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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100865g2.7099.mrna |
| Orig protein id | gnl|cribi|Naga_100865g2.7099 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:619119..621063 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6840 ID=rna6840|Name=rna6840|organism=Nannochloropsis gaditana|type=mRNA|length=1215bp
ACGCCAGCAAACAAAAATCACGCATCGCGTCTACCACGCATTGACAGGTG
TTGTTACATTGGAGCGCTGCAGGATTTGTATCGCTTTCCCCGGGAGCGTG
GACGGGGCGCGTCCCTTTTGCTGCGTCCAATCCCGGTCGCAGGAAGCTGA
GGCACCGTGTTCACATGGCCGGCAATTCACAGCCTGCGTCCCGTTTGAAG
CCATCAATATGTTTGCATTTACTCTTAATGGTTATGAGCAGCTTGATAAC
TGCTGGCTCCGCCCGGGCATTTGCCCTTTTTCTCCGCCCATTTCCTTCAT
CTCCTCCCCATCACCTGCCCCTTGCCTCCCTGTCCTCCTCGTTGTCGAGC
ACTTCCCGTCTTTCTGACAGCAGAAGAGGCCACCACCCGACATGGATATC
AAGGAACAGGAGACCAAGAAGACGACTTTTCTTCACAACCGGACCCATAC
ACCAAACAATGGCTCCTTCCTCCACGTCCCCTGCGACCAACACCGCGACC
AACCGCTCTTGTTCGATTGATTTCGAGCGCCTGGGCCTTTTGCACGCCCC
CGTCCTCCAATCCCTTCGCAAAGCGGCGGTGAATGGCAACGTAGAAGAGG
CCGGTGCCCTAATCGCCCGCCTAGAGCTAGACCACGTGCCCCTGGACCTC
CTCACCCTCACCCACTACATGCAAGCTCACATCGTTCGACGCGATGCCCC
TGGCGCCGAAGCCGTGCTGGCCCGGATGAAAACGCTGGGGCTCTTGCCGG
ACATCGTCCCGTACTCGATGCTGTTGAATTTACACGCCAGTCGGGGCAAC
GTGGGCAAGGCGGAGGAGGTCTTCGGGACCATGAGGGAGGAGGGCGGCTT
GGTCCCGTCGGTCCGGGCGTACACGTCCTTGATGAAGGCCTATGCCGTCT
CACGGGACCCGGAGGGCGCCGAGGACGTCCTCTTTCGGATGGCGGCCGCC
GGTGTGGCCCCCGACGTCCACGCCTACACGATGCTCCTCCGGGCCTACGC
CAACGTGGGGGACGTGGCGGGGGCCGAGGATGTCATGCGCCGGGTGCTGT
TGGCGGTGGAGGGGGGGAAGGTGGGCGGGCGGGAAGGCGGGGAGGTGGTG
CCTGACCTGGTCATTTTCAATGCGTTGCTGCGTGTCTATGTGCGGAGCAA
AGGGCCCGATGCGGCCAGGTTAAGAGGAGGATGGGATGCGCGGGGAGGGA
GGGGGGGGAGGGCAA back to topprotein sequence of rna6840 >rna6840-protein ID=rna6840-protein|Name=rna6840|organism=Nannochloropsis gaditana|type=polypeptide|length=268bp
MSSCPQCYVGQCRKHKLQDHGARERALLSSRSELQRRLYESLVQPHVDTL
KTTKKATAEAEAGHCRYRDAVGKDREKAQRQKSKFSEEQVRKAQALGGLR
GDLLRTMLANDSDFEDGAEGGKEGNTGTSGEPADRKKKRRREAAEREERK
ARKKKKKALRKEEDRKKKKRKEEKWKKKKRRSDARSQEDPRDRSSPSAER
GTTAKQEPDTRGAKEGKVGEEMPTPPSLSPPVAGKASPLSGRSTSVGSSS
SSSSSSVSSEDEINGRAV back to topmRNA from alignment at CM002469.1:619119..621063- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6840 ID=rna6840|Name=rna6840|organism=Nannochloropsis gaditana|type=mRNA|length=1945bp|location=Sequence derived from alignment at CM002469.1:619119..621063- (Nannochloropsis gaditana)
AATTCATAATGTTGCACAACTGTCAGGAGTAATCAACGAGGGGTTGAGTT
GAAGTTTTGGACGGCCGTGTCGTAAGTATCTCCCTCTTTCCCAAGCTTAG
GTTTTCACAATCTATTCCTTTCTTCTCTACGTCTCATAAAATTCTTTCTT
CATATCCGTCTAATCAAGGTACTAAGGGCGCCGGGGCGGCACAACCAAGG
TGTATGCCATAAAGAGAGTAAAGCTCTGTGGAAACGCATGCGTCACGCAC
ATCGATGCTTTTGAGTGATACACACGGGTCAGCCTCTTACCTGCCTTGAA
TCCTGCGGCAGAATCGTTCATCGAAGCCAAGATCTTTCTATTGACGGCGT
TGCTGCGATGTCTTCTTGCCCTCAATGCTACGTGGGGCAATGCCGGAAAC
ACAAGGTTTCTTCCTCCCTCCCCTCTCTCCCTTCCTTCAAGCCCCCCTCC
CTCCTTTCGTTCCTCTTTCCCTCCTTCCCTTCACCTCGTCCTTATCTTTC
CTCCTCATTTCTCCGATCATCATGCATGTAGAAACGAGAAAGAGCACCCA
AAGAGGACGTCTCATCCGTTCTTAATATCGCCATCTCCCCTCGCATTCCG
CCCTTACTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTTCCTCT
GTCAGCTTCAAGACCACGGAGCCCGCGAACGTGCCCTTCTCTCATCTCGA
TCGGAGCTGCAAAGGCGTCTGTACGAGAGCCTGGTCCAACCGCATGTGGA
CACGTTGAAAACCACCAAAAAAGCCACGGCCGAGGCGGAGGCCGGTCACT
GCCGGTATCGAGACGCGGTTGGAAAAGACAGAGAGAAAGCCCAGAGGCAG
AAGTCCAAATTCAGCGAAGAGCAGGTTCGAAAAGTGAGTAAAAAGGGATG
GAGAGGGGGGGCGAGGATACAGTGTGTGAGGACCCCAGGGGTGTATGGCT
TGGTTAGGCAATAGGGTGCGGCTTCTACGCGTGGCCATACAGATGCGTGC
GCAGATGGGATTGCATGATTGAATTAGCTGGATCGCAAACAAAATTTTCT
CATCTGCGTTCTTAGGCACAGGCCCTTGGCGGCCTTCGCGGCGACCTTTT
GAGGACCATGCTGGCGAACGACAGCGATTTTGAGGACGGGGCGGAAGGGG
GGAAGGAGGGAAATACAGGCACGTCGGGAGAGCCGGCGGACAGGTAGGTG
GGGGTGGTGGAAAGGGAAATAATAGTGAGAGATGGGGTAAGTGGGCTGGG
AAGAGATGGCTTGGTTACGTATTGAATGGCCGTGTGTCTCGTTATCCACT
CTTGTTTTCCCGTAGGAAGAAAAAACGAAGACGGGAAGCTGCGGAGCGGG
AGGAGCGGAAAGCAAGGAAAAAGAAGAAGAAGGCGCTACGGAAAGAGGAG
GACAGGAAGAAGAAGAAGCGGAAGGAGGAGAAATGGAAGAAGAAAAAGAG
GAGGAGTGACGCCCGCAGCCAGGAAGATCCGAGGGACAGGTCAAGTCCAA
GTGCCGAAAGAGGAACGACAGCGAAGCAAGAGCCAGATACGCGGGGAGCC
AAGGAAGGGAAGGTTGGAGAGGAGATGCCCACGCCGCCTTCGCTCTCCCC
ACCCGTCGCAGGGAAGGCAAGCCCGCTCAGCGGTCGAAGCACGTCGGTCG
GTTCCTCATCGTCCTCTTCCTCATCGTCCGTATCCTCAGAGGATGAAATT
AACGGTCGGGCTGTATGAAGACTCAGGATGGTGGGAAGTGGAGGAACGGA
TGCTTCGCGCCATGTCAGCGGCGAAGAGACGGGCCTGAGGGGTTAAGAAG
GACAGCAGCGACGGCATTGCATGAAGGTCGGACCGACATATTGCACAAAG
CGGAGTAGGGGAATACATTTAAGAACTGGATATATCTACGATGTTGGAAA
GCGGGAGATAACTTCAAGTAAAGCACCATTCGAAGCAAGTGTTGA back to topCoding sequence (CDS) from alignment at CM002469.1:619119..621063- >rna6840 ID=rna6840|Name=rna6840|organism=Nannochloropsis gaditana|type=CDS|length=3228bp|location=Sequence derived from alignment at CM002469.1:619119..621063- (Nannochloropsis gaditana)
GAAGAAAAAACGAAGACGGGAAGCTGCGGAGCGGGAGGAGCGGAAAGCAA
GGAAAAAGAAGAAGAAGGCGCTACGGAAAGAGGAGGACAGGAAGAAGAAG
AAGCGGAAGGAGGAGAAATGGAAGAAGAAAAAGAGGAGGAGTGACGCCCG
CAGCCAGGAAGATCCGAGGGACAGGTCAAGTCCAAGTGCCGAAAGAGGAA
CGACAGCGAAGCAAGAGCCAGATACGCGGGGAGCCAAGGAAGGGAAGGTT
GGAGAGGAGATGCCCACGCCGCCTTCGCTCTCCCCACCCGTCGCAGGGAA
GGCAAGCCCGCTCAGCGGTCGAAGCACGTCGGTCGGTTCCTCATCGTCCT
CTTCCTCATCGTCCGTATCCTCAGAGGATGAAATTAACGGTCGGGCTGTA
TGAGCACAGGCCCTTGGCGGCCTTCGCGGCGACCTTTTGAGGACCATGCT
GGCGAACGACAGCGATTTTGAGGACGGGGCGGAAGGGGGGAAGGAGGGAA
ATACAGGCACGTCGGGAGAGCCGGCGGACAGCTTCAAGACCACGGAGCCC
GCGAACGTGCCCTTCTCTCATCTCGATCGGAGCTGCAAAGGCGTCTGTAC
GAGAGCCTGGTCCAACCGCATGTGGACACGTTGAAAACCACCAAAAAAGC
CACGGCCGAGGCGGAGGCCGGTCACTGCCGGTATCGAGACGCGGTTGGAA
AAGACAGAGAGAAAGCCCAGAGGCAGAAGTCCAAATTCAGCGAAGAGCAG
GTTCGAAAAATGTCTTCTTGCCCTCAATGCTACGTGGGGCAATGCCGGAA
ACACAAGGAAGAAAAAACGAAGACGGGAAGCTGCGGAGCGGGAGGAGCGG
AAAGCAAGGAAAAAGAAGAAGAAGGCGCTACGGAAAGAGGAGGACAGGAA
GAAGAAGAAGCGGAAGGAGGAGAAATGGAAGAAGAAAAAGAGGAGGAGTG
ACGCCCGCAGCCAGGAAGATCCGAGGGACAGGTCAAGTCCAAGTGCCGAA
AGAGGAACGACAGCGAAGCAAGAGCCAGATACGCGGGGAGCCAAGGAAGG
GAAGGTTGGAGAGGAGATGCCCACGCCGCCTTCGCTCTCCCCACCCGTCG
CAGGGAAGGCAAGCCCGCTCAGCGGTCGAAGCACGTCGGTCGGTTCCTCA
TCGTCCTCTTCCTCATCGTCCGTATCCTCAGAGGATGAAATTAACGGTCG
GGCTGTATGAGCACAGGCCCTTGGCGGCCTTCGCGGCGACCTTTTGAGGA
CCATGCTGGCGAACGACAGCGATTTTGAGGACGGGGCGGAAGGGGGGAAG
GAGGGAAATACAGGCACGTCGGGAGAGCCGGCGGACAGCTTCAAGACCAC
GGAGCCCGCGAACGTGCCCTTCTCTCATCTCGATCGGAGCTGCAAAGGCG
TCTGTACGAGAGCCTGGTCCAACCGCATGTGGACACGTTGAAAACCACCA
AAAAAGCCACGGCCGAGGCGGAGGCCGGTCACTGCCGGTATCGAGACGCG
GTTGGAAAAGACAGAGAGAAAGCCCAGAGGCAGAAGTCCAAATTCAGCGA
AGAGCAGGTTCGAAAAATGTCTTCTTGCCCTCAATGCTACGTGGGGCAAT
GCCGGAAACACAAGGAAGAAAAAACGAAGACGGGAAGCTGCGGAGCGGGA
GGAGCGGAAAGCAAGGAAAAAGAAGAAGAAGGCGCTACGGAAAGAGGAGG
ACAGGAAGAAGAAGAAGCGGAAGGAGGAGAAATGGAAGAAGAAAAAGAGG
AGGAGTGACGCCCGCAGCCAGGAAGATCCGAGGGACAGGTCAAGTCCAAG
TGCCGAAAGAGGAACGACAGCGAAGCAAGAGCCAGATACGCGGGGAGCCA
AGGAAGGGAAGGTTGGAGAGGAGATGCCCACGCCGCCTTCGCTCTCCCCA
CCCGTCGCAGGGAAGGCAAGCCCGCTCAGCGGTCGAAGCACGTCGGTCGG
TTCCTCATCGTCCTCTTCCTCATCGTCCGTATCCTCAGAGGATGAAATTA
ACGGTCGGGCTGTATGAGCACAGGCCCTTGGCGGCCTTCGCGGCGACCTT
TTGAGGACCATGCTGGCGAACGACAGCGATTTTGAGGACGGGGCGGAAGG
GGGGAAGGAGGGAAATACAGGCACGTCGGGAGAGCCGGCGGACAGCTTCA
AGACCACGGAGCCCGCGAACGTGCCCTTCTCTCATCTCGATCGGAGCTGC
AAAGGCGTCTGTACGAGAGCCTGGTCCAACCGCATGTGGACACGTTGAAA
ACCACCAAAAAAGCCACGGCCGAGGCGGAGGCCGGTCACTGCCGGTATCG
AGACGCGGTTGGAAAAGACAGAGAGAAAGCCCAGAGGCAGAAGTCCAAAT
TCAGCGAAGAGCAGGTTCGAAAAATGTCTTCTTGCCCTCAATGCTACGTG
GGGCAATGCCGGAAACACAAGGAAGAAAAAACGAAGACGGGAAGCTGCGG
AGCGGGAGGAGCGGAAAGCAAGGAAAAAGAAGAAGAAGGCGCTACGGAAA
GAGGAGGACAGGAAGAAGAAGAAGCGGAAGGAGGAGAAATGGAAGAAGAA
AAAGAGGAGGAGTGACGCCCGCAGCCAGGAAGATCCGAGGGACAGGTCAA
GTCCAAGTGCCGAAAGAGGAACGACAGCGAAGCAAGAGCCAGATACGCGG
GGAGCCAAGGAAGGGAAGGTTGGAGAGGAGATGCCCACGCCGCCTTCGCT
CTCCCCACCCGTCGCAGGGAAGGCAAGCCCGCTCAGCGGTCGAAGCACGT
CGGTCGGTTCCTCATCGTCCTCTTCCTCATCGTCCGTATCCTCAGAGGAT
GAAATTAACGGTCGGGCTGTATGAGCACAGGCCCTTGGCGGCCTTCGCGG
CGACCTTTTGAGGACCATGCTGGCGAACGACAGCGATTTTGAGGACGGGG
CGGAAGGGGGGAAGGAGGGAAATACAGGCACGTCGGGAGAGCCGGCGGAC
AGCTTCAAGACCACGGAGCCCGCGAACGTGCCCTTCTCTCATCTCGATCG
GAGCTGCAAAGGCGTCTGTACGAGAGCCTGGTCCAACCGCATGTGGACAC
GTTGAAAACCACCAAAAAAGCCACGGCCGAGGCGGAGGCCGGTCACTGCC
GGTATCGAGACGCGGTTGGAAAAGACAGAGAGAAAGCCCAGAGGCAGAAG
TCCAAATTCAGCGAAGAGCAGGTTCGAAAAATGTCTTCTTGCCCTCAATG
CTACGTGGGGCAATGCCGGAAACACAAG back to top
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