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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100027g18.162.mrna |
| Orig protein id | gnl|cribi|Naga_100027g18.162 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:321771..322851 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6712 ID=rna6712|Name=rna6712|organism=Nannochloropsis gaditana|type=mRNA|length=666bp
ATGTGCCAGAGCGGCCGACTGTTGGAAGTGCTGCGGAGCGCCCTCTGCTT
TCGGGACTCGGGCTCGCACATTCGCCGGTACGTCGTGCACCATGCCGTGC
AGCAGTATGTGGAGGAGCAGCAGGCGCAGCAAGAGCAGCTGCTTGAGCCT
GGAAGCATTTCGCAGGCAGGCGCGGAGGACATGGAAACGGAAGGGATGCG
GGGGGCGAAGCGGGCGGCCCTCCAGGCCTACGAGAGCCGGGCTGAGGACG
ACGAGGACGAGCTCTACGTCTTGAAGGGCACTTTTTCTTTGGCCAAGTGC
CTCGCCCTGCCCCCCGGAAAATTCATCCGTCGCTGTACGCGCGGTCCGAG
CATTGACATCTTTGCCAACGCCAAGCAGCCTTGGGGCTACCGAGACGTGC
TCTCGAAGGAATGGGGGGAAGTGGTGCGAGAGAGCAGTCCACACTTCGAC
CGACGAGCATATATACCCACATTGAACATCGACACGGAGAGTACGGACGG
ACGCGCTTCTCTGGGAAGAGGGTTGTATAGGTGGGGTCATCCCTGCAGCA
GCATGACTAAAGCTCGGTGGGGGTATGAAAGACCAAGACCAATGTGCGGA
ATGAGGGCAGAAGAAGAGGGAACAACCGGCGAACTGTACGGAGATTCCCA
CACCAAGAAATGGTGA back to topprotein sequence of rna6712 >rna6712-protein ID=rna6712-protein|Name=rna6712|organism=Nannochloropsis gaditana|type=polypeptide|length=330bp
MVKETSYRDVLRRAEHALELTASWSAPQFALVLGGEQAVPLAERTLAEYQ
NRYRSSLQGGGGEARLLSQQSLYVGAAFFLAAKKLKMTVDKKRLLNLSGA
QPHELSAVCASMQEFCADLVGTPAKNRRSLLSSTAPTSDLSTDRTRGTTP
AHGEGTEDHLLLSSREPAPPLRGLSLSRESSAHSSSSTSSHLPLLGSSGP
AQKRSRPNEANPCPRPGHLAGASPSPLELLSSRRAGKDEAIAGETQTCLK
RSTSASHRALSSTSAGPEANSSLATDMLRFRNEQDKAKYEEWKVSVRAAA
ANKERKNVKDVTMKNEMKESMGTAVGSAVA back to topmRNA from alignment at CM002469.1:321771..322851+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6712 ID=rna6712|Name=rna6712|organism=Nannochloropsis gaditana|type=mRNA|length=1081bp|location=Sequence derived from alignment at CM002469.1:321771..322851+ (Nannochloropsis gaditana)
ATGGTCAAGGAGACATCGTATCGGGACGTGCTCCGACGCGCGGAGCACGC
CTTGGAGTTGACCGCGTCATGGAGCGCGCCTCAATTCGCCCTCGTTTTAG
GGGGCGAGCAAGCTGTTCCGTTGGCTGAGCGCACTTTGGCGGAGTACCAG
AACCGCTACCGCTCCTCGCTgcagggtggaggcggtgaggCGCGGCTCTT
GTCTCAACAGTCGTTGTACGTTGGGGCCGCTTTTTTCCTCGCAGCGAAAA
AGCTGAAGGTAAGCCGGGTGCCTGGCTTTAAGGATATTTTCCCTTCAGAA
GGCGTGCACACAGTACAATAAGTATatgtcttctcctctcaTCCAGATGA
CGGTGGACAAGAAGCGGCTACTCAACCTAAGCGGCGCTCAGCCTCATGAA
CTTTCAGCAGTCTGCGCCTCCATGCAAGAGTTCTGCGCCGATCTCGTTGG
TACGCCTGCAAAAAATCGTCGATCCCTTCTCTCGAGCACCGCCCCGACGT
CCGACTTGTCCACTGACCGTACACGTGGCACGACCCCCGCCCACGGGGAA
GGGACTGAggatcatctcctcctttcaagTCGCGAGCCTGCGCCCCCGCT
GCGCGGTCTGTCTCTGTCCCGCGAGTCCTCAgcccattcctcttcctcca
cctcctcacaCCTGCCGTTGCTGGGATCCTCGGGCCCGGCACAGAAGCGG
TCCCGTCCTAACGAGGCCAACCCCTGTCCTCGACCCGGACATCTTGCAGG
AGCCTCGCCTTCACCTCTGGAGCTTTTATCGTCCAGAAGAGCGGGCAAGG
ACGAAGCGATTGCTGGCGAGACGCAAACGTGCTTGAAAAGAAGTACTTCA
GCTTCACATCgggctctttcctccactagtgcggggccggaggcaaACTC
CTCTCTAGCGACAGACATGCTCCGGTTTCGAAACGAGCAGGATAAGGCAA
AATATGAGGAATGGAAGGTTTCTGTGCGCGCGGCCGCTGCGAATAAAGAG
CGTAAAAACGTAAAGGATGTCACGATGAAGAACGAAATGAAAGAGAGCAT
GGGAACTGCAGTAGGAAGTGCTGTGGCATGA back to topCoding sequence (CDS) from alignment at CM002469.1:321771..322851+ >rna6712 ID=rna6712|Name=rna6712|organism=Nannochloropsis gaditana|type=CDS|length=1986bp|location=Sequence derived from alignment at CM002469.1:321771..322851+ (Nannochloropsis gaditana)
ATGGTCAAGGAGACATCGTATCGGGACGTGCTCCGACGCGCGGAGCACGC
CTTGGAGTTGACCGCGTCATGGAGCGCGCCTCAATTCGCCCTCGTTTTAG
GGGGCGAGCAAGCTGTTCCGTTGGCTGAGCGCACTTTGGCGGAGTACCAG
AACCGCTACCGCTCCTCGCTgcagggtggaggcggtgaggCGCGGCTCTT
GTCTCAACAGTCGTTGTACGTTGGGGCCGCTTTTTTCCTCGCAGCGAAAA
AGCTGAAGATGACGGTGGACAAGAAGCGGCTACTCAACCTAAGCGGCGCT
CAGCCTCATGAACTTTCAGCAGTCTGCGCCTCCATGCAAGAGTTCTGCGC
CGATCTCGTTGGTACGCCTGCAAAAAATCGTCGATCCCTTCTCTCGAGCA
CCGCCCCGACGTCCGACTTGTCCACTGACCGTACACGTGGCACGACCCCC
GCCCACGGGGAAGGGACTGAggatcatctcctcctttcaagTCGCGAGCC
TGCGCCCCCGCTGCGCGGTCTGTCTCTGTCCCGCGAGTCCTCAgcccatt
cctcttcctccacctcctcacaCCTGCCGTTGCTGGGATCCTCGGGCCCG
GCACAGAAGCGGTCCCGTCCTAACGAGGCCAACCCCTGTCCTCGACCCGG
ACATCTTGCAGGAGCCTCGCCTTCACCTCTGGAGCTTTTATCGTCCAGAA
GAGCGGGCAAGGACGAAGCGATTGCTGGCGAGACGCAAACGTGCTTGAAA
AGAAGTACTTCAGCTTCACATCgggctctttcctccactagtgcggggcc
ggaggcaaACTCCTCTCTAGCGACAGACATGCTCCGGTTTCGAAACGAGC
AGGATAAGGCAAAATATGAGGAATGGAAGGTTTCTGTGCGCGCGGCCGCT
GCGAATAAAGAGCGTAAAAACGTAAAGGATGTCACGATGAAGAACGAAAT
GAAAGAGAGCATGGGAACTGCAGTAGGAAGTGCTGTGGCATGAATGGTCA
AGGAGACATCGTATCGGGACGTGCTCCGACGCGCGGAGCACGCCTTGGAG
TTGACCGCGTCATGGAGCGCGCCTCAATTCGCCCTCGTTTTAGGGGGCGA
GCAAGCTGTTCCGTTGGCTGAGCGCACTTTGGCGGAGTACCAGAACCGCT
ACCGCTCCTCGCTgcagggtggaggcggtgaggCGCGGCTCTTGTCTCAA
CAGTCGTTGTACGTTGGGGCCGCTTTTTTCCTCGCAGCGAAAAAGCTGAA
GATGACGGTGGACAAGAAGCGGCTACTCAACCTAAGCGGCGCTCAGCCTC
ATGAACTTTCAGCAGTCTGCGCCTCCATGCAAGAGTTCTGCGCCGATCTC
GTTGGTACGCCTGCAAAAAATCGTCGATCCCTTCTCTCGAGCACCGCCCC
GACGTCCGACTTGTCCACTGACCGTACACGTGGCACGACCCCCGCCCACG
GGGAAGGGACTGAggatcatctcctcctttcaagTCGCGAGCCTGCGCCC
CCGCTGCGCGGTCTGTCTCTGTCCCGCGAGTCCTCAgcccattcctcttc
ctccacctcctcacaCCTGCCGTTGCTGGGATCCTCGGGCCCGGCACAGA
AGCGGTCCCGTCCTAACGAGGCCAACCCCTGTCCTCGACCCGGACATCTT
GCAGGAGCCTCGCCTTCACCTCTGGAGCTTTTATCGTCCAGAAGAGCGGG
CAAGGACGAAGCGATTGCTGGCGAGACGCAAACGTGCTTGAAAAGAAGTA
CTTCAGCTTCACATCgggctctttcctccactagtgcggggccggaggca
aACTCCTCTCTAGCGACAGACATGCTCCGGTTTCGAAACGAGCAGGATAA
GGCAAAATATGAGGAATGGAAGGTTTCTGTGCGCGCGGCCGCTGCGAATA
AAGAGCGTAAAAACGTAAAGGATGTCACGATGAAGAACGAAATGAAAGAG
AGCATGGGAACTGCAGTAGGAAGTGCTGTGGCATGA back to top
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