      VVV L+ +SF+      +++ + C   A R R       RG        + + K    K +             SS S++P      A P S+ D  K L  L  L S      +  S+    + A PR     S+  S  G++ G   P  L  D E                       CA+CLDE+E+G+ +R LPC H +H +CI PWL  KS  CP+CK  C   +P P      G Q++A
Sbjct:   77 TTLPTPNLFGFSKIALIRRGGPTESEVCTFRQKLIIAQSDGAIAALIYNKPGATSLDGATAALSEADSPVGIPGLMIGYDSGINLRTLLQQMNTSSSP---ENANRMRIGL-------WPDQRMPVIWEFVLIVVVVLLGVSFT------VSVVLHCRLYALRQRVRMDALARGTDIPTEGTIHMRKLTLDKAALDDFPVRIFHQGSSSGSSAP-----MAKPNSV-DETKALPPLAQLTSDTTEATEGTSKSEKDVKAPPRRSRPNSIHCSIKGESDGVIYPASLDMDIEL------------------TNDMCAVCLDEFEEGEEIRMLPCHHEFHCECIDPWLTRKSPTCPLCKHNC---LPPP---SEEGNQDSA 409          
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|669152118|ref|XP_008611621.1| (hypothetical protein SDRG_07561 [Saprolegnia diclina VS20] >gi|530736507|gb|EQC34749.1| hypothetical protein SDRG_07561 [Saprolegnia diclina VS20])

HSP 1 Score: 88.1965 bits (217), Expect = 2.450e-15
Identity = 74/245 (30.20%), Postives = 104/245 (42.45%), Query Frame = 0
Query:    9 PAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAAR---ERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSP 250
            PA FG NI      L   E+V   P DAC D+     +                    GRI L+ R  CNF  K  +AQ+A A+ ++V D   +   E WG  M   +   S I IPSVFV++ TG +L   +AQ ++ ++ P         VTLN TG   A  +Q    E +  YV+ + V+         +L+  V  YQ+  R RA R L + +Y  K       +   S D G      P
Sbjct:   50 PAHFGRNISDDIPELLHGEIVSARPFDACGDVIENDVA--------------------GRIVLVVRGKCNFAYKALQAQKANASAIVVMDDKPKVHDEVWGVHMIS-DGNASDIVIPSVFVAYQTGAAL---LAQLQQDANLPPL-------VTLNSTGQGVATFRQHSIFEGIVLYVLSTSVMFVLLSALCFVLSKIVAWYQQTARTRAARRLPLRQYHVKADEDVCSICLESFDDGVWLKVLP 263          

HSP 2 Score: 63.929 bits (154), Expect = 2.731e-7
Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 0
Query:  339 WSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKR 391
            +  + ++  C+ICL+ ++DG  L+ LPC H +H  CI PWL  ++  CP+CKR
Sbjct:  237 YHVKADEDVCSICLESFDDGVWLKVLPCDHEFHQGCIDPWLQHRNGNCPLCKR 289          
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|595442964|gb|EXX54707.1| (hypothetical protein RirG_232040 [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 89.3521 bits (220), Expect = 5.489e-15
Identity = 47/127 (37.01%), Postives = 68/127 (53.54%), Query Frame = 0
Query:  277 SLRRVINKQ---RSRIPLPLPAHPRLESVPAS-----GLGKARGGRSPCPLTGDGEAPTACEGVGASKDSW-SEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCF 394
            S+  ++N++   ++  P  L  H  ++S  A+      +  AR  +S         A   CEG G + D + S+    T CAICLDE+E+GD LR LPC H +H +CI PWL +KS  CP+CK  C 
Sbjct:  384 SISSILNRKVSIKADYPTALSRHVSVKSQRAALSRHVSVRSARSTKSTRSENAISAATALCEGSGVNVDDYDSQIHYNTMCAICLDEFENGDQLRALPCGHEFHSECIDPWLTQKSSLCPLCKFDCI 510          
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|813135384|ref|XP_012198472.1| (hypothetical protein SPRG_04675 [Saprolegnia parasitica CBS 223.65] >gi|641536903|gb|KDO30774.1| hypothetical protein SPRG_04675 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 86.2705 bits (212), Expect = 9.845e-15
Identity = 74/246 (30.08%), Postives = 104/246 (42.28%), Query Frame = 0
Query:    8 KPAAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAAR---ERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSP 250
            +PA FG NI      L   E+V   P DAC D      +                    GRI L+ R  CNF  K  +AQ+A A+ ++V D   +   E WG  M   +   S I IPSVFV++ TG +L   +AQ ++  S P         VTLN TG   A  +Q    E +  YV+ + V+         +L+  V  YQ++ R RA R L + +Y  K       +   + D G      P
Sbjct:   21 RPAHFGRNISDDIPELLRGEIVSARPFDACGDAIENDVA--------------------GRIVLVVRGKCNFAYKALQAQKANASAIVVMDDKPKVHDEVWGVHMIS-DGNVSAIVIPSVFVAYQTGEAL---LAQLKQADSLPPL-------VTLNSTGQGVATFRQHSIFEGIVLYVLSTSVMFVLLSALCFVLSKIVAWYQQSARTRAARRLPMRQYHVKSDEDVCSICLETFDDGVWLKVLP 235          

HSP 2 Score: 65.0846 bits (157), Expect = 8.027e-8
Identity = 22/50 (44.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:  342 EEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKR 391
            + ++  C+ICL+ ++DG  L+ LPC H +H +CI PWL  ++  CP+CKR
Sbjct:  212 KSDEDVCSICLETFDDGVWLKVLPCDHEFHQECIDPWLQHRNGNCPLCKR 261          
BLAST of EWM23657.1 vs. NCBI_GenBank
Match: gi|821098907|ref|XP_012379371.1| (PREDICTED: E3 ubiquitin-protein ligase RNF167 isoform X4 [Dasypus novemcinctus])

HSP 1 Score: 82.4185 bits (202), Expect = 6.798e-14
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0
Query:  339 WSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRP 392
            W+  ++   CAICLDEYEDGD LR LPC H YH +C+ PWL +  + CP+CK+P
Sbjct:  124 WNSGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQP 177          
The following BLAST results are available for this feature:
BLAST of EWM23657.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104810|gb|EWM23657.1|0.000e+0100.00protease-associated RING/U-box zinc finger-contain... [more]
gi|299116310|emb|CBN76116.1|8.716e-4935.23conserved unknown protein [Ectocarpus siliculosus][more]
gi|1183490751|gb|ORZ14439.1|4.397e-2028.11hypothetical protein BCR41DRAFT_354880 [Lobosporan... [more]
gi|673046043|ref|XP_008876982.1|1.027e-1734.82hypothetical protein, variant [Aphanomyces invadan... [more]
gi|673046045|ref|XP_008876983.1|2.594e-1734.82hypothetical protein H310_11904 [Aphanomyces invad... [more]
gi|672822516|gb|KFH67410.1|6.025e-1727.18hypothetical protein MVEG_06143 [Mortierella verti... [more]
gi|669152118|ref|XP_008611621.1|2.450e-1530.20hypothetical protein SDRG_07561 [Saprolegnia dicli... [more]
gi|595442964|gb|EXX54707.1|5.489e-1537.01hypothetical protein RirG_232040 [Rhizophagus irre... [more]
gi|813135384|ref|XP_012198472.1|9.845e-1530.08hypothetical protein SPRG_04675 [Saprolegnia paras... [more]
gi|821098907|ref|XP_012379371.1|6.798e-1455.56PREDICTED: E3 ubiquitin-protein ligase RNF167 isof... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7039rna7039Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications