EWM23681.1, cds6991 (CDS) Nannochloropsis gaditana

Overview
NameEWM23681.1
Unique Namecds6991
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:227690..228451 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23681.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100030g29.4178.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:227690..228451 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|585104835|gb|EWM23681.1| (hypothetical protein Naga_100030g29 [Nannochloropsis gaditana])

HSP 1 Score: 517.309 bits (1331), Expect = 0.000e+0
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
Query:    1 MSASSRGYLAAFLSPRTLLFCIFQCFTLVYGCLPPGGVNSGVTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGLVKGVQGVSMREEK 253
            MSASSRGYLAAFLSPRTLLFCIFQCFTLVYGCLPPGGVNSGVTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGLVKGVQGVSMREEK
Sbjct:    1 MSASSRGYLAAFLSPRTLLFCIFQCFTLVYGCLPPGGVNSGVTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGLVKGVQGVSMREEK 253          
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|298706319|emb|CBJ29334.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 142.51 bits (358), Expect = 8.306e-38
Identity = 75/204 (36.76%), Postives = 121/204 (59.31%), Query Frame = 0
Query:   42 VTQAQGTYVCIVFSAPAWQ--EGTSNFSRVAFTPTVDRFTRLQFSDTFSN---LTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGATSDCFLTDAECALNAQADRNA--CQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVN 238
            VT  + T VC+V +   W+     + +S+V   P  D F+R     +++    +    +   +G  V VHVESMG  SFQK +R  +   +TF + TAII++D G VTGI++D+GC  C  S +C +NTYD+TG+   G G   DC+  D++C  +   D+ +  CQL++Y+ WTGTD++GNF TS ++R S+ +  +V+  ++
Sbjct:   49 VTIGEETSVCLVVNGLGWEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREEE-KTFPLHTAIISVDEGEVTGISWDDGCHFC-GSSQCEDNTYDYTGQLIGGEGNGQDCYWPDSDCLQDGVEDQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMYAGETVEGLIS 250          
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|1072223682|gb|OEU08436.1| (hypothetical protein FRACYDRAFT_249707 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 122.865 bits (307), Expect = 4.791e-30
Identity = 77/212 (36.32%), Postives = 109/212 (51.42%), Query Frame = 0
Query:   31 GCLPPGGVNSGVTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNL---TSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGATSD---CFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSF 236
            GC+ P      VT  Q T +C+V ++         + R+ F P  D ++R    D+F+ L     + +  ++  N+ VH ES    SFQKLY   +   + F  LTAII +++G VTGIT+DN C  C N D C +NTY F G   T   A      C  +   C  +A+A+   C L LY+ WTGTD+ G   TSS+ RF   SAF  +S+
Sbjct:   52 GCVDPVKGYEAVTIGQPTTICLVLASNGDWSTDMEYMRLNFQPIADDYSRFHVPDSFTQLIGSPKEALTKIFPGNITVHSESQTALSFQKLYY--NGADKVFPFLTAIIAVEKGNVTGITWDNACVFCAN-DECEDNTYGFNGGIATEADAQQPVGGCHSSVVACKDSAEAE---CDLMLYVVWTGTDSNGKDFTSSANRF---SAFPKQSW 254          
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|667483849|gb|AIG56500.1| (secreted protein [Achlya hypogyna] >gi|1173926636|gb|OQR80816.1| hypothetical protein ACHHYP_17180 [Achlya hypogyna])

HSP 1 Score: 111.694 bits (278), Expect = 2.201e-26
Identity = 75/224 (33.48%), Postives = 114/224 (50.89%), Query Frame = 0
Query:   22 IFQCFTLVYGCLPPGGVNSGVTQAQGTYVCIVFSAPAWQ-EGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGV----GATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGL 240
            I +   L+      G + SG+   Q +   IV   P +     ++  R  FTPTVD + +L+   ++ +L  Q V+        + + SM   +  KLY   D  GR F  LTAII++ +GV+ GI++D+GC LCD S  C+ N Y     R   V    G+ + C++    C     +  NAC + +Y+ WTGTD  GN+L+S+  R S   AFSV S+V+ L
Sbjct:    3 IIKLLALLVAVTAEGAIISGLCNDQESATPIVRGDPTYVCININDKYRAVFTPTVDSYVQLRMYKSYDDLRIQNVSE----PAYLTLSSMTSRTPYKLY--TDLTGRAFPTLTAIISVAKGVIQGISWDDGCYLCD-SKSCLPNLY--AAPRIALVNSAFGSGNTCYMNRTAC----MSTDNACDIGIYVGWTGTDYNGNYLSSAGMRISQFQAFSVSSYVSDL 213          
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|1210515440|dbj|GAX25681.1| (hypothetical protein FisN_15Lh050 [Fistulifera solaris])

HSP 1 Score: 110.153 bits (274), Expect = 2.501e-25
Identity = 63/184 (34.24%), Postives = 103/184 (55.98%), Query Frame = 0
Query:   48 TYVCI-VFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSL-GRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGA---TSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFS 226
            T VC  V +   W  G  ++ R++F P  D+++R+   ++F++L  +     Y  +V +   +   + F ++Y   D++  R F  LTAII++  G+V G+T+D+ C  C +SD+C E TYDF G + T   +   T  C +T+ EC + A   +  C L++Y+ WTGTDA G    SS+ RFS
Sbjct:   55 TIVCFHVGNTKDWARGV-DYIRLSFQPEADQYSRMHIPNSFNDLVVESETVFYQRDVTIAAAAQDKSGFLRVYY--DAVEARVFPYLTAIIDVKDGMVRGVTWDDSCVFC-SSDKCAEITYDFNGVQQTQATSGQPTRGCEITEDECNVLASEGKTLCDLTIYVVWTGTDANGVAFQSSASRFS 234          
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|1210518119|dbj|GAX23050.1| (hypothetical protein FisN_15Hh050 [Fistulifera solaris])

HSP 1 Score: 108.997 bits (271), Expect = 5.524e-25
Identity = 65/203 (32.02%), Postives = 109/203 (53.69%), Query Frame = 0
Query:   48 TYVCI-VFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSL-GRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGA---TSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGLVKGVQ 245
            T VC  V +   W  G  ++ R++F P  D+++R+   ++F++L  +     Y  +V +   +   + F ++Y   D++  R F  LTAII++  G+V G+T+D+ C  C +SD+C E TYDF G + T   +   T  C +T+ EC + A   +  C L++Y+ WTGTDA G    SS+ RFS      +   V+  +  V+
Sbjct:   50 TIVCFHVGNTKDWARGV-DYIRLSFQPEADQYSRMHIPNSFNDLVVESETVFYQRDVTIAAAAQDKSGFLRVYY--DAVEARVFPYLTAIIDVKDGMVRGVTWDDSCVFC-SSDKCPEITYDFNGVQQTQATSGQPTRGCEITEDECNVLASEGKTLCDLTIYVVWTGTDANGVAFQSSASRFSRFPPQELSDRVSNALPQVE 248          
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|813198572|ref|XP_012208869.1| (hypothetical protein SPRG_14351 [Saprolegnia parasitica CBS 223.65] >gi|641526013|gb|KDO20413.1| hypothetical protein SPRG_14351 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 105.916 bits (263), Expect = 3.240e-24
Identity = 75/239 (31.38%), Postives = 116/239 (48.54%), Query Frame = 0
Query:    6 RGYLAAFLSPRTLLFCIFQCFTLVYGCLPPGGVNSGVTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSN--LTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERY--TGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGL 240
             G LA  L+    L  +     ++ G       ++ + +   TY+CI           ++  R  FTPTVD + +L+  +++S+  + +   A+       + + SM   S  KLY   D  GR F  LTAII +  G++ GI++D+GC LCD +  C+ N Y         +  G  S C++    C     A  NAC L +Y+ WTGTD  GN+L+S+  R S   AFSV S+V+ L
Sbjct:    2 HGLLAVVLA----LIAVVADGAIISGLCNDKNTSTPLVKGDQTYICI---------NVNDMYRAVFTPTVDDYVQLRMYNSYSDNRIVNASAASF------LTLSSMTSRSVYKLY--ADVTGRAFPTLTAIITVANGIIQGISWDDGCYLCDAA-SCMSNLYASPKRPLLNSAFGDGSTCYMNRTTCT----ATDNACDLGIYVGWTGTDYNGNYLSSAGMRVSQFQAFSVSSYVSDL 214          
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|669165182|ref|XP_008618153.1| (hypothetical protein SDRG_13833 [Saprolegnia diclina VS20] >gi|530730263|gb|EQC28505.1| hypothetical protein SDRG_13833 [Saprolegnia diclina VS20])

HSP 1 Score: 105.531 bits (262), Expect = 5.490e-24
Identity = 69/201 (34.33%), Postives = 103/201 (51.24%), Query Frame = 0
Query:   42 VTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERY--TGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGL 240
            + +   TY+CI           ++  R  FTPTVD + +L+  +++S+     + N   P+  + + S+   S  KLY   D  GR F  LTAII +  G++ GI++D+GC LCD +  C  N Y         +  G  S C++    C     A  NAC L +Y+ WTGTD  GN+L+S+  R S   AFSV S+V+ L
Sbjct:   34 LVKGDQTYICI---------NVNDMYRAVFTPTVDDYVQLRMYNSYSD---NRIVNASAPSF-LTLSSITTRSVYKLY--TDVTGRAFPTLTAIITVANGIIQGISWDDGCYLCDAA-SCSSNLYASPKLPLLNSAFGDGSTCYMNRTTCT----ATDNACDLGIYVGWTGTDYNGNYLSSAGMRVSQFQAFSVSSYVSDL 214          
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|673044943|ref|XP_008876432.1| (hypothetical protein H310_11507 [Aphanomyces invadans] >gi|574467820|gb|ETV94841.1| hypothetical protein H310_11507 [Aphanomyces invadans])

HSP 1 Score: 96.2857 bits (238), Expect = 1.710e-20
Identity = 65/201 (32.34%), Postives = 101/201 (50.25%), Query Frame = 0
Query:   42 VTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTF--SNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDF-TGERY-TGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVN 238
            V +   TY+CI           ++  R  F P VD++ +L+  D++  S L     +  Y     + + SM   S  K Y    + G+ + +LTA++++ +G V GI++D+GC LCD +  C  N Y   T   Y T  G  S C+   AEC          C LS+Y+ WTGTDA GN+L+S+  R S    +SV S+++
Sbjct:   38 VVKGDQTYICI---------NINDQYRAVFAPVVDKYVQLRLHDSYIDSRLRPTNSSAAY-----MTISSMASRSVYKQYTT--ARGKAYPILTAVVSVKQGEVQGISWDDGCYLCDMAS-CDPNLYSMPTIPLYSTAFGDGSTCYKDHAECTNTT----GLCDLSVYVGWTGTDANGNYLSSAGMRISQFQKYSVNSYIS 217          
BLAST of EWM23681.1 vs. NCBI_GenBank
Match: gi|1173960931|gb|OQS07012.1| (hypothetical protein THRCLA_20230 [Thraustotheca clavata])

HSP 1 Score: 90.8929 bits (224), Expect = 1.360e-18
Identity = 68/221 (30.77%), Postives = 106/221 (47.96%), Query Frame = 0
Query:   29 VYGCLPPGGVNSGVT-----QAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTF--SNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERY--TGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGL 240
            V+G +  G  N   T     +   TYVCI           ++  R  FTP VD F +L+  +++  S + +   A+       + + SM   S  KLY   D  G+ F   TA+I +  G++ GI++D+GC LC NS  C  N Y         +  G+ + CF     C+    +  N+C L +++ WTGTD  GN+L+S+  R S    +SV S+V+ L
Sbjct:   13 VHGAIISGLCNDKNTSTPLVKGDQTYVCI---------NINDKYRAVFTPVVDDFVQLRVYNSYKDSRIENSSFASY------LTLSSMTSRSVYKLY--TDQTGKAFPSFTAVITVVDGLIQGISWDDGCYLC-NSTSCASNIYSAPKVPLVNSAFGSGNTCFHNQTACS----STENSCDLGIFVGWTGTDYNGNYLSSAGMRVSQFQQYSVTSYVDDL 211          
The following BLAST results are available for this feature:
BLAST of EWM23681.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104835|gb|EWM23681.1|0.000e+0100.00hypothetical protein Naga_100030g29 [Nannochlorops... [more]
gi|298706319|emb|CBJ29334.1|8.306e-3836.76conserved unknown protein [Ectocarpus siliculosus][more]
gi|1072223682|gb|OEU08436.1|4.791e-3036.32hypothetical protein FRACYDRAFT_249707 [Fragilario... [more]
gi|667483849|gb|AIG56500.1|2.201e-2633.48secreted protein [Achlya hypogyna] >gi|1173926636|... [more]
gi|1210515440|dbj|GAX25681.1|2.501e-2534.24hypothetical protein FisN_15Lh050 [Fistulifera sol... [more]
gi|1210518119|dbj|GAX23050.1|5.524e-2532.02hypothetical protein FisN_15Hh050 [Fistulifera sol... [more]
gi|813198572|ref|XP_012208869.1|3.240e-2431.38hypothetical protein SPRG_14351 [Saprolegnia paras... [more]
gi|669165182|ref|XP_008618153.1|5.490e-2434.33hypothetical protein SDRG_13833 [Saprolegnia dicli... [more]
gi|673044943|ref|XP_008876432.1|1.710e-2032.34hypothetical protein H310_11507 [Aphanomyces invad... [more]
gi|1173960931|gb|OQS07012.1|1.360e-1830.77hypothetical protein THRCLA_20230 [Thraustotheca c... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7008rna7008Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications