EWM23742.1, cds6931 (CDS) Nannochloropsis gaditana

Overview
NameEWM23742.1
Unique Namecds6931
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:81197..81206 +
Alignment locationCM002470.1:81272..81510 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23742.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101761g1.7582.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:81197..81206 +
CM002470.1supercontigCM002470.1:81272..81510 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23742.1 vs. NCBI_GenBank
Match: gi|585104926|gb|EWM23742.1| (hypothetical protein Naga_101761g1 [Nannochloropsis gaditana])

HSP 1 Score: 167.162 bits (422), Expect = 1.562e-52
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 
Query:    1 MRCQDTLHRRWRCWSSRGQNQCFHQSRPVSPLSGRCVALLHVALLSTREGGGKEKGRVRKEIFQRGGVDGVQLGKSREITFG 82
            MRCQDTLHRRWRCWSSRGQNQCFHQSRPVSPLSGRCVALLHVALLSTREGGGKEKGRVRKEIFQRGGVDGVQLGKSREITFG
Sbjct:    1 MRCQDTLHRRWRCWSSRGQNQCFHQSRPVSPLSGRCVALLHVALLSTREGGGKEKGRVRKEIFQRGGVDGVQLGKSREITFG 82
The following BLAST results are available for this feature:
BLAST of EWM23742.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104926|gb|EWM23742.1|1.562e-52100.00hypothetical protein Naga_101761g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6947rna6947Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications