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Properties
| Property Name | Value |
|---|
| Product | rna-binding la domain protein |
| Orig transcript id | gnl|cribi|Naga_100161g11.9657.mrna |
| Orig protein id | gnl|cribi|Naga_100161g11.9657 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:549990..551698 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6804 ID=rna6804|Name=rna6804|organism=Nannochloropsis gaditana|type=mRNA|length=2360bp
GCAAACCCGTGCCTTCATCCCCGTGCACACCGATCCGTGCCCATTTTTCC
TCATAGTGCCCTTGCATTTCGTCTGGGAACAGGCAAGGCATACATTTGTT
GGAGGGGTTGAGTTTTTCATCGTCAAGTTGCATCGACAATGGCCAAGCTC
GGTGTGGCGGTGGCCTCAATATCTGCCCTGTTGGGTTGCTTCAGTGTGCA
GGCCTTCATTCCCCAAACACCGTTGTCGGAGTTGGCCAGACATGGCAGAT
CTCGTCAGAGCTCCACGTCCAGGCTCGTCCCCTCTGCCAACTTCCTCGTC
GACTATCCCCCCCCAGGCGAGCGCCGTGATTACCCCCGTCCCAACCTGGA
AGAGACGTCGTCTTCCTTCAAAATCGCAGAGCAGCTCTCGGAGGAAATCA
AGAAGTTTCCCCGCCCGAAGGAAGGCAAGCCCACCGTGGTCATCGCGGGG
GCGGGTTTGGCGGGTCTGAGCACAGCCAAGTACCTGTGCGACGCGGGGTT
CAAGCCCATAGTCCTTGAAGCGCGCGACGTGCTCGGGGGTAAAGTCTCGG
CGTGGCAGGACAAGGATGGGGACTGGATTGAGACGGGGCTGCACATTTTC
TTCGGAGCTTACCCTAACATGATGCGCCTCTTCAAAGAGCTCAAGATCGA
AGAGCGCTTGCAATGGAAGAGCCATTCCATGATTTTCGCCATGCCAGGCA
AACAGGACGCGGAAGGCCGACAGCGCTTCTCCCGCTTCGACTTCCCATCG
TTCCTACCTGCGCCCTTCAACGGCATCCTGGCGATCCTCCTGAACGACGA
GATGCTCACCTGGCCTGAGAAGATCAAATTTGGCATTGGCCTCCTGCCTG
CCATTATCCAAGGGCAGGACTACGTGGAGAAGCAGGATTCGCTGTCCGTG
AAGCAGTGGATGAAGCAGCAAGGGGTTCCGGACCGCGTGAACGACGAGGT
CTTCATCGCCATGGCGAAGGCCCTCGCCTTCATCGACCCCGACCAGCTCT
CCATGACCATCGTGCTCACGGCGCTCAACCGCTTCCTCCAGGAGAAAGAC
GGGTCCAAGATGGCCTTTCTGGACGGCCCCCCCCCCACCCGCCTGTGCGA
GCCCATGGTGGAATACATCCGTCAAAACGGGGGAGAGGTGCACCTGAACG
CCCCCGTGCGGGAGATGATGCTGCACCGGGAGTTCCGGGAGAGCGTCGTG
GACGGTTTCCGGCTCCCGAATGGGACGATCGTTCAGGGAGACCTCTACGT
CTCCGCCATGCCCGTGGACCTGGTCAAGAAGGTGATCCCGAAGCGGATGA
AGGAGCGGTGGTCCTATTTCGACCAACTCGACGAGCTGGAGGGGGTTCCC
GTCATCAACATTCACCTCTGGTTCGACCGGAAACTGACCACCGTCGACCA
CCTCCTCTTCTCGCGCTCCCCCCTCCTGAGCGTGTACGCGGACATGTCCA
CCACCTGCAAGGGCTACCAGGACGACGAGAAGAGCATGCTGGAGCTGGTC
TTTGCCCCTGCCAAGGACTGGATCGGGAAATCCGACGAGGACATTGTGGC
CGCCACCATGGAGGAGCTCTACAGGCTTTTCCCCACCGAGCTCTCGGCGG
ATGGGAGCAAGGCGAAGCTGGTCAAGAGCGCAGTGGTGAAGACGCCGCGA
TCCGTGTACACGCCTCTGCCAGGAAAGGAGGCCTTCCGCCCCGATCAGAG
GACACCGGTGGGGAATTTCTATCTGGCAGGGGACTACACCAAGCAGATCT
ACTTGGGGTCTATGGAGGGGGCCACTTTGAGTGGGAAACTCTGTGCGCTG
AAGATCGCACAGGACGAGCAGGAGTGGGACGGTCGAAGTCAGGCGATGGA
TCTGATCGCGGAGGAGGAAAAGAGGGCAGGAAGGGCGGCGGAGGCGGCTA
TCAAGGTATAAAATTGGAAATCGCTGAGGCAGCACAGATACTGGAGATAT
TTTGCAATGGAAGTTTCCACTTAGAAAATGTGCTCGTCGTCGTCGCAAGG
AGTTTGGAAAGAAAGAGGAGGGGAAAAAAGAGGGAGAAGGCGCTAACAGC
ACGGAAGATTGGAGGCTTTCCGACTGTAACGAATGTGGAAGCATGAACGG
GCCTGTAGGTTTCAGCGATACGTAAACTGATATATGTCACAACAAAAAAT
TCTTATATAAGGGCGCTGTGAAATGTTTCTATTTCTTGTCTTTGCTGACT
TGGGAAAGCCAGTCAGTGTATGAGTCTGCCTACATCACCCGAGACAATCC
ATCACATGAGGTTAGAAGGCATGAGGTTATTGAATGTTCTCTAGACAGTC
TTCTCTTGCTTAGAGTTTTATCGAGTATATGTATTTTTAATGAAAAAAGC
TGCTTCATGA back to topprotein sequence of rna6804 >rna6804-protein ID=rna6804-protein|Name=rna6804|organism=Nannochloropsis gaditana|type=polypeptide|length=231bp
MTMNALEAREYLASMAVQQIEYYFSVDNLCRDTYLRAHLDEEGWVPLALI
CNFPTVASFAADYSEIVKTLQEASSVLEYDEANETLRLKEKATAWLLPNG
RGGMGCPRWLKQAPDTPPQESKLPPVVLPNPEAGGEKGEVAEKKADSEGP
RQPVTPVTPLCSLSFSSSAYSSSSSTTSPSTSQPESSDDDEDVDRSPSSS
SQREVDIQADGNSNTRKGEMGKRSVSVVKDV back to topmRNA from alignment at CM002469.1:549990..551698+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6804 ID=rna6804|Name=rna6804|organism=Nannochloropsis gaditana|type=mRNA|length=1709bp|location=Sequence derived from alignment at CM002469.1:549990..551698+ (Nannochloropsis gaditana)
CCCTACTCCTACCAGCAGCAGGCGGGCGCTTACTCCCCGCAGGCCCTTCC
GTCGCGCCAGCAGCAAGGCGTGTACTTTCCCCAACCGCAGCCACAGTACC
TGCCAGCTCACATTGGCACAGCGGTCCGGAGCAGTTTGATGACCATGAAT
GCGCTCGAGGCCCGCGAGTATTTGGCCTCCATGGCGGTGCAGCAGATCGA
GTACTATTTCTCGGTGGACAACCTTTGTCGCGATACTTACCTTCGTGCCC
AtctcgacgaggagggctggGTGCCCTTAGCGCTCATTTGCAATTTCCCC
ACCGTGGCCAGCTTTGCGGCCGACTACTCGGAGATCGTTAAAACGCTGCA
GgaggcctcctccgtcctcgagTACGACGAGGCGAACGAGACGCTGCGCC
TGAAAGAGAAGGCGACGGCCTGGCTCCTTCCCAACGGGCGCGGAGGCATG
GGTTGCCCTCGGTGGTTGAAACAAGCGCCCGACACGCCCCCGCAGGAATC
CAAGCTCCCTCCGGTCGTGCTCCCTAACCCCGAGGCCGGCGGCGAGAAGG
GTGAGGTTGCCGAGAAGAAGGCCGACAGCGAGGGCCCACGGCAACCCGTC
ACCCCCGTCACCCCTCTgtgctccctctccttttcttcctccgcgtactc
cagctcctcttccaccacgtcccccaGCACTTCTCAACCTGAGAGCAgcg
acgatgacgaggacgtggaccggagtccttcctcttcgtcgcaGAGGGAG
GTCGACATCCAAGCTGACGGCAACAGCAAtacgagaaagggagagatggg
aaAGCGCAGTGTCTCCGTCGTCAAGGATGTATGACCGAGGGTCGAAGATG
ATCTAActgatgacgaggagggatgaacAAGGCATTGGATGGTAGGTGAA
GAAGATAGCTAGGGATTTTCCGTGTATTTCGATAGTTTGAGGAAAGTTTA
AGATAATGGATGTAGCGCAGCAAGGTCCAGCAACAAAATCAACAAAAATT
AGGATAGAGTGTGGCATGTTGGGGAATGCTTACGAGAAGAGCGCGGCAGC
ACCGAGAGCATGCAGTAAGTAAGAGAAATACGATATTTACGACGTGAGCT
TTAGGGCCAAGAATAGGAAGATTGGCAGTGACGATGGCATGCTGATCGAC
ATCGGTTGACCCATGCCAGTACCAACGGAAAAGCTTGAAACAGGCCGCGA
GCGTCGCTTGTGGTGGTGAAGGCCGGCTTCGCTGCGTGGTTCTACACATA
CATAGTGCACCTGCACAGGAGAGGCGGGGTCCTGAGAGAGAGGACTGGCC
TCTAGAAGAGGGTGTAATATCCAGATGATGAACATTAAAAAAGGTGTGTC
AGGTGTCATCGGAGCATGGGATCAGTGGTTTTGGCGAAAAAAAATATAAG
ACGTATGTAAGTGTGACATGACAGAGACGAAAAATGGTAGAAGCAGGCTC
AGGACCCAGAGCGAGAATAGCAAAGATGACGTAAGTTTGGAAGGGTTATT
ACGAAAGATGAGGTTTAATATTGACGCTGAAATGATTGGCTTGATGGCAA
TGCAAAGAGATGTGCCACATAAGCATAGCAAATTGAGAATATGTCCTGCG
CCTGCAGCATCCAACACAGAAAAAAGCAGCAGAAAGACATGTGAGGACGT
TCCACACCGCAGTcagaaaaaaaacaaagaaTCGACAAATATTAGCATGT
CTCTTCTCC back to topCoding sequence (CDS) from alignment at CM002469.1:549990..551698+ >rna6804 ID=rna6804|Name=rna6804|organism=Nannochloropsis gaditana|type=CDS|length=696bp|location=Sequence derived from alignment at CM002469.1:549990..551698+ (Nannochloropsis gaditana)
ATGACCATGAATGCGCTCGAGGCCCGCGAGTATTTGGCCTCCATGGCGGT
GCAGCAGATCGAGTACTATTTCTCGGTGGACAACCTTTGTCGCGATACTT
ACCTTCGTGCCCAtctcgacgaggagggctggGTGCCCTTAGCGCTCATT
TGCAATTTCCCCACCGTGGCCAGCTTTGCGGCCGACTACTCGGAGATCGT
TAAAACGCTGCAGgaggcctcctccgtcctcgagTACGACGAGGCGAACG
AGACGCTGCGCCTGAAAGAGAAGGCGACGGCCTGGCTCCTTCCCAACGGG
CGCGGAGGCATGGGTTGCCCTCGGTGGTTGAAACAAGCGCCCGACACGCC
CCCGCAGGAATCCAAGCTCCCTCCGGTCGTGCTCCCTAACCCCGAGGCCG
GCGGCGAGAAGGGTGAGGTTGCCGAGAAGAAGGCCGACAGCGAGGGCCCA
CGGCAACCCGTCACCCCCGTCACCCCTCTgtgctccctctccttttcttc
ctccgcgtactccagctcctcttccaccacgtcccccaGCACTTCTCAAC
CTGAGAGCAgcgacgatgacgaggacgtggaccggagtccttcctcttcg
tcgcaGAGGGAGGTCGACATCCAAGCTGACGGCAACAGCAAtacgagaaa
gggagagatgggaaAGCGCAGTGTCTCCGTCGTCAAGGATGTATGA back to top
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