EWM23841.1, cds6830 (CDS) Nannochloropsis gaditana

Overview
NameEWM23841.1
Unique Namecds6830
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:631447..631480 -
Alignment locationCM002469.1:630631..630953 -
Alignment locationCM002469.1:629229..630419 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23841.1
Productdelta 5 fatty acid desaturase
Orig transcript idgnl|cribi|Naga_100273g7.3657.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:631447..631480 -
CM002469.1supercontigCM002469.1:630631..630953 -
CM002469.1supercontigCM002469.1:629229..630419 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR005804Fatty_acid_desaturase-1
IPR012171Fatty_acid_desaturase
IPR001199Cyt_B5-like_heme/steroid-bd
Homology
BLAST of EWM23841.1 vs. NCBI_GenBank
Match: gi|585105109|gb|EWM23841.1| (delta 5 fatty acid desaturase [Nannochloropsis gaditana])

HSP 1 Score: 1076.23 bits (2782), Expect = 0.000e+0
Identity = 515/515 (100.00%), Postives = 515/515 (100.00%), Query Frame = 0
Query:    1 MPPQNDAALGSGLFRNRFGRKSSASSLLVNDGSMGSTEPVLSTAAVPATEPAGKSYTWQEVAEHNTEKSLWVTVRGKVYDISSWVDNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLNKFEIGRVTSYEFPQYKADTRGFYKALCTRVNDYFVAHKLNPKDPIPGIWRMCLVALVALASFVVCNGYVGVEGTWAGTTWARLVAAVVFGICQALPLLHVMHDSSHLAFGNTERWWQVGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFLADPDLPDKAAGDPRRLVQKQAWQAMYKWQHLYLPPLYGILGIKFRVQDIMETFGSGTNGPVRVNPLSFFQWAEMIFTKMFWAGWRIAFPLLSPSFHTGWAAFSALFLVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREGEDGNIVDEWAVSQIKSSVDYAHNNPVTTFLCGALNYQVTHHLFPTVSQYHYPAIAPIIQDVCREFNVDYKVLPDFVTAFHAHIAHLKTLGERGEAAEVHMG 515
            MPPQNDAALGSGLFRNRFGRKSSASSLLVNDGSMGSTEPVLSTAAVPATEPAGKSYTWQEVAEHNTEKSLWVTVRGKVYDISSWVDNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLNKFEIGRVTSYEFPQYKADTRGFYKALCTRVNDYFVAHKLNPKDPIPGIWRMCLVALVALASFVVCNGYVGVEGTWAGTTWARLVAAVVFGICQALPLLHVMHDSSHLAFGNTERWWQVGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFLADPDLPDKAAGDPRRLVQKQAWQAMYKWQHLYLPPLYGILGIKFRVQDIMETFGSGTNGPVRVNPLSFFQWAEMIFTKMFWAGWRIAFPLLSPSFHTGWAAFSALFLVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREGEDGNIVDEWAVSQIKSSVDYAHNNPVTTFLCGALNYQVTHHLFPTVSQYHYPAIAPIIQDVCREFNVDYKVLPDFVTAFHAHIAHLKTLGERGEAAEVHMG
Sbjct:    1 MPPQNDAALGSGLFRNRFGRKSSASSLLVNDGSMGSTEPVLSTAAVPATEPAGKSYTWQEVAEHNTEKSLWVTVRGKVYDISSWVDNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLNKFEIGRVTSYEFPQYKADTRGFYKALCTRVNDYFVAHKLNPKDPIPGIWRMCLVALVALASFVVCNGYVGVEGTWAGTTWARLVAAVVFGICQALPLLHVMHDSSHLAFGNTERWWQVGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFLADPDLPDKAAGDPRRLVQKQAWQAMYKWQHLYLPPLYGILGIKFRVQDIMETFGSGTNGPVRVNPLSFFQWAEMIFTKMFWAGWRIAFPLLSPSFHTGWAAFSALFLVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREGEDGNIVDEWAVSQIKSSVDYAHNNPVTTFLCGALNYQVTHHLFPTVSQYHYPAIAPIIQDVCREFNVDYKVLPDFVTAFHAHIAHLKTLGERGEAAEVHMG 515          
BLAST of EWM23841.1 vs. NCBI_GenBank
Match: gi|553187398|ref|XP_005854602.1| (delta 5 fatty acid desaturase [Nannochloropsis gaditana CCMP526] >gi|422294454|gb|EKU21754.1| delta 5 fatty acid desaturase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1008.44 bits (2606), Expect = 0.000e+0
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 0
Query:   34 MGSTEPVLSTAAVPATEPAGKSYTWQEVAEHNTEKSLWVTVRGKVYDISSWVDNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLNKFEIGRVTSYEFPQYKADTRGFYKALCTRVNDYFVAHKLNPKDPIPGIWRMCLVALVALASFVVCNGYVGVEGTWAGTTWARLVAAVVFGICQALPLLHVMHDSSHLAFGNTERWWQVGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFLADPDLPDKAAGDPRRLVQKQAWQAMYKWQHLYLPPLYGILGIKFRVQDIMETFGSGTNGPVRVNPLSFFQWAEMIFTKMFWAGWRIAFPLLSPSFHTGWAAFSALFLVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREGEDGNIVDEWAVSQIKSSVDYAHNNPVTTFLCGALNYQVTHHLFPTVSQYHYPAIAPIIQDVCREFNVDYKVLPDFVTAFHAHIAHLKTLGERGEAAEVHMG 515
            MGSTEPVLSTAAVPATEPAGKSYTWQEVAEHNTEKSLWVTVRGKVYDISSWVDNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLNKFEIGRVTSYEFPQYKADTRGFYKALCTRVNDYFVAHKLNPKDPIPGIWRMCLVALVALASFVVCNGYVGVEGTWAGTTWARLVAAVVFGICQALPLLHVMHDSSHLAFGNTERWWQVGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFLADPDLPDKAAGDPRRLVQKQAWQAMYKWQHLYLPPLYGILGIKFRVQDIMETFGSGTNGPVRVNPLSFFQWAEMIFTKMFWAGWRIAFPLLSPSFHTGWAAFSALFLVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREGEDGNIVDEWAVSQIKSSVDYAHNNPVTTFLCGALNYQVTHHLFPTVSQYHYPAIAPIIQDVCREFNVDYKVLPDFVTAFHAHIAHLKTLGERGEAAEVHMG
Sbjct:    1 MGSTEPVLSTAAVPATEPAGKSYTWQEVAEHNTEKSLWVTVRGKVYDISSWVDNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLNKFEIGRVTSYEFPQYKADTRGFYKALCTRVNDYFVAHKLNPKDPIPGIWRMCLVALVALASFVVCNGYVGVEGTWAGTTWARLVAAVVFGICQALPLLHVMHDSSHLAFGNTERWWQVGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFLADPDLPDKAAGDPRRLVQKQAWQAMYKWQHLYLPPLYGILGIKFRVQDIMETFGSGTNGPVRVNPLSFFQWAEMIFTKMFWAGWRIAFPLLSPSFHTGWAAFSALFLVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREGEDGNIVDEWAVSQIKSSVDYAHNNPVTTFLCGALNYQVTHHLFPTVSQYHYPAIAPIIQDVCREFNVDYKVLPDFVTAFHAHIAHLKTLGERGEAAEVHMG 482          
BLAST of EWM23841.1 vs. NCBI_GenBank
Match: gi|1154501353|gb|AQX92137.1| (delta-5 fatty acid desaturase [Nannochloropsis oceanica])

HSP 1 Score: 878.241 bits (2268), Expect = 0.000e+0
Identity = 426/527 (80.83%), Postives = 460/527 (87.29%), Query Frame = 0
Query:    1 MPPQNDAALGSGLFRNRFGRKSSASSLLVNDGSMGSTEPVLSTAAVPATEP----AGKSYTWQEVAEHNTEKSLWVTVRGKVYDISSWVDNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLNKFEIGRVTSYEFPQYKADTRGFYKALCTRVNDYFVAHKLNPKDPIPGIWRMCLVALVALASFVVCNGYVGVEGTWAGTTWARLVAAVVFGICQALPLLHVMHDSSHLAFGNTERWWQVGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFLADPDLPDKAAGDPRRLVQKQAWQAMYKWQHLYLPPLYGILGIKFRVQDIMETFGSGTNGPVRVNPLSFFQWAEMIFTKMFWAGWRIAFPLLSPSFHTGWAAFSALFLVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPRE--------GEDGNIVDEWAVSQIKSSVDYAHNNPVTTFLCGALNYQVTHHLFPTVSQYHYPAIAPIIQDVCREFNVDYKVLPDFVTAFHAHIAHLKTLGERGEAAEVHMG 515
            MPPQNDAALG G FRNRF RK+S SSL+++D    STE V +  A  A        GK+YTW+EVAEHNTEKSLWVTVRGKVYDISSWV+NHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVL KFEIG V+S+EFPQYK DTRGFYK LCTRV DYF   KLNPKDP PGIWRM LVA+VA+ASF+VCNG+VG+EG       AR VAAVVFG+CQALPLLHVMHDSSHLAFGNTERWWQ+GGRLAMDFFAGANMTSWHNQHVIGHHIYTNVF+ADP LPDK+AGDPRRLV+KQAW+ MYKWQHLYLPPLYGILGIKFRVQD+MET+GSG+NGPVRVNPLS +QW EMIFTK+FW GWR+ FPL+S SF T  A F  LF VSEFMTGYFLAFNFQVSHVSSECDYPLGEAPRE        G++G I DEWAVSQ+KSSVDYAHNN +TTFLCGALNYQVTHHLFPTVSQYHYP IAPIIQ+VC+EFNVDYKVLPDFVTAFHAHIAHLK LGERGEAAEVHMG
Sbjct:    1 MPPQNDAALGGGFFRNRFTRKNSTSSLIIDDTPATSTESVAAAEATVAATAAAAAGGKTYTWEEVAEHNTEKSLWVTVRGKVYDISSWVNNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLGKFEIGTVSSHEFPQYKPDTRGFYKTLCTRVGDYFKQEKLNPKDPFPGIWRMLLVAMVAVASFMVCNGWVGLEGGVLAGWGARFVAAVVFGVCQALPLLHVMHDSSHLAFGNTERWWQMGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFMADPALPDKSAGDPRRLVKKQAWEGMYKWQHLYLPPLYGILGIKFRVQDVMETYGSGSNGPVRVNPLSPWQWGEMIFTKLFWFGWRVVFPLMSASFRTSMATFWPLFFVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREEAVEGSAGGKEG-IKDEWAVSQVKSSVDYAHNNALTTFLCGALNYQVTHHLFPTVSQYHYPKIAPIIQEVCKEFNVDYKVLPDFVTAFHAHIAHLKALGERGEAAEVHMG 526          
BLAST of EWM23841.1 vs. NCBI_GenBank
Match: gi|23894018|emb|CAD53323.1| (delta 5 fatty acid desaturase [Phytophthora megasperma])

HSP 1 Score: 532.717 bits (1371), Expect = 0.000e+0
Identity = 259/462 (56.06%), Postives = 327/462 (70.78%), Query Frame = 0
Query:   55 SYTWQEVAEHNTEKSLWVTVRGKVYDISSWVDNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLNKFEIGR-VTSYEFPQYKADTRGFYKALCTRVNDYFVAHKLNPKDPIPGIWRMCLVALVALASFVVCNGYVGVEGTWAGTTWARLVAAVVFGICQALPLLHVMHDSSHLAFGNTERWWQVGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFLADPDLPDKAAGDPRRLVQKQAWQAMYKWQHLYLPPLYGILGIKFRVQDIMETFGSGTNGPVRVNPLSFFQWAEMIFTKMFWAGWRIAFPLLSPSFHTGWAAFSALFLVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREGEDGNIVDEWAVSQIKSSVDYAHNNPVTTFLCGALNYQVTHHLFPTVSQYHYPAIAPIIQDVCREFNVDYKVLPDFVTAFHAHIAHLKTLGERGEAAEVHMG 515
            ++TWQ+VA+HNT KS WVT+RG VYD++ W D HPGG+E++LL +GR+ T  FDSYHPF+++  ++L K+ IG+ V   EFP YK DT GFYK  C RVN YF  +KL+P+ P  G+WRM LVA+V   +      Y+G+     G  +A      +FG+CQALPLLHVMHD+SH A  ++   W++ GRLAMD+ AGANM SW NQHV+GHHIYTNV  ADPDLP     D RR+V +Q    +YK+QHLYLPPLYG+LG+KFRVQD+ ETF + TNGP+RVNPLS   WAEMI +K FW  +RI  PL         A F  +F ++EF TG++LAFNFQVSHVS+ C+YP G+     E  +I DEWA+SQ+KSSVDY H + +TTFL GALNYQVTHHLFP VSQYHYPAIAP+I DVC ++ V Y VLPDF  A   H  HL  +G+ G+   +HMG
Sbjct:   29 TFTWQDVAKHNTAKSAWVTIRGVVYDVTEWADRHPGGRELVLLHSGRECTDTFDSYHPFSDRADKILAKYAIGKLVGGSEFPTYKPDT-GFYKECCDRVNQYFKDNKLDPRSPYSGLWRMILVAIVGAVA------YMGMNQLLPGNIYAHYAWGALFGVCQALPLLHVMHDASHAAITSSPTGWRLIGRLAMDWVAGANMVSWLNQHVVGHHIYTNVAGADPDLPVDFKSDVRRIVYRQVLLPIYKYQHLYLPPLYGVLGLKFRVQDVFETFVTLTNGPLRVNPLSVGDWAEMILSKAFWVFYRIYLPL--AVLQVDPARFWGVFFLAEFSTGWYLAFNFQVSHVSTACEYPGGDE----EVTSIDDEWAISQVKSSVDYGHGSFITTFLTGALNYQVTHHLFPGVSQYHYPAIAPLILDVCHKYKVKYNVLPDFTAAMAGHFDHLVIMGKMGKRVTIHMG 477          
BLAST of EWM23841.1 vs. NCBI_GenBank
Match: gi|1214689584|gb|OWZ05109.1| (Delta(5) fatty acid desaturase [Phytophthora megakarya])

HSP 1 Score: 532.332 bits (1370), Expect = 0.000e+0
Identity = 264/489 (53.99%), Postives = 337/489 (68.92%), Query Frame = 0
Query:   30 NDGSMGSTEPV--LSTAAVPATEPAGKSYTWQEVAEHNTEKSLWVTVRGKVYDISSWVDNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLNKFEIGR-VTSYEFPQYKADTRGFYKALCTRVNDYFVAHKLNPKDPIPGIWRMCLVALVALASFVVCNGYVGVEGTWAGTTWARLVAAVVFGICQALPLLHVMHDSSHLAFGNTERWWQVGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFLADPDLPDKAAGDPRRLVQKQAWQAMYKWQHLYLPPLYGILGIKFRVQDIMETFGSGTNGPVRVNPLSFFQWAEMIFTKMFWAGWRIAFPLLSPSFHTGWAAFSALFLVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREGEDGNIVDEWAVSQIKSSVDYAHNNPVTTFLCGALNYQVTHHLFPTVSQYHYPAIAPIIQDVCREFNVDYKVLPDFVTAFHAHIAHLKTLGERGEAAEVHMG 515
             D +M + E +     A+   T+  G ++TWQ+VA+HNT  S WV +RG VYD++ W D HPGG+E++LL +GR+ T  FDSYHPF+ +  ++L K+ IG+ V   EFPQYK DT GFYK  C RVN YF  +KL+P+ P  G+WRM LVA++ +A+      Y+G+    +   +A      +FG+CQALPLLHVMHD+SH A  ++   W++ GRLAMD+ AGANM SW NQHV+GHHIYTNV  ADPDLP     D RR+V +Q    +YK+QHLYLPPLYG+LG+KFRVQDI ETF + TNGP+RVNP S   W EMI +K FWA +RI  PL+     +  A F  +F ++EFMTG++LAFNFQVSHVS+ C+YP G+     E   I DEWAVSQ+KSSVDY H + +T FL GALNYQVTHHLFP VSQYHYPAIAPII DVC ++ + Y VLP F  A   H  HL  +G+ G+   VHMG
Sbjct:    6 TDKAMNTNEGLHQRKGASAATTDKDGATFTWQDVAKHNTANSAWVIIRGVVYDVTEWADRHPGGRELVLLHSGRECTDTFDSYHPFSNRADKILGKYAIGKLVGGSEFPQYKPDT-GFYKECCDRVNQYFKDNKLDPRSPYSGLWRMTLVAILGVAA------YMGMNQQLSDNIYAHYAWGALFGVCQALPLLHVMHDASHAAITSSPTGWRLIGRLAMDWVAGANMVSWLNQHVVGHHIYTNVAGADPDLPVDFKSDVRRIVYRQVLLPIYKFQHLYLPPLYGVLGLKFRVQDIFETFIALTNGPLRVNPHSVGDWVEMIISKAFWAFYRIYIPLVVLQVDS--ARFWGVFFLAEFMTGWYLAFNFQVSHVSTACEYPGGDE----EVTAIEDEWAVSQVKSSVDYGHGSFLTAFLTGALNYQVTHHLFPGVSQYHYPAIAPIIIDVCNKYKIKYTVLPTFTEALAGHFDHLVIMGKMGKPVSVHMG 481          
BLAST of EWM23841.1 vs. NCBI_GenBank
Match: gi|301121108|ref|XP_002908281.1| (Delta(5) fatty acid desaturase, putative [Phytophthora infestans T30-4] >gi|262103312|gb|EEY61364.1| Delta(5) fatty acid desaturase, putative [Phytophthora infestans T30-4] >gi|349733995|gb|AEQ16444.1| delta5 desaturase [Phytophthora infestans])

HSP 1 Score: 531.561 bits (1368), Expect = 0.000e+0
Identity = 263/475 (55.37%), Postives = 329/475 (69.26%), Query Frame = 0
Query:   42 STAAVPATEPAGKSYTWQEVAEHNTEKSLWVTVRGKVYDISSWVDNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLNKFEIGR-VTSYEFPQYKADTRGFYKALCTRVNDYFVAHKLNPKDPIPGIWRMCLVALVALASFVVCNGYVGVEGTWAGTTWARLVAAVVFGICQALPLLHVMHDSSHLAFGNTERWWQVGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFLADPDLPDKAAGDPRRLVQKQAWQAMYKWQHLYLPPLYGILGIKFRVQDIMETFGSGTNGPVRVNPLSFFQWAEMIFTKMFWAGWRIAFPLLSPSFHTGWAAFSALFLVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREGEDGNIVDEWAVSQIKSSVDYAHNNPVTTFLCGALNYQVTHHLFPTVSQYHYPAIAPIIQDVCREFNVDYKVLPDFVTAFHAHIAHLKTLGERGEAAEVHMG 515
             TAA  AT  +  +YTWQ+VA+HNT+ S WV +RG VYD++ W D HPGG+E++LL +GR+ T  FDSYHPF+ +  ++L K+ IG+ V   EFP YK DT GFY+  C RV+ YF  + L+P+ P  G+ RM  VA++   S      YVG+    +   +A      +FG CQALPLLHVMHD+SH A  ++   W++ GRLAMD+ AGANM SW NQHV+GHHIYTNV  ADPDLP     D RR+V +Q    +YK+QH+YLPPLYG+LG+KFRVQDI ETF S TNGP+RVNPLS   WAEMI +K FWA +RI  PL+        A F  +FL++EF+TG++LAFNFQVSHVS+ CDYP G+     E   I DEWA+SQIKSSVDYAH + +T FL GALNYQVTHHLFP VSQYHYPAIAPII DVC ++ + Y VLP F  A   H  HL  +G+ G+   VHMG
Sbjct:   55 KTAADAATNKSAATYTWQDVAKHNTDNSAWVIIRGIVYDVTEWADRHPGGRELVLLHSGRECTDTFDSYHPFSNRAEKILAKYAIGKLVGGSEFPTYKPDT-GFYRECCDRVHQYFKDNNLDPRSPYSGLLRMLFVAILGAVS------YVGMNQLLSDNIYAHYAWGALFGACQALPLLHVMHDASHAAITSSPTGWRLIGRLAMDWVAGANMVSWLNQHVVGHHIYTNVAGADPDLPVDFKSDVRRIVYRQVLLPIYKFQHIYLPPLYGVLGLKFRVQDIFETFISLTNGPLRVNPLSIGDWAEMIISKAFWAFYRIYIPLV--VLQVNPARFWGVFLLAEFVTGWYLAFNFQVSHVSTACDYPGGDE----EVSAIEDEWAISQIKSSVDYAHGSFLTAFLTGALNYQVTHHLFPGVSQYHYPAIAPIIMDVCNKYKIKYTVLPTFSAALAGHFEHLVVMGKMGKRVTVHMG 516          
BLAST of EWM23841.1 vs. NCBI_GenBank
Match: gi|813123824|ref|XP_012196562.1| (hypothetical protein SPRG_02606 [Saprolegnia parasitica CBS 223.65] >gi|641539093|gb|KDO32914.1| hypothetical protein SPRG_02606 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 531.176 bits (1367), Expect = 0.000e+0
Identity = 272/501 (54.29%), Postives = 347/501 (69.26%), Query Frame = 0
Query:   18 FGRKSSASSLLVNDGSMG-STEPVLSTAAVPATEPAGKS-YTWQEVAEHNTEKSLWVTVRGKVYDISSWVDNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLNKFEIGRVTS-YEFPQYKADTRGFYKALCTRVNDYFVAHKLNPKDPIPGIWRMCLVALVALASFVVCNGYVGVEGTWAGTTWARLVAAVVFGICQALPLLHVMHDSSHLAFGNTERWWQVGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFLADPDLPDKAAGDPRRLVQKQAWQAMYKWQHLYLPPLYGILGIKFRVQDIMETFGSGTNGPVRVNPLSFFQWAEMIFTKMFWAGWRIAFPLLSPSFHTGWAAFSALFLVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREGEDGNIVDEWAVSQIKSSVDYAHNNPVTTFLCGALNYQVTHHLFPTVSQYHYPAIAPIIQDVCREFNVDYKVLPDFVTAFHAHIAHLKTLGERGEAAEVHMG 515
            FG +SSA +      SM   TE     AAV  T  AGK  +TWQEVA+HNT  S W+ +RGKVYD++ W   HPGG+E++LL AGR+ T  FDSYHPF++K   +LNK+EIG  T   EFP +K D+ GFYK    RV +YF  + L+P+D  PG+WRM LV  VA        G       ++     +L AA +FG+CQALPLLHVMHDSSH ++ N   +  V GR AMD+FAG +M SW NQHV+GHHIYTNV  +DPDLP    GD RR+V +Q +Q MY +QH+YLPPLYG+LG+KFR+QD  +TFGS TNGP+RVNP +   W  MI +K FWA +R+  PL           + A+F ++EF+TG++LAFNFQVSHVS+EC YP G+  +      + DEWAVSQ+K+SVDYAH + +TTFL GALNYQV HHLFP+VSQYHYPAIAPII DVC+E+N+ Y +LPDF TAF AH+ HL+ +G++G AA +HMG
Sbjct:    8 FGFRSSAKT----SSSMAPQTELRQRHAAVAETPIAGKKVFTWQEVAQHNTAASAWIIIRGKVYDVTEWATKHPGGREMVLLHAGREATDTFDSYHPFSDKAESILNKYEIGTFTGPTEFPTFKPDS-GFYKECRKRVGEYFKKNNLHPQDGFPGLWRMMLVFAVA--------GLALYGMHFSTIFALQLAAAALFGVCQALPLLHVMHDSSHASYTNMPFFHYVVGRFAMDWFAGGSMVSWLNQHVVGHHIYTNVAGSDPDLPVNMDGDIRRIVNRQVFQPMYAFQHIYLPPLYGVLGLKFRIQDFTDTFGSHTNGPIRVNPHALSTWVAMICSKSFWAFYRVYLPL--AVLQMPIKTYLAIFFLAEFVTGWYLAFNFQVSHVSTECGYPCGDEAKMA----LQDEWAVSQVKTSVDYAHGSWMTTFLAGALNYQVVHHLFPSVSQYHYPAIAPIIVDVCKEYNIKYAILPDFTTAFIAHLKHLRNMGQQGIAATIHMG 489          
BLAST of EWM23841.1 vs. NCBI_GenBank
Match: gi|16033740|gb|AAL13311.1| (delta-5 fatty acid desaturase [Pythium irregulare])

HSP 1 Score: 529.25 bits (1362), Expect = 0.000e+0
Identity = 259/469 (55.22%), Postives = 331/469 (70.58%), Query Frame = 0
Query:   53 GKSYTWQEVAEHNTEKSLWVTVRGKVYDISSWVDNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLNKFEIGR-VTSYEFPQYKADTRGFYKALCTRVNDYFVAHKLNPKDPIPGIWRMCLV-ALVALASFVVCNGYVGVEGTWAGTTWARLVAAVVFGICQALPLLHVMHDSSHLAFGNTERWWQVGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFLADPDLPDKAAGDPRRLVQKQAWQAMYKWQHLYLPPLYGILGIKFRVQDIMETFGSGTNGPVRVNPLSFFQWAEMIFTKMFWAGWRIAFPL----LSPSFHTGWAAFSALFLVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREGEDGNIVDEWAVSQIKSSVDYAHNNPVTTFLCGALNYQVTHHLFPTVSQYHYPAIAPIIQDVCREFNVDYKVLPDFVTAFHAHIAHLKTLGERGEAAEVHMG 515
            GK++TWQEVA+HNT KS WV +RG+VYD++ W D HPGG E+++L +GR+ T  F SYHPF+ +  ++L K++IG+ V  YEFP +K D+ GFYK    RV +YF  + L+PK    G+WRM  V A+ ALA       Y+G+     G  +A+    VVFG+ QALPLLHVMHDSSH A  ++   WQ+ GR  MD+FAGA+M SW NQHV+GHHIYTNV  ADPDLP     D RR+V +Q    +YK+QH+YLPPLYG+LG+KFR+QD+ ETF S TNGPVRVNP     W +MIF K FW  +RI  PL    ++PS       F  +F ++EF TG++LAFNFQVSHVS+EC+YP G+AP       + DEWA+SQ+KSSVDYAH +P+  FLCGALNYQVTHHL+P +SQYHYPAIAPII DVC+++N+ Y VLP F  A  AH  HLK +GE G+  E+HMG
Sbjct:    6 GKTFTWQEVAKHNTAKSAWVIIRGEVYDVTEWADKHPGGSELIVLHSGRECTDTFYSYHPFSNRADKILAKYKIGKLVGGYEFPVFKPDS-GFYKECSERVAEYFKTNNLDPKAAFAGLWRMVFVFAVAALA-------YMGMNELIPGNVYAQYAWGVVFGVFQALPLLHVMHDSSHAACSSSPAMWQIIGRGVMDWFAGASMVSWLNQHVVGHHIYTNVAGADPDLPVDFESDVRRIVHRQVLLPIYKFQHIYLPPLYGVLGLKFRIQDVFETFVSLTNGPVRVNPHPVSDWVQMIFAKAFWTFYRIYIPLVWLKITPS------TFWGVFFLAEFTTGWYLAFNFQVSHVSTECEYPCGDAP----SAEVGDEWAISQVKSSVDYAHGSPLAAFLCGALNYQVTHHLYPGISQYHYPAIAPIIIDVCKKYNIKYTVLPTFTEALLAHFKHLKNMGELGKPVEIHMG 456          
BLAST of EWM23841.1 vs. NCBI_GenBank
Match: gi|1173955690|gb|OQS02621.1| (Delta(5) fatty acid desaturase [Thraustotheca clavata])

HSP 1 Score: 528.094 bits (1359), Expect = 0.000e+0
Identity = 259/479 (54.07%), Postives = 336/479 (70.15%), Query Frame = 0
Query:   41 LSTAAVPATEPAG---KSYTWQEVAEHNTEKSLWVTVRGKVYDISSWVDNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLNKFEIGRVTS-YEFPQYKADTRGFYKALCTRVNDYFVAHKLNPKDPIPGIWRMCLVALVALASFVVCNGYVGVEGTWAGTTWARLVAAVVFGICQALPLLHVMHDSSHLAFGNTERWWQVGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFLADPDLPDKAAGDPRRLVQKQAWQAMYKWQHLYLPPLYGILGIKFRVQDIMETFGSGTNGPVRVNPLSFFQWAEMIFTKMFWAGWRIAFPLLSPSFHTGWAAFSALFLVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREGEDGNIVDEWAVSQIKSSVDYAHNNPVTTFLCGALNYQVTHHLFPTVSQYHYPAIAPIIQDVCREFNVDYKVLPDFVTAFHAHIAHLKTLGERGEAAEVHMG 515
            L    VP T+      ++YTWQEVA+HNT  S W+ +RGKVYD++ W   HPGG+E+++L +GR+ T  FDSYHPF++K   +L K+EIG  T   EFP +K DT GFYK    RV +YF  +KL+P+D  PG+WRM +V  +A  S    N        +      +L  AVVFG+CQALPLLHVMHDSSH ++ N   +  + GR AMD+FAG +M SW NQHV+GHHIYTNV  +DPDLP   +GD RR+V++Q +Q +Y +Q+LYLPPLYG+LG+KFR+QD  ETFG+ TNGP+RVNP +   W  +I +K FWA +RI  PL           F ALF ++EF+TG++LAFNFQVSHVS+EC YP G+         I DEWAVSQ+K+SVDYAH +  TTF+ GALNYQV HHLFP+VSQYHYPAIAPI++DVC+E+N+ Y +LPDF TAF AH+ HL+ +G++G  A VHMG
Sbjct:    7 LRQRQVPKTDNVAAVKQAYTWQEVAQHNTAASAWIIIRGKVYDVTEWAKKHPGGQEMVILHSGREATDTFDSYHPFSDKAESILAKYEIGTFTGPTEFPTFKPDT-GFYKECRKRVGEYFKKNKLHPQDGFPGLWRMAIVFSIAGLSLYGMN--------FTTIYPLQLFCAVVFGVCQALPLLHVMHDSSHASYTNKPFFQYIVGRFAMDWFAGGSMVSWLNQHVVGHHIYTNVAGSDPDLPVDFSGDVRRIVERQVFQPLYAFQYLYLPPLYGVLGLKFRIQDFTETFGTHTNGPIRVNPHALSTWISLICSKSFWAFYRIYIPLAVLGMPI--KTFLALFFLAEFVTGWYLAFNFQVSHVSTECGYPCGQEATMA----IQDEWAVSQVKTSVDYAHGSWFTTFMAGALNYQVVHHLFPSVSQYHYPAIAPIVKDVCKEYNIKYAILPDFTTAFAAHMQHLRDMGKQGIPATVHMG 470          
BLAST of EWM23841.1 vs. NCBI_GenBank
Match: gi|669148156|ref|XP_008609640.1| (hypothetical protein SDRG_05689 [Saprolegnia diclina VS20] >gi|530738617|gb|EQC36859.1| hypothetical protein SDRG_05689 [Saprolegnia diclina VS20])

HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0
Identity = 264/482 (54.77%), Postives = 340/482 (70.54%), Query Frame = 0
Query:   36 STEPVLSTAAVPATEPAGK-SYTWQEVAEHNTEKSLWVTVRGKVYDISSWVDNHPGGKEILLLAAGRDITYAFDSYHPFTEKPTQVLNKFEIGRVTS-YEFPQYKADTRGFYKALCTRVNDYFVAHKLNPKDPIPGIWRMCLVALVALASFVVCNGYVGVEGTWAGTTWARLVAAVVFGICQALPLLHVMHDSSHLAFGNTERWWQVGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFLADPDLPDKAAGDPRRLVQKQAWQAMYKWQHLYLPPLYGILGIKFRVQDIMETFGSGTNGPVRVNPLSFFQWAEMIFTKMFWAGWRIAFPLLSPSFHTGWAAFSALFLVSEFMTGYFLAFNFQVSHVSSECDYPLGEAPREGEDGNIVDEWAVSQIKSSVDYAHNNPVTTFLCGALNYQVTHHLFPTVSQYHYPAIAPIIQDVCREFNVDYKVLPDFVTAFHAHIAHLKTLGERGEAAEVHMG 515
             TE     AAV  T  AGK ++TWQEVA+HNT  S W+ +RGKVYD++ W + HPGG+E++LL AGR+ T  FDSYHPF++K   +LNK+EIG  T   EFP +K DT GFYK    RV +YF  + L+P+D  PG+WRM +V  VA        G       ++     +L AA +FG+CQALPLLHVMHDSSH ++ N   +  V GR AMD+FAG +M SW NQHV+GHHIYTNV  +DPDLP    GD RR+V +Q +Q MY +QH+YLPPLYG+LG+KFR+QD  +TFGS TNGP+RVNP +   W  MI +K FWA +R+  PL           + A+F ++EF+TG++LAFNFQVSHVS+EC YP G+  +      + DEWAVSQ+K+SVDYAH + +TTFL GALNYQV HHLFP+VSQYHYPAIAPII DVC+E+N+ Y +LPDF +AF AH+ HL+ +G++G AA +HMG
Sbjct:    4 QTELRQRHAAVDETPVAGKKAFTWQEVAQHNTATSAWIIIRGKVYDVTEWANKHPGGREMVLLHAGREATDTFDSYHPFSDKAESILNKYEIGTFTGPTEFPTFKPDT-GFYKECRKRVGEYFKKNNLHPQDGFPGLWRMMVVFAVA--------GLALYGMHFSTIFALQLAAAALFGVCQALPLLHVMHDSSHASYTNMPFFHYVVGRFAMDWFAGGSMVSWLNQHVVGHHIYTNVAGSDPDLPVNMDGDIRRIVNRQVFQPMYAFQHIYLPPLYGVLGLKFRIQDFTDTFGSHTNGPIRVNPHALSTWMAMISSKSFWAFYRVYLPL--AVLQMPIKTYLAIFFLAEFVTGWYLAFNFQVSHVSTECGYPCGDEAKMA----LQDEWAVSQVKTSVDYAHGSWMTTFLAGALNYQVVHHLFPSVSQYHYPAIAPIIVDVCKEYNIKYAILPDFTSAFVAHLKHLRNMGQQGIAATIHMG 470          
The following BLAST results are available for this feature:
BLAST of EWM23841.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105109|gb|EWM23841.1|0.000e+0100.00delta 5 fatty acid desaturase [Nannochloropsis gad... [more]
gi|553187398|ref|XP_005854602.1|0.000e+0100.00delta 5 fatty acid desaturase [Nannochloropsis gad... [more]
gi|1154501353|gb|AQX92137.1|0.000e+080.83delta-5 fatty acid desaturase [Nannochloropsis oce... [more]
gi|23894018|emb|CAD53323.1|0.000e+056.06delta 5 fatty acid desaturase [Phytophthora megasp... [more]
gi|1214689584|gb|OWZ05109.1|0.000e+053.99Delta(5) fatty acid desaturase [Phytophthora megak... [more]
gi|301121108|ref|XP_002908281.1|0.000e+055.37Delta(5) fatty acid desaturase, putative [Phytopht... [more]
gi|813123824|ref|XP_012196562.1|0.000e+054.29hypothetical protein SPRG_02606 [Saprolegnia paras... [more]
gi|16033740|gb|AAL13311.1|0.000e+055.22delta-5 fatty acid desaturase [Pythium irregulare][more]
gi|1173955690|gb|OQS02621.1|0.000e+054.07Delta(5) fatty acid desaturase [Thraustotheca clav... [more]
gi|669148156|ref|XP_008609640.1|0.000e+054.77hypothetical protein SDRG_05689 [Saprolegnia dicli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6846rna6846Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications