EWM23741.1, cds6932 (CDS) Nannochloropsis gaditana

Overview
NameEWM23741.1
Unique Namecds6932
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:83030..83782 +

Link to JBrowse

Properties
Property NameValue
Start range83030
Start range.
Protein idEWM23741.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102563g1.4246.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:83030..83782 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23741.1 vs. NCBI_GenBank
Match: gi|585104924|gb|EWM23741.1| (hypothetical protein Naga_102563g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 463.766 bits (1192), Expect = 1.658e-164
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0 
Query:    1 PPPPLLPPPPPAPLLLPQHFLPSPPLPPSFPPSPPLTTSPPAPPSSSPKSLPTTCLSRGNATSPLPPPPLPSLDHLSPGTSLLLTQVPPHHLSIAWEQENATSPRPSLPSSRPIAAIPPPPALASGPEGARTPEGVTVGEDVTAEREVWIGRKEEPTSEALRAPLPPSLPLSLPPSVPVDQSSYADRFTGLIGAEGILEEVETRQEGGGERGREGGREGGRGVALFCREGEVDGGLGGLGERVCGAVGSL 250
            PPPPLLPPPPPAPLLLPQHFLPSPPLPPSFPPSPPLTTSPPAPPSSSPKSLPTTCLSRGNATSPLPPPPLPSLDHLSPGTSLLLTQVPPHHLSIAWEQENATSPRPSLPSSRPIAAIPPPPALASGPEGARTPEGVTVGEDVTAEREVWIGRKEEPTSEALRAPLPPSLPLSLPPSVPVDQSSYADRFTGLIGAEGILEEVETRQEGGGERGREGGREGGRGVALFCREGEVDGGLGGLGERVCGAVGSL
Sbjct:    1 PPPPLLPPPPPAPLLLPQHFLPSPPLPPSFPPSPPLTTSPPAPPSSSPKSLPTTCLSRGNATSPLPPPPLPSLDHLSPGTSLLLTQVPPHHLSIAWEQENATSPRPSLPSSRPIAAIPPPPALASGPEGARTPEGVTVGEDVTAEREVWIGRKEEPTSEALRAPLPPSLPLSLPPSVPVDQSSYADRFTGLIGAEGILEEVETRQEGGGERGREGGREGGRGVALFCREGEVDGGLGGLGERVCGAVGSL 250
The following BLAST results are available for this feature:
BLAST of EWM23741.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104924|gb|EWM23741.1|1.658e-164100.00hypothetical protein Naga_102563g1, partial [Nanno... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6948rna6948Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications