rna6707, rna6707 (mRNA) Nannochloropsis gaditana

Overview
Namerna6707
Unique Namerna6707
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2735
Alignment locationCM002469.1:310182..311376 -

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Properties
Property NameValue
Productglutathione peroxidase
Orig transcript idgnl|cribi|Naga_100027g13.148.mrna
Orig protein idgnl|cribi|Naga_100027g13.148
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:310182..311376 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100027g13gene6485Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6707rna6707-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23970.1cds6691Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6707 ID=rna6707|Name=rna6707|organism=Nannochloropsis gaditana|type=mRNA|length=2735bp
AGATTATGGCCTTGGCGTAGCTCTCAACCTGTTTTTCCTCACCGATGACA
AAGACTACACTTCACAGCCGGCAGGTGTCCCGTCTTTACGGTCGCACAGG
GGGTTTTAAGCGTGATTCGAGGGCAGAAGAGACGAGATCGCCGCTGCCTC
GCTAAATTTTCACGTTTTCACTGCGACGCCCACTATGCTCCCTCGAGCCC
GTCAAGCTAGCATCGCCCTGACCTTGCTCGTAGGGGTAATAATCCCATTC
AGCGCTCTCACAGAGTATGACGGGATTCATTTGGGAAAAGGTCTCCTCAA
GGAGGTGACTCAGGCCCCCTGTGTTCGGCTTTTTAGCTCGCAAGGCACCG
TAGGCTGCCGAACTCGGAGTCGTGAGGGAGCAACTGCCCCTTTATACTAC
CTCAGCGGATTTGGGGAGGATGACCAACACGAGTATATGAATCTTGAGGA
GGGGGTTGCTGTGGTTATGCCCGCAAGCATGCTAAATTCTACCGTGCTCG
AGTTTTTGAAAGCTCAGTCCCCAGCACGCACCCGAGGAGTCATCGTACTA
GAAGAATCCAAAGATATGGCCGCAGATTTCGAGCGAGACTCCGTTTCTCC
GGATGTTTCCACGCCACAAGGCGATGGTACACCCAGTGCAGCCTTTACCG
TTGGACCAGATCACGCCTGGAACCCCCGGGGAAGCGGGCTGCTCAATCAA
AAGCACGACTTCCCCGTCGTCTTGGCGAGCGTTGATGGCGATAGCACAGG
GGTTGGGGCCGCTCAGGTCAAAGCATGGGCGCAACATAACGGTGGATTAC
GTCGTGCTGGACCACTGCCCCGTTACAAAGCCAAGTTCGACTTCTACTTC
GGCCCTGACTCCCCGTCGACTCGGGCGGAATCAGATTTGACGTCGGCCGA
CTGTTTGTCCTGGAGGGATGTGGCAGGCAACCCTGCCCCCCAGTGCCTGC
CTATAGGGGGGCAAAGCGTCTGGGGAACGTTCGGTGGGCGGACGGGCCTG
CAGACGAAGCCAAGTGTGCTTCTTACAACAGCCATGGACGGCCTGTCTTT
CTTTCATGAGAGGACCCCTGCGGCGAACGAGGCAGTGGCCTCCATCCTCA
CCCTCCTCGCGGCTACAAGTGCCCTTAAAAATGCTTCACGCGCTGGAGCC
TTGGACCTGGATGCGGCACCCTATAACCTGGCCGTCGCCTTCTTCCAAGC
CGACGAATGGGGCTTTGCGGGGTCGCGCCGCTTCGCGCGGGATATCAGCC
CTGGGGGTGTCGACTGCCCGGCCACGGTTCCCGACAACAGCTCGCGGGAC
GGGTCCGGCGCCTGTGTGGGGTCGGACGGCGTCTACCCGTCCATGGCCTT
CAAAGACCTGGCGGAGAAGGGTTTCGTCCACGTGCTGGCTGTCGATCAAG
TGGGGGTGCTGGGCACCGGCGGGCAAGCAGGCTCGCTCCCTCTCACCGCC
CTTTACGACAAGACCCCGCCGACGGCCGTACTGGACGCCATCGACAGGGC
CGCCGCCTCCATGGCCCCTTCACAGGCCGTCATGGTCACGTCTTTGGACG
GATCGGGAGCGTTGCCCCCCTCTCCCTTCACTTCCTTCGCCCGCGGGACC
CCGGCACTGAGCGGCGCCATCCTGACGGGCTACGGGGAGACCTTCATAGA
CCCGCGTTACCACTCCCATGAGGACACGGCGGCAGTCCTCGACCCGACGG
CCCTCTCCTCCGTCGCCGCCCTCGTCGCTCGCGCCTTTTGGAAGCTGGCA
GCCGGTCCGGGCGAAGGCGCTGCGTCAGCCGCGGAGCTCGAGGCTATCGG
AGTCGAACCTGCCTTTGTCTCCGACCTGTTGGATTGCCTGACCCGGGATT
GGGACTGTCCAGCCATGAAAGCTTTTCGCGACTCAGAAATCTCAAACCTC
AAAGACTACTTGCAGATGTCGTACCTGTACACCCCCCCTGTCCCGCGCCC
CCCCACATACTACGCGGGCGTGCTTGCTCCCTATCAGGGTCTGCCCTTGG
TCCAGCACCTAGACAAGAGCTCCCACGCGGAGGGTGTCGACACCGGCATT
TATGCCGCCTGGCCTGCAGGACAAGTCTTCCCCGTGGGGGCCCACGACAA
AGCCTACGTGGTCCCGAAGCCTCTGGAGGCCTTCCTGCGGGCCTGGCTGG
GGCACACCCTGGGACAGGGCGGGGAGGATGCCCCCGTCGCTTGTCAAGGT
CCTTCCGACTGCAGCGACCTGACGTGCGACGCGGGCCTCTCCACGCGCGA
GTGCGTCCTCGACGCCTGCGTTTGCCGCACCGCCGCCTTCTACCACACAG
CCCTCGACCCCGGGCTTGCCCCGCTCCCCGAGCCGGGTCTCTTCGCGGTC
TCGGACCCGGCGGCTCCCAACTGGGCGGAGCCGAACTGGGAGGACATCGG
TTTGGCCGTCTTTCCTGACGCGGGCTCGCGCATGGAGGCTACAGCCCTGG
GAGTGGGCGTGGGGGTGGCGGCCTTGAGCGTGGTGGGTGCTTTGGTGCTT
CAGCGGTCCTTGATCAAACATCACTACTTCGATTGAGGGATGGACTCTGG
CGGCATGACTGCAACCGAAGGGAGGCGTGGTCCAGTCGTGTAAGGATCAT
TGTGTACAGAGATGCAAAGCCTTGAAAGAAAATGACAACAAAGCACGCCT
GTGAAAAACCTGTAACTTCGTGCTCTTGCTTTTGAAATATTAGCGGTGGA
ACCACCGCGCCTGCCCGAGTGAGTCGTCGCTGTGT
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protein sequence of rna6707

>rna6707-protein ID=rna6707-protein|Name=rna6707|organism=Nannochloropsis gaditana|type=polypeptide|length=201bp
MLSGLFSSKPTCLAFKVLFLTSLASSSAFALPRTLYDFSLKDGTGKTQSL
SVYKDKPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEF
GGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKD
SSSSSADIRWNFTKFLLVNGLPVKRFAHNQAPNDFEGEILQALRDAASKE
L
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mRNA from alignment at CM002469.1:310182..311376-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6707 ID=rna6707|Name=rna6707|organism=Nannochloropsis gaditana|type=mRNA|length=1195bp|location=Sequence derived from alignment at CM002469.1:310182..311376- (Nannochloropsis gaditana)
TCTACAGGTCGGAGATATTTCCCTCTTCATGTTGTCGGGTCTGTTTTCTT CGAAGCCCACGTGCCTGGCCTTCAAGGTCTTATTTCTGACATCGTTGGCA TCTTCGTCAGCATTCGCTTTGCCGCGCACGCTTTACGATTTCAGCTTGAA AGATGGCACGGGGAAAACTCAGAGCTTGTCCGTCTACAAAGATAAGCCAG TCGTGTTAATGTACGTGAAATGGATCGGGTCGGTGTCATGAGAAAGGATC CACATGTCAGCTTACTATGAAGCCGCCCGCCCCCTTCCATTCATGAGCAG TGTTAATGTGGCGAGTAGATGCGGGTACACGGACTCAAACTATCGACAGC TTCAAGTGTTACAGGAAAAGTACGGGGATGACGGGCTGCAGGTCTTGGCC ATGCCCAGCAACGAGTTCGGAGGTCAGCACCAGAAGGAACGGGGAGGGAG TGGCAACCATGTTGTTCTGTAACGTAGATCAATTACTCTCACCACCTGTG GTTGAGCCAGTGCCTCTTCATGCATTACACTCTTCTATTGGCAATAGCAC ACGTGAACATTTCTCTATTCCTGAAGCTCGAGGCGGGTCCCCGACACCAC TTGATGTCCTCCTGCACGTGTCTCACACCCCCGAACCTCCAGGCCAGGAA CCCGGGTCGGACGCGGAAATCCTCAAGTTTACGAAAGAGAAGTATGCGGT CACCTTCCCTGTATTTAGCAAGCTGCTAGTCAACGGACCTCAGGCCTCGG ACCTCTACAAATGGCTGAAGGCGGAGACCCCCAAGGACTCCTCGTCATCC AGCGCCGACATCCGCTGGAATTTCACCAAGGTGCGCTCGCCCGATGACGT GCCTCGGCGTTTAAGGGTCGCTTAGGCTGTACCTCGATGTGTGCCTGTGG TTCACGAGGCTTGCGTTAGTAGCTCAATTCACTTTATTCTAATTCGATAC CATCGACCTCGCTTTCCCTCCTCTCCTAGTTCTTGCTCGTCAACGGTCTG CCCGTGAAGCGCTTCGCCCACAACCAAGCCCCGAACGACTTCGAAGGCGA GATCCTCCAGGCGCTGCGTGATGCGGCATCCAAGGAACTCTAGGGAAGAA GAGGCCCGCGTTCTTACACAGCGACGACTCACTCGGGCAGGCGCGGTGGT TCCACCGCTAATATTTCAAAAGCAAGAGCACGAAGTTACAGGTTT
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Coding sequence (CDS) from alignment at CM002469.1:310182..311376-

>rna6707 ID=rna6707|Name=rna6707|organism=Nannochloropsis gaditana|type=CDS|length=2424bp|location=Sequence derived from alignment at CM002469.1:310182..311376- (Nannochloropsis gaditana)
TTCTTGCTCGTCAACGGTCTGCCCGTGAAGCGCTTCGCCCACAACCAAGC
CCCGAACGACTTCGAAGGCGAGATCCTCCAGGCGCTGCGTGATGCGGCAT
CCAAGGAACTCTAGGCCAGGAACCCGGGTCGGACGCGGAAATCCTCAAGT
TTACGAAAGAGAAGTATGCGGTCACCTTCCCTGTATTTAGCAAGCTGCTA
GTCAACGGACCTCAGGCCTCGGACCTCTACAAATGGCTGAAGGCGGAGAC
CCCCAAGGACTCCTCGTCATCCAGCGCCGACATCCGCTGGAATTTCACCA
AGTGTTAATGTGGCGAGTAGATGCGGGTACACGGACTCAAACTATCGACA
GCTTCAAGTGTTACAGGAAAAGTACGGGGATGACGGGCTGCAGGTCTTGG
CCATGCCCAGCAACGAGTTCGGAGATGTTGTCGGGTCTGTTTTCTTCGAA
GCCCACGTGCCTGGCCTTCAAGGTCTTATTTCTGACATCGTTGGCATCTT
CGTCAGCATTCGCTTTGCCGCGCACGCTTTACGATTTCAGCTTGAAAGAT
GGCACGGGGAAAACTCAGAGCTTGTCCGTCTACAAAGATAAGCCAGTCGT
GTTAATTTCTTGCTCGTCAACGGTCTGCCCGTGAAGCGCTTCGCCCACAA
CCAAGCCCCGAACGACTTCGAAGGCGAGATCCTCCAGGCGCTGCGTGATG
CGGCATCCAAGGAACTCTAGGCCAGGAACCCGGGTCGGACGCGGAAATCC
TCAAGTTTACGAAAGAGAAGTATGCGGTCACCTTCCCTGTATTTAGCAAG
CTGCTAGTCAACGGACCTCAGGCCTCGGACCTCTACAAATGGCTGAAGGC
GGAGACCCCCAAGGACTCCTCGTCATCCAGCGCCGACATCCGCTGGAATT
TCACCAAGTGTTAATGTGGCGAGTAGATGCGGGTACACGGACTCAAACTA
TCGACAGCTTCAAGTGTTACAGGAAAAGTACGGGGATGACGGGCTGCAGG
TCTTGGCCATGCCCAGCAACGAGTTCGGAGATGTTGTCGGGTCTGTTTTC
TTCGAAGCCCACGTGCCTGGCCTTCAAGGTCTTATTTCTGACATCGTTGG
CATCTTCGTCAGCATTCGCTTTGCCGCGCACGCTTTACGATTTCAGCTTG
AAAGATGGCACGGGGAAAACTCAGAGCTTGTCCGTCTACAAAGATAAGCC
AGTCGTGTTAATTTCTTGCTCGTCAACGGTCTGCCCGTGAAGCGCTTCGC
CCACAACCAAGCCCCGAACGACTTCGAAGGCGAGATCCTCCAGGCGCTGC
GTGATGCGGCATCCAAGGAACTCTAGGCCAGGAACCCGGGTCGGACGCGG
AAATCCTCAAGTTTACGAAAGAGAAGTATGCGGTCACCTTCCCTGTATTT
AGCAAGCTGCTAGTCAACGGACCTCAGGCCTCGGACCTCTACAAATGGCT
GAAGGCGGAGACCCCCAAGGACTCCTCGTCATCCAGCGCCGACATCCGCT
GGAATTTCACCAAGTGTTAATGTGGCGAGTAGATGCGGGTACACGGACTC
AAACTATCGACAGCTTCAAGTGTTACAGGAAAAGTACGGGGATGACGGGC
TGCAGGTCTTGGCCATGCCCAGCAACGAGTTCGGAGATGTTGTCGGGTCT
GTTTTCTTCGAAGCCCACGTGCCTGGCCTTCAAGGTCTTATTTCTGACAT
CGTTGGCATCTTCGTCAGCATTCGCTTTGCCGCGCACGCTTTACGATTTC
AGCTTGAAAGATGGCACGGGGAAAACTCAGAGCTTGTCCGTCTACAAAGA
TAAGCCAGTCGTGTTAATTTCTTGCTCGTCAACGGTCTGCCCGTGAAGCG
CTTCGCCCACAACCAAGCCCCGAACGACTTCGAAGGCGAGATCCTCCAGG
CGCTGCGTGATGCGGCATCCAAGGAACTCTAGGCCAGGAACCCGGGTCGG
ACGCGGAAATCCTCAAGTTTACGAAAGAGAAGTATGCGGTCACCTTCCCT
GTATTTAGCAAGCTGCTAGTCAACGGACCTCAGGCCTCGGACCTCTACAA
ATGGCTGAAGGCGGAGACCCCCAAGGACTCCTCGTCATCCAGCGCCGACA
TCCGCTGGAATTTCACCAAGTGTTAATGTGGCGAGTAGATGCGGGTACAC
GGACTCAAACTATCGACAGCTTCAAGTGTTACAGGAAAAGTACGGGGATG
ACGGGCTGCAGGTCTTGGCCATGCCCAGCAACGAGTTCGGAGATGTTGTC
GGGTCTGTTTTCTTCGAAGCCCACGTGCCTGGCCTTCAAGGTCTTATTTC
TGACATCGTTGGCATCTTCGTCAGCATTCGCTTTGCCGCGCACGCTTTAC
GATTTCAGCTTGAAAGATGGCACGGGGAAAACTCAGAGCTTGTCCGTCTA
CAAAGATAAGCCAGTCGTGTTAAT
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Synonyms
Publications