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Properties
| Property Name | Value |
|---|
| Product | endonuclease iii |
| Orig transcript id | gnl|cribi|Naga_100027g15.150.mrna |
| Orig protein id | gnl|cribi|Naga_100027g15.150 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:313620..315298 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6709 ID=rna6709|Name=rna6709|organism=Nannochloropsis gaditana|type=mRNA|length=1608bp
TTGTCCGTGATGGCGGCTATGGTAGAGAGCTCCCTCGCCAGGGGCACGGT
GACGTCTGTCAGCGAGCAACTTGAGCCTCGAGTGTTCCGGAGGAAGGCTG
GGCGGGCGAATTGAAAGGCACATTCCCACGACACACCACATTGCTCCACA
CAGATTTCATTCTTCAAGCTCAGTGCTACGTACATCTCGCGAGTCAGCAC
TCTATCAAAGCCGCAAGGAACATGCTGCGGCGCATCCTACCCGTCTGCCT
CCGTCCCCTCCCAGGTTTCACACGAGCCTTTGGCACTGTGCCTGTTGACC
TTCCTGAGCACCCACCGACCGTGAATGCCTCGACAGATAAGCAGCGCTAC
GATTGGCAGGACCCTTTGCTCTTACGAGCTCAACTGACAGAAGAGGAAGG
CATGATTCAGGACATGGCCCGTGCCTACTGTCAACAGAGCCTGCAACCCC
GCATCTTGCACGCAAACCGTCACGAGGAGTTCGACAGGAAGATTATGACC
GAGATGGGCGAGCTAGGATTGCTGGGGCCAACAATTCGAGGCTACGGATG
TTCCGGGGTAGGCTATGTAGCGTATGGCTTGATTGCCCGCGAGGTGGAGG
CTGTGGACAGCGCCTATCGTTCCGCTATGAGCGTGCAGTCGTCCCTGGTG
ATGCACCCCATCTACACGTTCGGCACTAAGGAACAAAAAGAAAAGTATCT
GCCAGGACTGGCCAAGGGCGCTCTGGTGGGCTGTTTCGGCCTGACGGAGC
CCAACCACGGGTCGGATCCGGGGGGCATGGAGACGAGGGCGCGGAAGCAG
CCGGACGGGGGCTACGTCCTGAGCGGCTCCAAGAACTGGATCACTAACTC
CCCGATAGCCGACGTCTTCGTGGTATGGGCGAAGGACGACGAGGGCGTGA
TTCGGGGTTTCGTGTTGGAGAGAGGGATGAAGGGATTGACAGCGCCCAAA
ATCGAAGGGAAGTTCTCTCTCCGGGCCTCGACCACAGGCATGATTGTGAT
GGACGACGTCGAGGTGCCGGCTAGTAACCTCCTGCCACTGGCTCGTGGGT
TGGGAGGGCCTTTCTCCTGCCTGAACAGTGCGCGGTACGGCATCTCCTGG
GGGAGCATGGGCGCGGCCGCCTTCTGCATGTCGACTGCCTTGGCGTACGT
TCTGGAGCGTAGTCAGTTCGGGGCCCCGCTAGCGAGCAATCAGCTCATAC
AAAGGAAACTGGCTGATATGGACACGGACATCGCTCTGGCGCTGCAAGGA
TCACTACGGGTGGGGAGGCTGCTCGACGAGGGGCGTGCGGTTCCCGAGAT
GGTCTCCTTGGTGAAGCGGAACAATTGCGGGAAGGCTTTGAACATTGCGA
GGAGCGCCCGGGACATGCTAGGAGGCAATGGCATATCGGACGAGTATCAC
GTCATTCGTCACATGATGAATTTGGAGGCTGTCAACACTTATGAAGGCAC
ACACGACGTACACGCCCTCATCCTCGGCCGCGCCATCACCGGAATCCCTG
CCTTTGTTCCTCGAAATAGTTATCCGAAGGCCCAAAAACGCGAGTCTTAA
TGTAAAATAAGTACCTCCCTAGGAACACCAAGAAGAATAAGGTTCTTGAT
CTTTCTGT back to topprotein sequence of rna6709 >rna6709-protein ID=rna6709-protein|Name=rna6709|organism=Nannochloropsis gaditana|type=polypeptide|length=374bp
MRFTTLNLVKFGGATICTINMFRSSLAFSPKIHVETRHVAPTLPIKPWPT
RWHQSLRKERRQRWFSSRGIALLSVEAAAEEESLAATTAVPSEDAAPVAR
GKKKNTLPDIAPCSTGHEGKKSGGAKSPRSKKAALPPFIPNPRWRDQLEI
IREMRKDATAPVDLFGCSELGRRKATSPEHMRFQTLISSMLSSQTTDLVN
EKAMGRLFDACGITIEGLEALGEEGIVQAIKPVSFYTAKAGNILKVCAIL
KTQYTGDIPRTFEELMQLPGVGPKMATLVCAYGWGEIVGICVDTHVHRIS
NRLGWANTWNFKNHKAQNPEKTRKLLESWMPKEHWKEVNPLLVGLGQQTC
RAIAPKCGDCKLAAVCPSYSASAE back to topmRNA from alignment at CM002469.1:313620..315298+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6709 ID=rna6709|Name=rna6709|organism=Nannochloropsis gaditana|type=mRNA|length=1679bp|location=Sequence derived from alignment at CM002469.1:313620..315298+ (Nannochloropsis gaditana)
ATGCGCTTTACGACACTGAACTTGGTAAAGTTTGGAGGCGCAACAATATG
CACTATAAATATGTTTCGAAGCAGGTGAGCAAAAAAGGCATTGATGGCGT
GGAAATTGAGTCCTTGGCTCGACTCATCGGCGCCTCACGACTCCGTTCCG
GCTACGCAGCCTTGCATTCTCTCCCAAGATCCACGTGGAAACCCGCCATG
TAGCCCCCACACTTCCCATCAAACCCTGGCCTACGCGTTGGCACCAATCT
TTGAGAAAAGAGCGGAGACAAAGATGGTTCTCTTCGCGTGGAATAGCGTT
GCTGTCAGTCGAGGCAGCAGCTGAAGAGGAATCCTTGGCTGCTACGACGG
CAGTGCCCTCCGAAGATGCTGCGCCCGTAGCCCGgggcaaaaagaaaaat
acaCTACCTGACATCGCACCTTGCTCTACAGGACATGAAGGTAAAAAGTC
AGGGGGTGCCAAATCACCGAGATCAAAAAAAGCTGCACTCCCCCCATTCA
TCCCCAACCCTCGCTGGCGCGATCAGCTCGAAATTATCCGTGAGATGCGC
AAAGACGCGACGGCTCCTGTAGACCTATTTGGATGCTCTGAGCTTGGAAG
ACGGAAAGCCACTTCTCCAGAGCACATGCGCTTCCAAACTTTGATCTCCT
CCATGCTAAGCAGCCAAACGACGGACCTCGTGAACGAGAAAGCTATGGGC
CGTCTGTTCGACGCGTGCGGGATCACTATCGAGGGCTTAGAGGcgttggg
agaggagggtatCGTACAGGCCATCAAGCCTGTTTCATTCTATACAGCAA
AGGCCGGCAACATTTTAAAAGTATGCGCGATTTTGAAGGTAAAAAGGTGG
CCAAAATTCTTAACCTTTCCGGGTGGCTTGCCAAACACTTGGGGGTCTCG
TGGTCGCTCAGTagtccccctcccatcaaCAGACGCAGTACACCGGCGAT
ATTCCGCGCACTTTTGAGGAACTCATGCAGCTACCTGGAGTCGGCCCCAA
GATGGCCACTCTCGTGTGTAGGTTGCTCCCGGGCTTGGTGCATCTGGTTG
CCTCGGTGGTCGTCCATGATACGAtgcgatggggaagagaTTGGAAACGA
GTTCCACGTTTTCCGAGTTGTTAGACACGACACATGCCATTTCTTTTCTG
AGTTTCATTTTGGTCACGTAAGGCGGCGCAATATCTCAGACATGTCATCG
ACCTTCCATCGTTGCAGGCGCTTATGGATGGGGTGAAATTGTAGGGATCT
GCGTCGACACACACGTACACCGCATCAGGTAGTCCTGGATTTGAGCGACT
GATTTTGAATTTGTAATAATGCCTCTCTTCAACCACATGTTTCCGTGcta
tcctcctctctgaAGCAACCGCTTAGGATGGGCCAACACGTGGAATTTCA
AGAACCACAAAGCTCAAAACCCGGAGAAGACTCGCAAGTTGCTGGAGTCT
TGGATGCCCAAGGAGCATTGGAAAGAAGTGAGTCTTTGTCAACATAAGGA
TCTTAAAAGGCACAAGTGACTCATCACAACTCGTTATTACGTCTCACAAC
CGCGTTCTTCCGTAGGTGAACCCTCTACTAGTGGGTTTGGGTCAGCAAAC
TTGTCGGGCTATCGCGCCCAAATGCGGGGACTGTAAGCTTGCGGCCGTAT
GTCCCTCCTACTCTGCATCAGCGGAATGA back to topCoding sequence (CDS) from alignment at CM002469.1:313620..315298+ >rna6709 ID=rna6709|Name=rna6709|organism=Nannochloropsis gaditana|type=CDS|length=6750bp|location=Sequence derived from alignment at CM002469.1:313620..315298+ (Nannochloropsis gaditana)
ATGCGCTTTACGACACTGAACTTGGTAAAGTTTGGAGGCGCAACAATATG
CACTATAAATATGTTTCGAAGCAGCCTTGCATTCTCTCCCAAGATCCACG
TGGAAACCCGCCATGTAGCCCCCACACTTCCCATCAAACCCTGGCCTACG
CGTTGGCACCAATCTTTGAGAAAAGAGCGGAGACAAAGATGGTTCTCTTC
GCGTGGAATAGCGTTGCTGTCAGTCGAGGCAGCAGCTGAAGAGGAATCCT
TGGCTGCTACGACGGCAGTGCCCTCCGAAGATGCTGCGCCCGTAGCCCGg
ggcaaaaagaaaaatacaCTACCTGACATCGCACCTTGCTCTACAGGACA
TGAAGGTAAAAAGTCAGGGGGTGCCAAATCACCGAGATCAAAAAAAGCTG
CACTCCCCCCATTCATCCCCAACCCTCGCTGGCGCGATCAGCTCGAAATT
ATCCGTGAGATGCGCAAAGACGCGACGGCTCCTGTAGACCTATTTGGATG
CTCTGAGCTTGGAAGACGGAAAGCCACTTCTCCAGAGCACATGCGCTTCC
AAACTTTGATCTCCTCCATGCTAAGCAGCCAAACGACGGACCTCGTGAAC
GAGAAAGCTATGGGCCGTCTGTTCGACGCGTGCGGGATCACTATCGAGGG
CTTAGAGGcgttgggagaggagggtatCGTACAGGCCATCAAGCCTGTTT
CATTCTATACAGCAAAGGCCGGCAACATTTTAAAAGTATGCGCGATTTTG
AAGACGCAGTACACCGGCGATATTCCGCGCACTTTTGAGGAACTCATGCA
GCTACCTGGAGTCGGCCCCAAGATGGCCACTCTCGTGTGCGCTTATGGAT
GGGGTGAAATTGTAGGGATCTGCGTCGACACACACGTACACCGCATCAGC
AACCGCTTAGGATGGGCCAACACGTGGAATTTCAAGAACCACAAAGCTCA
AAACCCGGAGAAGACTCGCAAGTTGCTGGAGTCTTGGATGCCCAAGGAGC
ATTGGAAAGAAGTGAACCCTCTACTAGTGGGTTTGGGTCAGCAAACTTGT
CGGGCTATCGCGCCCAAATGCGGGGACTGTAAGCTTGCGGCCGTATGTCC
CTCCTACTCTGCATCAGCGGAATGAATGCGCTTTACGACACTGAACTTGG
TAAAGTTTGGAGGCGCAACAATATGCACTATAAATATGTTTCGAAGCAGC
CTTGCATTCTCTCCCAAGATCCACGTGGAAACCCGCCATGTAGCCCCCAC
ACTTCCCATCAAACCCTGGCCTACGCGTTGGCACCAATCTTTGAGAAAAG
AGCGGAGACAAAGATGGTTCTCTTCGCGTGGAATAGCGTTGCTGTCAGTC
GAGGCAGCAGCTGAAGAGGAATCCTTGGCTGCTACGACGGCAGTGCCCTC
CGAAGATGCTGCGCCCGTAGCCCGgggcaaaaagaaaaatacaCTACCTG
ACATCGCACCTTGCTCTACAGGACATGAAGGTAAAAAGTCAGGGGGTGCC
AAATCACCGAGATCAAAAAAAGCTGCACTCCCCCCATTCATCCCCAACCC
TCGCTGGCGCGATCAGCTCGAAATTATCCGTGAGATGCGCAAAGACGCGA
CGGCTCCTGTAGACCTATTTGGATGCTCTGAGCTTGGAAGACGGAAAGCC
ACTTCTCCAGAGCACATGCGCTTCCAAACTTTGATCTCCTCCATGCTAAG
CAGCCAAACGACGGACCTCGTGAACGAGAAAGCTATGGGCCGTCTGTTCG
ACGCGTGCGGGATCACTATCGAGGGCTTAGAGGcgttgggagaggagggt
atCGTACAGGCCATCAAGCCTGTTTCATTCTATACAGCAAAGGCCGGCAA
CATTTTAAAAGTATGCGCGATTTTGAAGACGCAGTACACCGGCGATATTC
CGCGCACTTTTGAGGAACTCATGCAGCTACCTGGAGTCGGCCCCAAGATG
GCCACTCTCGTGTGCGCTTATGGATGGGGTGAAATTGTAGGGATCTGCGT
CGACACACACGTACACCGCATCAGCAACCGCTTAGGATGGGCCAACACGT
GGAATTTCAAGAACCACAAAGCTCAAAACCCGGAGAAGACTCGCAAGTTG
CTGGAGTCTTGGATGCCCAAGGAGCATTGGAAAGAAGTGAACCCTCTACT
AGTGGGTTTGGGTCAGCAAACTTGTCGGGCTATCGCGCCCAAATGCGGGG
ACTGTAAGCTTGCGGCCGTATGTCCCTCCTACTCTGCATCAGCGGAATGA
ATGCGCTTTACGACACTGAACTTGGTAAAGTTTGGAGGCGCAACAATATG
CACTATAAATATGTTTCGAAGCAGCCTTGCATTCTCTCCCAAGATCCACG
TGGAAACCCGCCATGTAGCCCCCACACTTCCCATCAAACCCTGGCCTACG
CGTTGGCACCAATCTTTGAGAAAAGAGCGGAGACAAAGATGGTTCTCTTC
GCGTGGAATAGCGTTGCTGTCAGTCGAGGCAGCAGCTGAAGAGGAATCCT
TGGCTGCTACGACGGCAGTGCCCTCCGAAGATGCTGCGCCCGTAGCCCGg
ggcaaaaagaaaaatacaCTACCTGACATCGCACCTTGCTCTACAGGACA
TGAAGGTAAAAAGTCAGGGGGTGCCAAATCACCGAGATCAAAAAAAGCTG
CACTCCCCCCATTCATCCCCAACCCTCGCTGGCGCGATCAGCTCGAAATT
ATCCGTGAGATGCGCAAAGACGCGACGGCTCCTGTAGACCTATTTGGATG
CTCTGAGCTTGGAAGACGGAAAGCCACTTCTCCAGAGCACATGCGCTTCC
AAACTTTGATCTCCTCCATGCTAAGCAGCCAAACGACGGACCTCGTGAAC
GAGAAAGCTATGGGCCGTCTGTTCGACGCGTGCGGGATCACTATCGAGGG
CTTAGAGGcgttgggagaggagggtatCGTACAGGCCATCAAGCCTGTTT
CATTCTATACAGCAAAGGCCGGCAACATTTTAAAAGTATGCGCGATTTTG
AAGACGCAGTACACCGGCGATATTCCGCGCACTTTTGAGGAACTCATGCA
GCTACCTGGAGTCGGCCCCAAGATGGCCACTCTCGTGTGCGCTTATGGAT
GGGGTGAAATTGTAGGGATCTGCGTCGACACACACGTACACCGCATCAGC
AACCGCTTAGGATGGGCCAACACGTGGAATTTCAAGAACCACAAAGCTCA
AAACCCGGAGAAGACTCGCAAGTTGCTGGAGTCTTGGATGCCCAAGGAGC
ATTGGAAAGAAGTGAACCCTCTACTAGTGGGTTTGGGTCAGCAAACTTGT
CGGGCTATCGCGCCCAAATGCGGGGACTGTAAGCTTGCGGCCGTATGTCC
CTCCTACTCTGCATCAGCGGAATGAATGCGCTTTACGACACTGAACTTGG
TAAAGTTTGGAGGCGCAACAATATGCACTATAAATATGTTTCGAAGCAGC
CTTGCATTCTCTCCCAAGATCCACGTGGAAACCCGCCATGTAGCCCCCAC
ACTTCCCATCAAACCCTGGCCTACGCGTTGGCACCAATCTTTGAGAAAAG
AGCGGAGACAAAGATGGTTCTCTTCGCGTGGAATAGCGTTGCTGTCAGTC
GAGGCAGCAGCTGAAGAGGAATCCTTGGCTGCTACGACGGCAGTGCCCTC
CGAAGATGCTGCGCCCGTAGCCCGgggcaaaaagaaaaatacaCTACCTG
ACATCGCACCTTGCTCTACAGGACATGAAGGTAAAAAGTCAGGGGGTGCC
AAATCACCGAGATCAAAAAAAGCTGCACTCCCCCCATTCATCCCCAACCC
TCGCTGGCGCGATCAGCTCGAAATTATCCGTGAGATGCGCAAAGACGCGA
CGGCTCCTGTAGACCTATTTGGATGCTCTGAGCTTGGAAGACGGAAAGCC
ACTTCTCCAGAGCACATGCGCTTCCAAACTTTGATCTCCTCCATGCTAAG
CAGCCAAACGACGGACCTCGTGAACGAGAAAGCTATGGGCCGTCTGTTCG
ACGCGTGCGGGATCACTATCGAGGGCTTAGAGGcgttgggagaggagggt
atCGTACAGGCCATCAAGCCTGTTTCATTCTATACAGCAAAGGCCGGCAA
CATTTTAAAAGTATGCGCGATTTTGAAGACGCAGTACACCGGCGATATTC
CGCGCACTTTTGAGGAACTCATGCAGCTACCTGGAGTCGGCCCCAAGATG
GCCACTCTCGTGTGCGCTTATGGATGGGGTGAAATTGTAGGGATCTGCGT
CGACACACACGTACACCGCATCAGCAACCGCTTAGGATGGGCCAACACGT
GGAATTTCAAGAACCACAAAGCTCAAAACCCGGAGAAGACTCGCAAGTTG
CTGGAGTCTTGGATGCCCAAGGAGCATTGGAAAGAAGTGAACCCTCTACT
AGTGGGTTTGGGTCAGCAAACTTGTCGGGCTATCGCGCCCAAATGCGGGG
ACTGTAAGCTTGCGGCCGTATGTCCCTCCTACTCTGCATCAGCGGAATGA
ATGCGCTTTACGACACTGAACTTGGTAAAGTTTGGAGGCGCAACAATATG
CACTATAAATATGTTTCGAAGCAGCCTTGCATTCTCTCCCAAGATCCACG
TGGAAACCCGCCATGTAGCCCCCACACTTCCCATCAAACCCTGGCCTACG
CGTTGGCACCAATCTTTGAGAAAAGAGCGGAGACAAAGATGGTTCTCTTC
GCGTGGAATAGCGTTGCTGTCAGTCGAGGCAGCAGCTGAAGAGGAATCCT
TGGCTGCTACGACGGCAGTGCCCTCCGAAGATGCTGCGCCCGTAGCCCGg
ggcaaaaagaaaaatacaCTACCTGACATCGCACCTTGCTCTACAGGACA
TGAAGGTAAAAAGTCAGGGGGTGCCAAATCACCGAGATCAAAAAAAGCTG
CACTCCCCCCATTCATCCCCAACCCTCGCTGGCGCGATCAGCTCGAAATT
ATCCGTGAGATGCGCAAAGACGCGACGGCTCCTGTAGACCTATTTGGATG
CTCTGAGCTTGGAAGACGGAAAGCCACTTCTCCAGAGCACATGCGCTTCC
AAACTTTGATCTCCTCCATGCTAAGCAGCCAAACGACGGACCTCGTGAAC
GAGAAAGCTATGGGCCGTCTGTTCGACGCGTGCGGGATCACTATCGAGGG
CTTAGAGGcgttgggagaggagggtatCGTACAGGCCATCAAGCCTGTTT
CATTCTATACAGCAAAGGCCGGCAACATTTTAAAAGTATGCGCGATTTTG
AAGACGCAGTACACCGGCGATATTCCGCGCACTTTTGAGGAACTCATGCA
GCTACCTGGAGTCGGCCCCAAGATGGCCACTCTCGTGTGCGCTTATGGAT
GGGGTGAAATTGTAGGGATCTGCGTCGACACACACGTACACCGCATCAGC
AACCGCTTAGGATGGGCCAACACGTGGAATTTCAAGAACCACAAAGCTCA
AAACCCGGAGAAGACTCGCAAGTTGCTGGAGTCTTGGATGCCCAAGGAGC
ATTGGAAAGAAGTGAACCCTCTACTAGTGGGTTTGGGTCAGCAAACTTGT
CGGGCTATCGCGCCCAAATGCGGGGACTGTAAGCTTGCGGCCGTATGTCC
CTCCTACTCTGCATCAGCGGAATGAATGCGCTTTACGACACTGAACTTGG
TAAAGTTTGGAGGCGCAACAATATGCACTATAAATATGTTTCGAAGCAGC
CTTGCATTCTCTCCCAAGATCCACGTGGAAACCCGCCATGTAGCCCCCAC
ACTTCCCATCAAACCCTGGCCTACGCGTTGGCACCAATCTTTGAGAAAAG
AGCGGAGACAAAGATGGTTCTCTTCGCGTGGAATAGCGTTGCTGTCAGTC
GAGGCAGCAGCTGAAGAGGAATCCTTGGCTGCTACGACGGCAGTGCCCTC
CGAAGATGCTGCGCCCGTAGCCCGgggcaaaaagaaaaatacaCTACCTG
ACATCGCACCTTGCTCTACAGGACATGAAGGTAAAAAGTCAGGGGGTGCC
AAATCACCGAGATCAAAAAAAGCTGCACTCCCCCCATTCATCCCCAACCC
TCGCTGGCGCGATCAGCTCGAAATTATCCGTGAGATGCGCAAAGACGCGA
CGGCTCCTGTAGACCTATTTGGATGCTCTGAGCTTGGAAGACGGAAAGCC
ACTTCTCCAGAGCACATGCGCTTCCAAACTTTGATCTCCTCCATGCTAAG
CAGCCAAACGACGGACCTCGTGAACGAGAAAGCTATGGGCCGTCTGTTCG
ACGCGTGCGGGATCACTATCGAGGGCTTAGAGGcgttgggagaggagggt
atCGTACAGGCCATCAAGCCTGTTTCATTCTATACAGCAAAGGCCGGCAA
CATTTTAAAAGTATGCGCGATTTTGAAGACGCAGTACACCGGCGATATTC
CGCGCACTTTTGAGGAACTCATGCAGCTACCTGGAGTCGGCCCCAAGATG
GCCACTCTCGTGTGCGCTTATGGATGGGGTGAAATTGTAGGGATCTGCGT
CGACACACACGTACACCGCATCAGCAACCGCTTAGGATGGGCCAACACGT
GGAATTTCAAGAACCACAAAGCTCAAAACCCGGAGAAGACTCGCAAGTTG
CTGGAGTCTTGGATGCCCAAGGAGCATTGGAAAGAAGTGAACCCTCTACT
AGTGGGTTTGGGTCAGCAAACTTGTCGGGCTATCGCGCCCAAATGCGGGG
ACTGTAAGCTTGCGGCCGTATGTCCCTCCTACTCTGCATCAGCGGAATGA back to top
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