EWM23681.1, cds6991 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|585104835|gb|EWM23681.1| (hypothetical protein Naga_100030g29 [Nannochloropsis gaditana]) HSP 1 Score: 517.309 bits (1331), Expect = 0.000e+0 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
Query: 1 MSASSRGYLAAFLSPRTLLFCIFQCFTLVYGCLPPGGVNSGVTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGLVKGVQGVSMREEK 253
MSASSRGYLAAFLSPRTLLFCIFQCFTLVYGCLPPGGVNSGVTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGLVKGVQGVSMREEK
Sbjct: 1 MSASSRGYLAAFLSPRTLLFCIFQCFTLVYGCLPPGGVNSGVTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGLVKGVQGVSMREEK 253
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|298706319|emb|CBJ29334.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 142.51 bits (358), Expect = 8.306e-38 Identity = 75/204 (36.76%), Postives = 121/204 (59.31%), Query Frame = 0
Query: 42 VTQAQGTYVCIVFSAPAWQ--EGTSNFSRVAFTPTVDRFTRLQFSDTFSN---LTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGATSDCFLTDAECALNAQADRNA--CQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVN 238
VT + T VC+V + W+ + +S+V P D F+R +++ + + +G V VHVESMG SFQK +R + +TF + TAII++D G VTGI++D+GC C S +C +NTYD+TG+ G G DC+ D++C + D+ + CQL++Y+ WTGTD++GNF TS ++R S+ + +V+ ++
Sbjct: 49 VTIGEETSVCLVVNGLGWEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREEE-KTFPLHTAIISVDEGEVTGISWDDGCHFC-GSSQCEDNTYDYTGQLIGGEGNGQDCYWPDSDCLQDGVEDQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMYAGETVEGLIS 250
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|1072223682|gb|OEU08436.1| (hypothetical protein FRACYDRAFT_249707 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 122.865 bits (307), Expect = 4.791e-30 Identity = 77/212 (36.32%), Postives = 109/212 (51.42%), Query Frame = 0
Query: 31 GCLPPGGVNSGVTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNL---TSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGATSD---CFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSF 236
GC+ P VT Q T +C+V ++ + R+ F P D ++R D+F+ L + + ++ N+ VH ES SFQKLY + + F LTAII +++G VTGIT+DN C C N D C +NTY F G T A C + C +A+A+ C L LY+ WTGTD+ G TSS+ RF SAF +S+
Sbjct: 52 GCVDPVKGYEAVTIGQPTTICLVLASNGDWSTDMEYMRLNFQPIADDYSRFHVPDSFTQLIGSPKEALTKIFPGNITVHSESQTALSFQKLYY--NGADKVFPFLTAIIAVEKGNVTGITWDNACVFCAN-DECEDNTYGFNGGIATEADAQQPVGGCHSSVVACKDSAEAE---CDLMLYVVWTGTDSNGKDFTSSANRF---SAFPKQSW 254
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|667483849|gb|AIG56500.1| (secreted protein [Achlya hypogyna] >gi|1173926636|gb|OQR80816.1| hypothetical protein ACHHYP_17180 [Achlya hypogyna]) HSP 1 Score: 111.694 bits (278), Expect = 2.201e-26 Identity = 75/224 (33.48%), Postives = 114/224 (50.89%), Query Frame = 0
Query: 22 IFQCFTLVYGCLPPGGVNSGVTQAQGTYVCIVFSAPAWQ-EGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGV----GATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGL 240
I + L+ G + SG+ Q + IV P + ++ R FTPTVD + +L+ ++ +L Q V+ + + SM + KLY D GR F LTAII++ +GV+ GI++D+GC LCD S C+ N Y R V G+ + C++ C + NAC + +Y+ WTGTD GN+L+S+ R S AFSV S+V+ L
Sbjct: 3 IIKLLALLVAVTAEGAIISGLCNDQESATPIVRGDPTYVCININDKYRAVFTPTVDSYVQLRMYKSYDDLRIQNVSE----PAYLTLSSMTSRTPYKLY--TDLTGRAFPTLTAIISVAKGVIQGISWDDGCYLCD-SKSCLPNLY--AAPRIALVNSAFGSGNTCYMNRTAC----MSTDNACDIGIYVGWTGTDYNGNYLSSAGMRISQFQAFSVSSYVSDL 213
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|1210515440|dbj|GAX25681.1| (hypothetical protein FisN_15Lh050 [Fistulifera solaris]) HSP 1 Score: 110.153 bits (274), Expect = 2.501e-25 Identity = 63/184 (34.24%), Postives = 103/184 (55.98%), Query Frame = 0
Query: 48 TYVCI-VFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSL-GRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGA---TSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFS 226
T VC V + W G ++ R++F P D+++R+ ++F++L + Y +V + + + F ++Y D++ R F LTAII++ G+V G+T+D+ C C +SD+C E TYDF G + T + T C +T+ EC + A + C L++Y+ WTGTDA G SS+ RFS
Sbjct: 55 TIVCFHVGNTKDWARGV-DYIRLSFQPEADQYSRMHIPNSFNDLVVESETVFYQRDVTIAAAAQDKSGFLRVYY--DAVEARVFPYLTAIIDVKDGMVRGVTWDDSCVFC-SSDKCAEITYDFNGVQQTQATSGQPTRGCEITEDECNVLASEGKTLCDLTIYVVWTGTDANGVAFQSSASRFS 234
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|1210518119|dbj|GAX23050.1| (hypothetical protein FisN_15Hh050 [Fistulifera solaris]) HSP 1 Score: 108.997 bits (271), Expect = 5.524e-25 Identity = 65/203 (32.02%), Postives = 109/203 (53.69%), Query Frame = 0
Query: 48 TYVCI-VFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSL-GRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGA---TSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGLVKGVQ 245
T VC V + W G ++ R++F P D+++R+ ++F++L + Y +V + + + F ++Y D++ R F LTAII++ G+V G+T+D+ C C +SD+C E TYDF G + T + T C +T+ EC + A + C L++Y+ WTGTDA G SS+ RFS + V+ + V+
Sbjct: 50 TIVCFHVGNTKDWARGV-DYIRLSFQPEADQYSRMHIPNSFNDLVVESETVFYQRDVTIAAAAQDKSGFLRVYY--DAVEARVFPYLTAIIDVKDGMVRGVTWDDSCVFC-SSDKCPEITYDFNGVQQTQATSGQPTRGCEITEDECNVLASEGKTLCDLTIYVVWTGTDANGVAFQSSASRFSRFPPQELSDRVSNALPQVE 248
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|813198572|ref|XP_012208869.1| (hypothetical protein SPRG_14351 [Saprolegnia parasitica CBS 223.65] >gi|641526013|gb|KDO20413.1| hypothetical protein SPRG_14351 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 105.916 bits (263), Expect = 3.240e-24 Identity = 75/239 (31.38%), Postives = 116/239 (48.54%), Query Frame = 0
Query: 6 RGYLAAFLSPRTLLFCIFQCFTLVYGCLPPGGVNSGVTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSN--LTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERY--TGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGL 240
G LA L+ L + ++ G ++ + + TY+CI ++ R FTPTVD + +L+ +++S+ + + A+ + + SM S KLY D GR F LTAII + G++ GI++D+GC LCD + C+ N Y + G S C++ C A NAC L +Y+ WTGTD GN+L+S+ R S AFSV S+V+ L
Sbjct: 2 HGLLAVVLA----LIAVVADGAIISGLCNDKNTSTPLVKGDQTYICI---------NVNDMYRAVFTPTVDDYVQLRMYNSYSDNRIVNASAASF------LTLSSMTSRSVYKLY--ADVTGRAFPTLTAIITVANGIIQGISWDDGCYLCDAA-SCMSNLYASPKRPLLNSAFGDGSTCYMNRTTCT----ATDNACDLGIYVGWTGTDYNGNYLSSAGMRVSQFQAFSVSSYVSDL 214
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|669165182|ref|XP_008618153.1| (hypothetical protein SDRG_13833 [Saprolegnia diclina VS20] >gi|530730263|gb|EQC28505.1| hypothetical protein SDRG_13833 [Saprolegnia diclina VS20]) HSP 1 Score: 105.531 bits (262), Expect = 5.490e-24 Identity = 69/201 (34.33%), Postives = 103/201 (51.24%), Query Frame = 0
Query: 42 VTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERY--TGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGL 240
+ + TY+CI ++ R FTPTVD + +L+ +++S+ + N P+ + + S+ S KLY D GR F LTAII + G++ GI++D+GC LCD + C N Y + G S C++ C A NAC L +Y+ WTGTD GN+L+S+ R S AFSV S+V+ L
Sbjct: 34 LVKGDQTYICI---------NVNDMYRAVFTPTVDDYVQLRMYNSYSD---NRIVNASAPSF-LTLSSITTRSVYKLY--TDVTGRAFPTLTAIITVANGIIQGISWDDGCYLCDAA-SCSSNLYASPKLPLLNSAFGDGSTCYMNRTTCT----ATDNACDLGIYVGWTGTDYNGNYLSSAGMRVSQFQAFSVSSYVSDL 214
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|673044943|ref|XP_008876432.1| (hypothetical protein H310_11507 [Aphanomyces invadans] >gi|574467820|gb|ETV94841.1| hypothetical protein H310_11507 [Aphanomyces invadans]) HSP 1 Score: 96.2857 bits (238), Expect = 1.710e-20 Identity = 65/201 (32.34%), Postives = 101/201 (50.25%), Query Frame = 0
Query: 42 VTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTF--SNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDF-TGERY-TGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVN 238
V + TY+CI ++ R F P VD++ +L+ D++ S L + Y + + SM S K Y + G+ + +LTA++++ +G V GI++D+GC LCD + C N Y T Y T G S C+ AEC C LS+Y+ WTGTDA GN+L+S+ R S +SV S+++
Sbjct: 38 VVKGDQTYICI---------NINDQYRAVFAPVVDKYVQLRLHDSYIDSRLRPTNSSAAY-----MTISSMASRSVYKQYTT--ARGKAYPILTAVVSVKQGEVQGISWDDGCYLCDMAS-CDPNLYSMPTIPLYSTAFGDGSTCYKDHAECTNTT----GLCDLSVYVGWTGTDANGNYLSSAGMRISQFQKYSVNSYIS 217
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|1173960931|gb|OQS07012.1| (hypothetical protein THRCLA_20230 [Thraustotheca clavata]) HSP 1 Score: 90.8929 bits (224), Expect = 1.360e-18 Identity = 68/221 (30.77%), Postives = 106/221 (47.96%), Query Frame = 0
Query: 29 VYGCLPPGGVNSGVT-----QAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTF--SNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERY--TGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGL 240
V+G + G N T + TYVCI ++ R FTP VD F +L+ +++ S + + A+ + + SM S KLY D G+ F TA+I + G++ GI++D+GC LC NS C N Y + G+ + CF C+ + N+C L +++ WTGTD GN+L+S+ R S +SV S+V+ L
Sbjct: 13 VHGAIISGLCNDKNTSTPLVKGDQTYVCI---------NINDKYRAVFTPVVDDFVQLRVYNSYKDSRIENSSFASY------LTLSSMTSRSVYKLY--TDQTGKAFPSFTAVITVVDGLIQGISWDDGCYLC-NSTSCASNIYSAPKVPLVNSAFGSGNTCFHNQTACS----STENSCDLGIFVGWTGTDYNGNYLSSAGMRVSQFQQYSVTSYVDDL 211 The following BLAST results are available for this feature:
BLAST of EWM23681.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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