EWM23812.1, cds6859 (CDS) Nannochloropsis gaditana

Overview
NameEWM23812.1
Unique Namecds6859
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:693648..695165 -

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Properties
Property NameValue
Start range693648
Start range.
Protein idEWM23812.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100603g3.2226.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:693648..695165 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Homology
[Close]
BLAST of EWM23812.1 vs. NCBI_GenBank
Match: gi|585105062|gb|EWM23812.1| (hypothetical protein Naga_100603g3, partial [Nannochloropsis gaditana])

HSP 1 Score: 999.964 bits (2584), Expect = 0.000e+0
Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 0 
Query:    1 MWHDENAFPRREIAGTEAWPRGEMACGGRRREGGEDDQSMAGARGDREDLAAEVALVASCLERQLHDVVLDLDAATPVLQADAALPASSLAPLVRSLQGLDALLPELRGLTKMARRAQGGNSNKGRSGADPASSDATASGKALGRQAGGQEEDPAEDTKSMATSTEIASSSHMGEAENIRKEGKKRRMDAGPSPGHGMTAAVERLLGPMPVPSGAGVAARHLPSEPIATHRPRPSFSTSAPPSSERVFPPYPDSNVGRSAFSCSFSLRQPPFPTAPRVPVLRLLLVVRDVHQALALERAAQGGGKGVRFHVDVARSVLAGLYRLSLQHFDVVVMESEGSLMGGLEAVRRLRALEGRLEGLKRMHAVRPVLRTRTKEGGREGGAVVKPPSFVVLVGGGSTKDWKRRRREGGREGGREGGRQGGVGFEERAYQAGADMVVMKLEDVRFDRLWRLVHGEEEEAEEEAEEEAEEEIWVDEHNHILLESRPGEEVRGGGVENAEDGSFLGG 506
            MWHDENAFPRREIAGTEAWPRGEMACGGRRREGGEDDQSMAGARGDREDLAAEVALVASCLERQLHDVVLDLDAATPVLQADAALPASSLAPLVRSLQGLDALLPELRGLTKMARRAQGGNSNKGRSGADPASSDATASGKALGRQAGGQEEDPAEDTKSMATSTEIASSSHMGEAENIRKEGKKRRMDAGPSPGHGMTAAVERLLGPMPVPSGAGVAARHLPSEPIATHRPRPSFSTSAPPSSERVFPPYPDSNVGRSAFSCSFSLRQPPFPTAPRVPVLRLLLVVRDVHQALALERAAQGGGKGVRFHVDVARSVLAGLYRLSLQHFDVVVMESEGSLMGGLEAVRRLRALEGRLEGLKRMHAVRPVLRTRTKEGGREGGAVVKPPSFVVLVGGGSTKDWKRRRREGGREGGREGGRQGGVGFEERAYQAGADMVVMKLEDVRFDRLWRLVHGEEEEAEEEAEEEAEEEIWVDEHNHILLESRPGEEVRGGGVENAEDGSFLGG
Sbjct:    1 MWHDENAFPRREIAGTEAWPRGEMACGGRRREGGEDDQSMAGARGDREDLAAEVALVASCLERQLHDVVLDLDAATPVLQADAALPASSLAPLVRSLQGLDALLPELRGLTKMARRAQGGNSNKGRSGADPASSDATASGKALGRQAGGQEEDPAEDTKSMATSTEIASSSHMGEAENIRKEGKKRRMDAGPSPGHGMTAAVERLLGPMPVPSGAGVAARHLPSEPIATHRPRPSFSTSAPPSSERVFPPYPDSNVGRSAFSCSFSLRQPPFPTAPRVPVLRLLLVVRDVHQALALERAAQGGGKGVRFHVDVARSVLAGLYRLSLQHFDVVVMESEGSLMGGLEAVRRLRALEGRLEGLKRMHAVRPVLRTRTKEGGREGGAVVKPPSFVVLVGGGSTKDWKRRRREGGREGGREGGRQGGVGFEERAYQAGADMVVMKLEDVRFDRLWRLVHGEEEEAEEEAEEEAEEEIWVDEHNHILLESRPGEEVRGGGVENAEDGSFLGG 506
[Close]
BLAST of EWM23812.1 vs. NCBI_GenBank
Match: gi|553184059|ref|XP_005854022.1| (hypothetical protein NGA_0433200, partial [Nannochloropsis gaditana CCMP526] >gi|422295041|gb|EKU22340.1| hypothetical protein NGA_0433200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 746.888 bits (1927), Expect = 0.000e+0
Identity = 377/378 (99.74%), Postives = 377/378 (99.74%), Query Frame = 0 
Query:    1 MWHDENAFPRREIAGTEAWPRGEMACGGRRREGGEDDQSMAGARGDREDLAAEVALVASCLERQLHDVVLDLDAATPVLQADAALPASSLAPLVRSLQGLDALLPELRGLTKMARRAQGGNSNKGRSGADPASSDATASGKALGRQAGGQEEDPAEDTKSMATSTEIASSSHMGEAENIRKEGKKRRMDAGPSPGHGMTAAVERLLGPMPVPSGAGVAARHLPSEPIATHRPRPSFSTSAPPSSERVFPPYPDSNVGRSAFSCSFSLRQPPFPTAPRVPVLRLLLVVRDVHQALALERAAQGGGKGVRFHVDVARSVLAGLYRLSLQHFDVVVMESEGSLMGGLEAVRRLRALEGRLEGLKRMHAVRPVLRTRTKEGG 378
            MWHDENAFPRREIAGTEAWPRGEMACGGRRREGGEDDQSMAGARGDREDLAAEVALVASCLERQLHDVVLDLDAATPVLQADAALPASSLAPLVRSLQGLDALLPELRGLTKMARRAQGGNSNKGRSGADPASSDATASGKALGRQAGGQEEDPAEDTKSMATSTEIASSSHMGEAENIRKEGKKRRMDAGPSPGHGMTAAVERLLGPMPVPSGAGVAARHLPSEPIATHRPRPSFSTSAPPSSERVFPPYPDSNVGRSAF CSFSLRQPPFPTAPRVPVLRLLLVVRDVHQALALERAAQGGGKGVRFHVDVARSVLAGLYRLSLQHFDVVVMESEGSLMGGLEAVRRLRALEGRLEGLKRMHAVRPVLRTRTKEGG
Sbjct:    1 MWHDENAFPRREIAGTEAWPRGEMACGGRRREGGEDDQSMAGARGDREDLAAEVALVASCLERQLHDVVLDLDAATPVLQADAALPASSLAPLVRSLQGLDALLPELRGLTKMARRAQGGNSNKGRSGADPASSDATASGKALGRQAGGQEEDPAEDTKSMATSTEIASSSHMGEAENIRKEGKKRRMDAGPSPGHGMTAAVERLLGPMPVPSGAGVAARHLPSEPIATHRPRPSFSTSAPPSSERVFPPYPDSNVGRSAFPCSFSLRQPPFPTAPRVPVLRLLLVVRDVHQALALERAAQGGGKGVRFHVDVARSVLAGLYRLSLQHFDVVVMESEGSLMGGLEAVRRLRALEGRLEGLKRMHAVRPVLRTRTKEGG 378
The following BLAST results are available for this feature:
BLAST of EWM23812.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585105062|gb|EWM23812.1|0.000e+0100.00hypothetical protein Naga_100603g3, partial [Nanno... [more]
gi|553184059|ref|XP_005854022.1|0.000e+099.74hypothetical protein NGA_0433200, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6875rna6875Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications