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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100030g29.4178.mrna |
| Orig protein id | gnl|cribi|Naga_100030g29.4178 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:227679..228708 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7008 ID=rna7008|Name=rna7008|organism=Nannochloropsis gaditana|type=mRNA|length=2210bp
AAAGGATTTGCCGGTCCGCCAAAATGCCTGTTTCCGCGCAACAACAATGA
ACAAACCTCTTCTGTGGAGCTACATGGGTTAGGGTCAGGGCAATTTTCTC
ACGTGAAAGATACAAAATGACACAGGGTCCAGCCAGTTTTGTAGTGCGAT
TTTCCGCCCCGCGCTTTTTCACCATACATCACACACTTGTTCCGGAAAAC
GCCCCCTTCGACGCATGCAAATCTCTGCCGTTGTTGACTATGACGTTGAA
GCTGTCAAGGCACAGGTAGACACCATTTTGGCGTCACAAGGGGTGGAGGA
TGCACGCAAACATTTCGAAGAAACGCTTTCCTCTTGGGCTGACGAGTACT
CCCGTATATTAGAGGAAGCCAGCCAACCTCTTTCCGTTGCGGATAGACAA
CCCTATGAAGAAAGTCTAGTTGACCTTTGGCTTGCATACGCTGCCTTCGA
AAGGCGACTGCGCCAATGGAAACAAGCGGTAAAGGTGTTTGAAAGCGCCA
CAACGGACGTTATCGGAGAGAAGACATCCCGGCTGTGGGTTGAATATGGG
CGCTTCTGTCGGGAGCGTGGTAAATTTGCCAACGCGCAAAAAGTGTACCT
GCGGGCGGTGGAAGTCCTAGATACCAAGGCCGAGCGAGACATGATCTGGT
CTGAATTCCTAGAGGCACTCAAGGCCAAGGGCGGGCCTGGAACAGATGGC
ATTGAGACGGTGGCCCAGCTCAAAGCTATGCTTGGCATCCCTGAAGAGGA
AGAGCAAAAACACGAGATAAAAGGGGTTGATGAAGTCTCTGCAGAATCAG
GGCCGGGAGATCCGAGCAGCGATGCTTCATCAGATCCTGTCTCTGGATCG
ATAATCAGGGGGATGGAGAAGCCAGCATCGGGGAACAATTTACCAGACAA
CGCCGTTAATGATGCACCAGTCTTCTCGGAGCCTTCAGTTCTTGAGTCGT
CACCAGATGGAAAAAGAGAAACGCTCACATTGGGCTCTCAGATGCAAATG
GTCCCTGCGCAGTCTACAGCACCCGAGCTCGTAGATGCCTCAGCTGCCAA
AATAGCACCAGCGCAACCTGCAGAAACGGAGCCACCACCCCTGTTGTTTT
CCACCGAGGCACTGCTTAATATGGATGACGCGTACGGTGCAGGTTTGGAG
GAGGAAACTCTTGGGGCCGTGAAGGTTCTTTTGGGGGACCCGGCCGTGCT
GGACGTGGTCGAGGGGCAATGGCTGGTGCAGGCCATGAAGCAGCAGCTGG
CAAGCACTATTTTGGCGGGGCTGGAGGCCAAGCATACCGAGGCAAGAGAA
CGCCTGGCCCTTCGTCATGCGCAGCTGCAGGCAAGTATTCCCAGTGTTTC
TCTATCGTCTCAACTGGAGCAGGAGCGACAGGCATTGGCGACGGCATGCG
AACGAGAACGAGCACAACTCAGAACACAGCTCTCGGCCGAGTTCTGGCAA
GTGCTTGAGGCCCAGCAATCCATCCTAGGGGAGGGTGCTGGGGGCGCGGG
GCTGCCAGGGTTGGAGATAACGCGTGACCGAACAGCTATAGCAAAGCAGC
AAAAAGTTCTCCGCGTGGTCACGGCCAACATGCAGCTCTACCACTTCCAT
AGGAAGCGGCAACGCATGACAGAAGACCTGGCGCACCAAACTGACCTTTT
GCATGAGCTGCAATGCGCTGCAAGCGGTGTAGAAAGTGAGAGCGGTAAAT
CCACAGCCACCAGAGCAGAGACGTCTAAACCTTCATCCTCGTCGGCGCCT
GATGCCCCGTCGCCGGATTCCCTACCTTCCGGCGAGCGTAGCAATGGAAG
CAGCCGCAGCAAGAGGGGCACGTCCTCGGGCACAAGGTGGGAACCCGTGG
CCTCAGTGGAAAAAACGGTGGAGGAGGGGAAAGGCGGGCAAAGTGAGGGC
GGCAGACCCCGGAAGCAGATGAGGGCGCGAGGAGACCGAGGGCATTCACC
GCACGTTGAGTCGGCCAACGTTGGACGATCGCCGCCGCGGCGAAGCAGTC
GTAGAGGGGGGCATGGCAGCGCTTATAGGGATGGCGCTGAGAGTAAGGAG
AAAGCCACGTCAGCTCCGAGTGCCGACAATAGAGCCATCCTTCGTAGAAT
GATGGAACATTTCAAGTAATTGACGAAGCAAATTTATAAAGCAGACACCT
CATAGTTTACACTTCGGCGGTGATTTTCCTTGCCCCATCGAACGTTACGT
GATTTATCGA back to topprotein sequence of rna7008 >rna7008-protein ID=rna7008-protein|Name=rna7008|organism=Nannochloropsis gaditana|type=polypeptide|length=253bp
MSASSRGYLAAFLSPRTLLFCIFQCFTLVYGCLPPGGVNSGVTQAQGTYV
CIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYG
PNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDN
GCPLCDNSDRCVENTYDFTGERYTGVGATSDCFLTDAECALNAQADRNAC
QLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGLVKGVQGVSMR
EEK back to topmRNA from alignment at CM002470.1:227679..228708+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7008 ID=rna7008|Name=rna7008|organism=Nannochloropsis gaditana|type=mRNA|length=1030bp|location=Sequence derived from alignment at CM002470.1:227679..228708+ (Nannochloropsis gaditana)
CTCAGGTACCCATGTCCGCATCATCAAGAGGGTATTTGGCCGCTTTCCTA
TCCCCAAGAACGTTATTGTTCTGCATTTTTCAGTGCTTCACATTGGTCTA
TGGCTGCCTGCCGCCGGGTGGAGTGAATTCGGGTGTGACCCAGGCCCAAG
GGACTTACGTCTGCATTGTGTTCTCGGCGCCCGCTTGGCAAGAGGGGACA
AGCAATTTTTCGCGCGTAGCATTTACTCCAACCGTGGATAGATTTACACG
TCTCCAATTCTCCGATACTTTCTCCAATCTTACCTCTCAAGGCGTCGCAA
ATTTGTATGGGCCAAACGTAGCGGTGCATGTTGAGAGCATGGGCGTCGCC
TCGTTTCAGAAACTCTACCGGCAGGAAGACAGTCTAGGACGGACATTCTC
TGTTCTCACCGCAATCATAAACCTGGATAGAGGAGTGGTGACTGGCATCA
CTTTTGATAATGGTTGTCCCCTTTGCGACAATAGCGATAGGTGTGTAGAG
AATACGTACGACTTCACGGGCGAGCGCTACACGGGTGTTGGCGCTACGTC
GGACTGTTTTTTGACGGACGCCGAATGCGCCCTTAACGCTCAGGCAGATC
GAAATGCCTGCCAATTGAGCTTGTACATAACGTGGACCGGCACGGACGCG
CAGGGTAATTTTTTGACGAGCTCCAGTcgccgcttttccctcctcagcgC
TTTCTCAGTCAAATCGTTCGTGAACGGGCTGGTCAAGGGCGTGCAGGGCG
TATCGATGCGCGAAGAGAAATGAGTTAAAAAGAAGACATGGAGCTTCTCG
CTCTAAGAGCAGTCTTTTCCCAAGAAGAGGCGACCATCAGGATTTTACAT
CAATGCACGGCGTCCCGTTACTGTTTTCGGAAAACAATATTCAATGCAAT
GCCACACACCTCAGTCTTCCGGTGTGCTTTGATATTTCTTCTCATATACA
CTGACATGCATACCACACACCGGTGTGGATTTAATTTATATGCTGCTCCC
GCTACCTCTCCCCTGGctctgcttctttct back to topCoding sequence (CDS) from alignment at CM002470.1:227679..228708+ >rna7008 ID=rna7008|Name=rna7008|organism=Nannochloropsis gaditana|type=CDS|length=762bp|location=Sequence derived from alignment at CM002470.1:227679..228708+ (Nannochloropsis gaditana)
ATGTCCGCATCATCAAGAGGGTATTTGGCCGCTTTCCTATCCCCAAGAAC
GTTATTGTTCTGCATTTTTCAGTGCTTCACATTGGTCTATGGCTGCCTGC
CGCCGGGTGGAGTGAATTCGGGTGTGACCCAGGCCCAAGGGACTTACGTC
TGCATTGTGTTCTCGGCGCCCGCTTGGCAAGAGGGGACAAGCAATTTTTC
GCGCGTAGCATTTACTCCAACCGTGGATAGATTTACACGTCTCCAATTCT
CCGATACTTTCTCCAATCTTACCTCTCAAGGCGTCGCAAATTTGTATGGG
CCAAACGTAGCGGTGCATGTTGAGAGCATGGGCGTCGCCTCGTTTCAGAA
ACTCTACCGGCAGGAAGACAGTCTAGGACGGACATTCTCTGTTCTCACCG
CAATCATAAACCTGGATAGAGGAGTGGTGACTGGCATCACTTTTGATAAT
GGTTGTCCCCTTTGCGACAATAGCGATAGGTGTGTAGAGAATACGTACGA
CTTCACGGGCGAGCGCTACACGGGTGTTGGCGCTACGTCGGACTGTTTTT
TGACGGACGCCGAATGCGCCCTTAACGCTCAGGCAGATCGAAATGCCTGC
CAATTGAGCTTGTACATAACGTGGACCGGCACGGACGCGCAGGGTAATTT
TTTGACGAGCTCCAGTcgccgcttttccctcctcagcgCTTTCTCAGTCA
AATCGTTCGTGAACGGGCTGGTCAAGGGCGTGCAGGGCGTATCGATGCGC
GAAGAGAAATGA back to top
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