EWM23874.1, cds6809 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23874.1 vs. NCBI_GenBank
Match: gi|585105150|gb|EWM23874.1| (Adaptin ear-binding coat-associated protein 1 NECAP-1 [Nannochloropsis gaditana]) HSP 1 Score: 783.482 bits (2022), Expect = 0.000e+0 Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0 Query: 1 MRIFFFNKLPLYDRSPQENLGGRDAAKYSPSTVKILHAMASHAEEDAVERTLCQIRSVHVFKIPPRTSAGGYRASDWKDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPIKEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDEREQAFDFNVAIQEYEKDKEREERLRTGVGAGGVDSMGAGIPKRDLSLKEGEKISIKLPTRQGGERRPRGIGKESSGNGVLPPPPGSCRGGGGLLAPPPSTGSGGGKVYGGAAAHDDFFRGTGSLAAGPPPRKEDGTESSGPLPSVSAHRSPATPAPSGFPDDFGGFVAPSNPPSSSPSPAATRFPTAFPIPRAPVSGHGAGKSCPFDGLSALGDDLASQSAPWGAKSNTSNSDPFADLLPFK 390 MRIFFFNKLPLYDRSPQENLGGRDAAKYSPSTVKILHAMASHAEEDAVERTLCQIRSVHVFKIPPRTSAGGYRASDWKDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPIKEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDEREQAFDFNVAIQEYEKDKEREERLRTGVGAGGVDSMGAGIPKRDLSLKEGEKISIKLPTRQGGERRPRGIGKESSGNGVLPPPPGSCRGGGGLLAPPPSTGSGGGKVYGGAAAHDDFFRGTGSLAAGPPPRKEDGTESSGPLPSVSAHRSPATPAPSGFPDDFGGFVAPSNPPSSSPSPAATRFPTAFPIPRAPVSGHGAGKSCPFDGLSALGDDLASQSAPWGAKSNTSNSDPFADLLPFK Sbjct: 1 MRIFFFNKLPLYDRSPQENLGGRDAAKYSPSTVKILHAMASHAEEDAVERTLCQIRSVHVFKIPPRTSAGGYRASDWKDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPIKEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDEREQAFDFNVAIQEYEKDKEREERLRTGVGAGGVDSMGAGIPKRDLSLKEGEKISIKLPTRQGGERRPRGIGKESSGNGVLPPPPGSCRGGGGLLAPPPSTGSGGGKVYGGAAAHDDFFRGTGSLAAGPPPRKEDGTESSGPLPSVSAHRSPATPAPSGFPDDFGGFVAPSNPPSSSPSPAATRFPTAFPIPRAPVSGHGAGKSCPFDGLSALGDDLASQSAPWGAKSNTSNSDPFADLLPFK 390
BLAST of EWM23874.1 vs. NCBI_GenBank
Match: gi|553183333|ref|XP_005853878.1| (hypothetical protein NGA_0437400 [Nannochloropsis gaditana CCMP526] >gi|422295186|gb|EKU22485.1| hypothetical protein NGA_0437400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 235.343 bits (599), Expect = 1.035e-73 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 Query: 39 MASHAEEDAVERTLCQIRSVHVFKIPPRTSAGGYRASDWKDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPIKEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDER 149 MASHAEEDAVERTLCQIRSVHVFKIPPRTSAGGYRASDWKDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPIKEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDER Sbjct: 1 MASHAEEDAVERTLCQIRSVHVFKIPPRTSAGGYRASDWKDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPIKEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDER 111
BLAST of EWM23874.1 vs. NCBI_GenBank
Match: gi|219112201|ref|XP_002177852.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410737|gb|EEC50666.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 175.637 bits (444), Expect = 2.891e-50 Identity = 80/160 (50.00%), Postives = 113/160 (70.62%), Query Frame = 0 Query: 46 DAVERTLCQIRSVHVFKIPPRTSAGGYRASDWKDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPIKEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDEREQAFDFNVAIQEYEKDKEREERLRTGVGAGGVDSMGAGIPKRDLSLKEGEKISIKL 205 + +ER C I HVFK+PPR +AGG+R +DW EVWQG +K+V++G I+LTD T ++FA+ P+KEG+V+RCVDSSRYFVL+V+NAAG+H FIG+AF+ER AFDFN ++++ ++KE E G +G P +D S+K+GEKI I + Sbjct: 4 EVIERVRCVIPDAHVFKLPPRQTAGGWRGADWDQEVWQGTLKVVERGALTVILLTDKTTHAIFAVCPVKEGAVDRCVDSSRYFVLRVENAAGRHMFIGLAFNERNDAFDFNTSLEDSRREKEAEANPEEGTDSG---------PPKDYSMKDGEKIHISV 154
BLAST of EWM23874.1 vs. NCBI_GenBank
Match: gi|299116365|emb|CBN74630.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 178.718 bits (452), Expect = 1.211e-49 Identity = 106/261 (40.61%), Postives = 147/261 (56.32%), Query Frame = 0 Query: 39 MASHAEEDAVERTLCQIRSVHVFKIPPRTSAGGYRASDWKDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPIKEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDEREQAFDFNVAIQEYEKDKEREERLR-----TGVGAGGVDSMGAGIPKRDLSLKEGEKISIKLPTRQGGERRPRGIG--------KESSGNGVLPPP---PGSCRGGGGLLAPPPSTGSGGGKVYGGAAAHDDFFRGTGSLAAGPPPRKEDG 283 MA AE++ VE TL QI+ ++F++PPR A G+ A+D ++W G +++VQ+G +AAI+L D + G LFAM + +G+VER DSSRYFV+K+QNA G+HAF+G+AFD+R QAFDFNVA+QE++KD ER +L+ G G A PK DLSLK+GEKI I + GG G G SSG L G R L + + G + ++ FF G G+ P +K G Sbjct: 1 MAGLAEDEIVEHTLTQIQECYLFELPPRVRAQGWLAADMTKQMWTGRMRVVQRGQEAAIMLVDRRDGKLFAMCKVADGAVERVPDSSRYFVIKIQNAQGRHAFVGLAFDDRNQAFDFNVALQEFKKDIERSTKLKEDGQGGGDSGGDGGKAAAATPKVDLSLKQGEKIKISI----GGGSSKVGAGGVGMMEVVTSSSGGVALCAACALSGGYRTAAALCSREECSSCGRHNTHAHVLSYIPFFWGGGAREINPRVKKNVG 257
BLAST of EWM23874.1 vs. NCBI_GenBank
Match: gi|1210525688|dbj|GAX15551.1| (hypothetical protein FisN_6Hh151 [Fistulifera solaris]) HSP 1 Score: 174.866 bits (442), Expect = 2.841e-49 Identity = 81/167 (48.50%), Postives = 115/167 (68.86%), Query Frame = 0 Query: 39 MASHAEEDAVERTLCQIRSVHVFKIPPRTSAGGYRASDWKDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPIKEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDEREQAFDFNVAIQEYEKDKEREERLRTGVGAGGVDSMGAGIPKRDLSLKEGEKISIKL 205 + S + + +ER C I H+FK+PPR +AGG+R +DW EVWQG +K+V++G I+L DPK S+FA+ P+ +G+V+RCVDSSRYFVLKV+NA GKH F+G+AF+ER AFDFN A+++ ++KE E+ + + G PK D S+KEGEKI I + Sbjct: 18 LESLKDLEVIERVRCTIPDAHIFKLPPRPTAGGWRGADWDKEVWQGTLKVVERGDLTVILLVDPKKNSIFAVCPVSDGAVDRCVDSSRYFVLKVENADGKHLFVGMAFNERNDAFDFNTALEDARREKEVEQNMA---------KLDIGEPK-DYSIKEGEKIHISV 174
BLAST of EWM23874.1 vs. NCBI_GenBank
Match: gi|1210532042|dbj|GAX09470.1| (hypothetical protein FisN_6Lh151 [Fistulifera solaris]) HSP 1 Score: 169.474 bits (428), Expect = 2.610e-47 Identity = 79/167 (47.31%), Postives = 114/167 (68.26%), Query Frame = 0 Query: 39 MASHAEEDAVERTLCQIRSVHVFKIPPRTSAGGYRASDWKDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPIKEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDEREQAFDFNVAIQEYEKDKEREERLRTGVGAGGVDSMGAGIPKRDLSLKEGEKISIKL 205 + S + + +ER C I H+FK+PPR +AGG+R +DW EVWQG +K+V++G I+L D K S+FA+ P+ +G+V+RCVDSSRYFVLKV++A GKH F+G+AF+ER AFDFN A+++ ++KE E+ + + G PK D S+KEGEKI I + Sbjct: 18 LESLKDLEVIERVRCTIPDAHIFKLPPRPTAGGWRGADWDKEVWQGTLKVVERGDLTVILLLDSKNNSIFAVCPVSDGAVDRCVDSSRYFVLKVESADGKHLFVGMAFNERNDAFDFNTALEDARREKEVEQNMA---------KLDIGEPK-DYSIKEGEKIHISV 174
BLAST of EWM23874.1 vs. NCBI_GenBank
Match: gi|1072227648|gb|OEU12387.1| (DUF1681-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 170.244 bits (430), Expect = 4.707e-47 Identity = 75/172 (43.60%), Postives = 115/172 (66.86%), Query Frame = 0 Query: 39 MASHAEEDAVERTLCQIRSVHVFKIPPRTSAGGYRASDWKDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPIKEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDEREQAFDFNVAIQEYEKDKEREERLRTGVGAGGVDSMGAGIPKRDLSLKEGEKISIKLPTRQG 210 M S +D +ER C I+ HVFK+PPR ++GG+R +DW+DEVWQG VK+V++ ++L D +G +FA+ PIK+G+V+RCVDSSRYFVLK++N G+H F+GVAF+ER +FDFN ++++ ++ + + +P++D S+KEGEKI +K+ G Sbjct: 42 MKSLQNKDVIERVRCVIKDAHVFKLPPRPTSGGWRGADWRDEVWQGTVKVVERDEMTLVLLVDKVSGDVFAVCPIKDGAVDRCVDSSRYFVLKIENDNGRHMFVGVAFNERNDSFDFNTSLEDAKR--------ERAAAKAPIQNKIPNLPEKDYSIKEGEKIHVKIKNISG 205
BLAST of EWM23874.1 vs. NCBI_GenBank
Match: gi|1179510280|ref|XP_020677804.1| (uncharacterized protein At1g03900 [Dendrobium catenatum] >gi|1179510283|ref|XP_020677805.1| uncharacterized protein At1g03900 [Dendrobium catenatum]) HSP 1 Score: 160.999 bits (406), Expect = 3.453e-43 Identity = 108/289 (37.37%), Postives = 151/289 (52.25%), Query Frame = 0 Query: 41 SHAEEDAVERTLCQIRSVHVFKIPPRTSAGGYRASDW--KDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPI----KEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDEREQAFDFNVAIQEYEKDKEREERLRTGVGAGGVDSMGAGIPKRDLSLKEGEKISIKLPTRQGGERRPRGIGKESSGNGVLPP-----PPGSCRGGGGLLAPPPSTGSGGGKVYG------GAAAHDDFFRGTGSLAAGPPPRK-----EDGTESSGPLPSVSAHRSPATPAPSGF 307 S EE+A E TL +R V VFKIPPR+++GGY+ +W D++W G +++V G I L DP +G LFA + +E SVE +DSSRYFVLK+++ GKHAFIG+ F+ER +AFDFNVA+ ++EK RE + G G +S P + LKEGE I I + + K SSG G+L + + G LLAPPP SGGGK+ A G+ +L A R+ D ++ LPS ++ P + SG+ Sbjct: 2 SSIEEEAFEHTLLVVREVSVFKIPPRSTSGGYKCGEWLQSDKIWSGRLRVVSCGDRCEIRLEDPSSGELFAACFVLPGHRESSVETVLDSSRYFVLKIEDGRGKHAFIGLGFNERNEAFDFNVALSDHEKYLRREHE-KESDGVEGDESSIDIHPAVNHRLKEGETIRINVKS------------KPSSGTGMLSAAGMSGAASNTKKPGALLAPPP---SGGGKMRSPLPPPPNDPAVTKMHSGSSALMANESTRRSADPLSDLSQLERSLPSTNSTVHPTSTTSSGW 274
BLAST of EWM23874.1 vs. NCBI_GenBank
Match: gi|1175850817|ref|XP_020578978.1| (uncharacterized protein At1g03900 [Phalaenopsis equestris]) HSP 1 Score: 159.073 bits (401), Expect = 1.732e-42 Identity = 106/271 (39.11%), Postives = 144/271 (53.14%), Query Frame = 0 Query: 41 SHAEEDAVERTLCQIRSVHVFKIPPRTSAGGYRASDW--KDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPI----KEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDEREQAFDFNVAIQEYEKDKEREERLRTGVGAGGVDSMGAGIPKRDLSLKEGEKISIKLPTRQGGERRPRGIGKESSGNGVLPPP-----PGSCRGGGGLLAPPPSTGSGGGKVYG------GAAAHDDFFRGTGSLAAGPPPRKEDGTESSGPLPSVS 294 S EE+A E TL +R V VFKIPPR+++GGY+ +W D++W G +++V G I L DP TG LFA + +E SVE +DSSRYFVL++++ GKHAFIG+ F+ER +AFDFNVA+ ++EK +RE + G G +S P + LKEGE I I + + K SSG G+L S + G LL PPP SGG K+ A G+G+L A E T S+ PL +S Sbjct: 2 SSIEEEAFEHTLLVVREVSVFKIPPRSTSGGYKCGEWLQSDKIWSGRLRVVSCGDRCEIRLEDPSTGELFAACFVLPGQREISVETVLDSSRYFVLRIEDGRGKHAFIGLGFNERNEAFDFNVALSDHEKYSKREHE-KESDGVEGDESSIDIHPAVNHRLKEGETIRINVKS------------KPSSGTGMLSAAGMSGGASSTKKSGALLVPPP---SGGAKLRSPLPPPPNDPAVSRMHSGSGALVA-----NESTTSSADPLSDLS 251
BLAST of EWM23874.1 vs. NCBI_GenBank
Match: gi|661892599|emb|CDP03757.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 157.532 bits (397), Expect = 8.368e-42 Identity = 93/225 (41.33%), Postives = 126/225 (56.00%), Query Frame = 0 Query: 39 MASHAEEDAVERTLCQIRSVHVFKIPPRTSAGGYRASDW--KDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPI----KEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDEREQAFDFNVAIQEYEKDKEREERLRTG--VGAGGVDSMGAGIPKRDLSLKEGEKISIKLPTRQGGERRPRGIGKESSGNGVLPPP------PGSCRGGGGLLAPPPSTG 249 M+ +E++ E TL +R V V+KIPPR+++GGY+ +W D++W G +++V I L DP +G LFA I +E SVE +DSSRYFVLK+++ GKHAFIG+ F+ER +AFDFNVA+ ++EK RE TG G G DS P + LKEGE I I + K SSG G+L PG+ + LAPPPS G Sbjct: 1 MSFEDDEESFEHTLLVVREVSVYKIPPRSTSGGYKCGEWLQSDKIWSGRLRVVSCNTRCEIRLEDPNSGELFAACFINPGQRENSVEPALDSSRYFVLKIEDGTGKHAFIGLGFNERNEAFDFNVALSDHEKYVRREHEKETGGAAGEGSDDSHIDIHPAVNHRLKEGETIRINVKN------------KPSSGTGMLSAAGMSSGHPGTVKAKTLSLAPPPSGG 213 The following BLAST results are available for this feature:
BLAST of EWM23874.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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