EWM24006.1, cds6649 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24006.1 vs. NCBI_GenBank
Match: gi|585105293|gb|EWM24006.1| (protein of unknown function DUF1084 [Nannochloropsis gaditana]) HSP 1 Score: 794.653 bits (2051), Expect = 0.000e+0 Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0
Query: 1 MLILDGLGVTPFILALLYLATTALISSRLRNLHTRHPEMNTTKLFVLSVLLSCGMRCLSFIALGAFSVQSIAIDNDASGRASSPSSSWSSTQDPDTQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFLPHGNQDFLSKIIFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSILQGWLSDAHKDRQVYSVVLVGLFLITELIPFFVAMDVSLLASLSTASAVGEEGREGGGEGGEGGTYGALLVPATLSEVEGRGEEAAEEDTKEAWKRENGIGEGVGGPRSVKEGEEDEEMGRRGPAQATGRGGGGKGGDGAVLESKGGE 395
MLILDGLGVTPFILALLYLATTALISSRLRNLHTRHPEMNTTKLFVLSVLLSCGMRCLSFIALGAFSVQSIAIDNDASGRASSPSSSWSSTQDPDTQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFLPHGNQDFLSKIIFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSILQGWLSDAHKDRQVYSVVLVGLFLITELIPFFVAMDVSLLASLSTASAVGEEGREGGGEGGEGGTYGALLVPATLSEVEGRGEEAAEEDTKEAWKRENGIGEGVGGPRSVKEGEEDEEMGRRGPAQATGRGGGGKGGDGAVLESKGGE
Sbjct: 1 MLILDGLGVTPFILALLYLATTALISSRLRNLHTRHPEMNTTKLFVLSVLLSCGMRCLSFIALGAFSVQSIAIDNDASGRASSPSSSWSSTQDPDTQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFLPHGNQDFLSKIIFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSILQGWLSDAHKDRQVYSVVLVGLFLITELIPFFVAMDVSLLASLSTASAVGEEGREGGGEGGEGGTYGALLVPATLSEVEGRGEEAAEEDTKEAWKRENGIGEGVGGPRSVKEGEEDEEMGRRGPAQATGRGGGGKGGDGAVLESKGGE 395
BLAST of EWM24006.1 vs. NCBI_GenBank
Match: gi|298708770|emb|CBJ30731.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 236.113 bits (601), Expect = 6.744e-71 Identity = 127/276 (46.01%), Postives = 184/276 (66.67%), Query Frame = 0
Query: 7 LGVTPFILALLYLATTALISSRLRNLHTRHPEMNTTKLFVLSVLLSCGMRCLSFIALGAFSVQSIAIDNDASGRASSPSSSWSSTQDPDTQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFLPHGNQDFLSKIIFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSIL--QGWLSDAHKDR-QVYSVVLVGLFLITELIPFF 279
LG P I++LLY AT +LR LH + ++T KLF +SVLL C R + F+ +GA +++S+ D +S R SW + D D +FYEK +L+LF+LPDF+ VSAY LLA+VWAEAF+QSR HWLS + ++R LL Y++FN+ LY GQL+LYTLLFLP NQ + +++L + +N LP++L +LF YL+ F+GFPYKS A +++++ +V+ WT R++WG+ LT++L Q + A R QVYS+++V LFL TEL P
Sbjct: 9 LGAAPLIMSLLYGATFLHALGKLRMLHGKSRSLDTKKLFAMSVLLLCLTRTMGFMTIGALNMRSVGGDGSSSRR------SWQN--DADERFYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYTLLFLPSFNQSGVLSVLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSEAAMLRMDRVGRVVMLWTAARVVWGLSTLTAVLEFQRLVGSATSLREQVYSILVVTLFLTTELYPLL 276
BLAST of EWM24006.1 vs. NCBI_GenBank
Match: gi|669149180|ref|XP_008610152.1| (hypothetical protein SDRG_06166 [Saprolegnia diclina VS20] >gi|530738489|gb|EQC36731.1| hypothetical protein SDRG_06166 [Saprolegnia diclina VS20]) HSP 1 Score: 191.045 bits (484), Expect = 4.089e-54 Identity = 109/294 (37.07%), Postives = 168/294 (57.14%), Query Frame = 0
Query: 1 MLILDGLGVTPFILALLYLATTALISSRLRNLHTRHPEMN-TTKLFVLSVLLSCGMRCLSFIALGAFSVQSI-AIDNDASGRASSPSSSWSSTQDPDTQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFLPHG-------NQD------FLSKIIFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSILQGWLSDAHKDRQVYSVVLVGLFLITELIPFF 279
ML L GL + + LAL Y+ T + S+L ++ M+ TT+L ++++ L C R +F L Q A + SGR P + ++ D FY K + +LFNLPD++FVSAY+L+ L+WAE F SR HW S QF R W++ YL+FN LYL Q+VLY LLFL + D + +IF T+ + +LP I+L + YLS+ +GFPYKS A AKL+K+ +V W++GRI++ +++L + +GW + + S++LV LF++ E+ P +
Sbjct: 3 MLFLSGLAMASYFLALCYMLMTFISVSKLYATRHKNASMSRTTQLLLMTISLGCLFRTATFTTLCFLDFQHTDASLSPLSGRFQVPDDT-PHAEESDLSFYNKVVAVLFNLPDYLFVSAYLLVVLLWAETFQSSRRHWFSADQFHRKWMVFYLIFNGGLYLTQVVLYGLLFLKEDGAIAGIFDNDAGTRLALIPLLIFYTVAASDLALPAIILGTWMYLSVTLSGFPYKSVHAKAKLSKVGRVALVWSLGRILYSVMILLTFTKGWFNTEKDTVSMQSMLLVALFVLAEITPIY 295
BLAST of EWM24006.1 vs. NCBI_GenBank
Match: gi|813171910|ref|XP_012204710.1| (hypothetical protein SPRG_10175 [Saprolegnia parasitica CBS 223.65] >gi|641530520|gb|KDO24642.1| hypothetical protein SPRG_10175 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 190.274 bits (482), Expect = 7.349e-54 Identity = 108/294 (36.73%), Postives = 167/294 (56.80%), Query Frame = 0
Query: 1 MLILDGLGVTPFILALLYLATTALISSRLRNLHTRHPEMN-TTKLFVLSVLLSCGMRCLSFIALGAFSVQSI-AIDNDASGRASSPSSSWSSTQDPDTQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFLPHG-------NQD------FLSKIIFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSILQGWLSDAHKDRQVYSVVLVGLFLITELIPFF 279
ML L GL + + LAL Y+ T + S+L ++ M+ TT+L ++++ L C R +F L Q A + S R P + ++ D FY K + +LFNLPD++FVSAY+L+ L+WAE F SR HW S QF R W++ YL+FN LYL Q+VLY LLFL + D + +IF T+ + +LP I+L + YLS+ +GFPYKS A AKL+K+ +V W++GRI++ +++L + +GW + + S++LV LF++ E+ P +
Sbjct: 3 MLFLSGLAMASYFLALCYMLMTFISVSKLYATRHKNASMSRTTQLLLMTISLGCLFRTATFTTLCFLDFQHTDASLSPLSARFQVPDDT-PHAEESDLSFYNKVVAVLFNLPDYLFVSAYLLVVLLWAETFQSSRRHWFSADQFHRKWMVFYLIFNGGLYLTQVVLYGLLFLKEDGAIAGIFDNDAGTRLALIPSLIFYTVAAADLALPAIILGTWMYLSVTLSGFPYKSVHAKAKLSKVGRVALVWSLGRILYSVMILLTFTKGWFNTEKDTVSMQSMLLVALFVLAEITPIY 295
BLAST of EWM24006.1 vs. NCBI_GenBank
Match: gi|673052895|ref|XP_008880408.1| (hypothetical protein H310_14342 [Aphanomyces invadans] >gi|574463964|gb|ETV91019.1| hypothetical protein H310_14342 [Aphanomyces invadans]) HSP 1 Score: 184.882 bits (468), Expect = 7.591e-52 Identity = 113/317 (35.65%), Postives = 177/317 (55.84%), Query Frame = 0
Query: 1 MLILDGLGVTPFILALLYLATTAL-ISSRLRNLHTRHPEMNTTKLFVLSVLLSCGMRCLSFIALGAFSVQSIAIDNDASGRA--SSP--SSSWSSTQDPDTQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFL-------------PHGNQ-DFLSKIIFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSILQGWLSDAHKDRQVYSVVLVGLFLITELIPFFVAMDVSLLASLSTASAVGE 298
M+ L GL ++ + LAL Y+ T + IS N + + TT+L ++SV L C R +F L Q + SG + SSP + ++ D FY K + +LFNLPD++FVS+Y+L+ L+WAE + SR HW S +QF R W++ YL+FN LYL Q+VLY LLFL G Q + +IF + + LP+I+L + YL++ +GFPYKS A AKL KI ++ W++GRI++ +++L + +GW + + S++LV LF+ E++P ++ +D LL LS +A +
Sbjct: 3 MIFLSGLAMSSYFLALCYMLMTFMGISKLCSNKNLSYSR--TTQLLMVSVSLGCLFRAATFSTLCFLDFQ-----HTESGLSPLSSPLRVPEGPAPEESDLSFYNKVVAVLFNLPDYLFVSSYLLVVLLWAETYQSSRRHWFSAEQFHRRWMIFYLIFNGMLYLTQVVLYALLFLRADPSAIAGIYENDEGTQLALVPTLIFDCVAAADLCLPLIILTTWIYLTLTLSGFPYKSHHAQAKLAKIGRLAMAWSVGRILYSVMMLLTFTRGWFNVGKNNATTQSMLLVALFVAAEILPIYILIDADLLRLLSMDAAYEQ 312
BLAST of EWM24006.1 vs. NCBI_GenBank
Match: gi|695375861|ref|XP_009515644.1| (hypothetical protein PHYSODRAFT_470018 [Phytophthora sojae] >gi|348688555|gb|EGZ28369.1| hypothetical protein PHYSODRAFT_470018 [Phytophthora sojae]) HSP 1 Score: 184.882 bits (468), Expect = 2.038e-51 Identity = 120/326 (36.81%), Postives = 172/326 (52.76%), Query Frame = 0
Query: 2 LILDGLGVTPFILALLYLATTALISSR---LRNLHTRHPEM--NTTKLFVLSVLLSCGMRCLSFIALGAFSVQSIA-IDNDASGRAS------SPSSSWSSTQDPD--------------TQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFLPHGN-------QDFLSKI---IFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSILQGWLSDAHKDRQVYSVVLVGLFLITELIPFFVAMDVSLLASLS 291
L L L + + LAL Y+ TA+ ++ LR + RH +T +L +LSV L R +F L F Q+ A + SG P+ +D D FY K + +LFNLPDF+FVS+Y+LL LVWAEAF SR HW S FRR W++ YLVFN LYL QLVLY LFL N QD LS I IF + + LPII+ + YL++ +GFP+KS A +L ++ +++ W+ GRI++ ++ L + +GW + + +++LVG+F ELIP ++ +D LLA LS
Sbjct: 3 LFLANLAMASYFLALCYVLITAMTVNKYIELRGVLKRHQHTTWSTVQLLILSVALGSFFRSATFSTLCIFDSQATADLPTGISGTNPWTRGGLPPAYGGEDAEDADGATRGQAGSHAQAELDFYNKVVAVLFNLPDFLFVSSYLLLVLVWAEAFQSSRRHWFSAAVFRRKWMIFYLVFNGGLYLTQLVLYASLFLYDKNGIFDDEKQDRLSVIPATIFYLVAAADLFLPIIIFSTWLYLTLSLSGFPFKSPSAKLRLQRVGRLVMAWSCGRILYSVMTLLTFTKGWFNVHREHASTQAMLLVGVFFAAELIPIYLTLDKRLLAMLS 328
BLAST of EWM24006.1 vs. NCBI_GenBank
Match: gi|698813056|ref|XP_009839557.1| (hypothetical protein H257_13658 [Aphanomyces astaci] >gi|574105370|gb|ETV70894.1| hypothetical protein H257_13658 [Aphanomyces astaci]) HSP 1 Score: 183.726 bits (465), Expect = 2.870e-51 Identity = 110/317 (34.70%), Postives = 179/317 (56.47%), Query Frame = 0
Query: 1 MLILDGLGVTPFILALLYLATTAL-ISSRLRNLHTRHPEMNTTKLFVLSVLLSCGMRCLSFIALGAFSVQSIAIDNDASGRA--SSPSS--SWSSTQDPDTQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFLP---------HGNQD-----FLSKIIFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSILQGWLSDAHKDRQVYSVVLVGLFLITELIPFFVAMDVSLLASLSTASAVGE 298
M+ L GL ++ + LAL Y+ T + IS N + + TT+L ++SV L C R +F L Q + SG + SSP ++ ++ D FY K + +LFNLPD++FVS+Y+L+ L+WAE + SR HW S +QF R W++ YL+FN LYL Q+VLY LLFL + N++ + +IF + + LP+I+ + + YL++ +GFPYKS A KL KI ++ W++GRI++ +++L + +GW + + S++LV LF+ E++P ++ +D LL LS +A +
Sbjct: 3 MIFLSGLAMSSYFLALCYMLMTFMGISKLCSNKNLSYSR--TTQLLMVSVSLGCLFRAATFSTLCFLDFQ-----HTESGLSPLSSPVHVPEVTAPEESDLSFYNKVVAVLFNLPDYLFVSSYLLVVLLWAETYQSSRRHWFSAEQFHRRWMIFYLIFNGLLYLTQVVLYALLFLRADPSAIAGIYENEEGTQLALVPTLIFDCVAAADLCLPLIIFITWVYLTLTLSGFPYKSHHAQIKLAKIGRLAMAWSLGRILYSVMMLLTFTRGWFNVGKNNATTQSMLLVALFMAAEILPIYILIDADLLRLLSMDAAYEQ 312
BLAST of EWM24006.1 vs. NCBI_GenBank
Match: gi|301117716|ref|XP_002906586.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262107935|gb|EEY65987.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 184.111 bits (466), Expect = 3.561e-51 Identity = 118/324 (36.42%), Postives = 175/324 (54.01%), Query Frame = 0
Query: 2 LILDGLGVTPFILALLYLATTALISSR---LRNLHTR--HPEMNTTKLFVLSVLLSCGMRCLSFIALGAFSVQSIA-IDNDASG-----RASSPSSSWSSTQDPD------------TQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFL-------PHGNQDFLSKI---IFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSILQGWLSDAHKDRQVYSVVLVGLFLITELIPFFVAMDVSLLASLST 292
L L L ++ + LAL Y+ TA+ ++ +R + R H +T +L +LS+ L R +F L Q+ A + SG R PS +D D FY K + +LFNLPDF+FVS+Y+LL LVWAEAF SR HW S FRR W++ YLVFN LYL QLVLY LFL H QD LS I IF + + LPII+ + YL++ +GFP+KS+ A +L ++ +++ W+ GRI++ ++ L + +GW + ++ +++LV +F+ ELIP ++ +D LLA LS
Sbjct: 3 LFLANLAMSSYFLALCYVLLTAMTVNKYLEVRGVLKRLQHTTWSTVQLLILSLALGSFFRSATFSTLCILDSQATADLPTGISGANPWVRGGLPSHFGEDAEDTDGGDAAGSHAEAELDFYNKVVAVLFNLPDFLFVSSYLLLVLVWAEAFQSSRRHWFSAAMFRRKWMIFYLVFNGGLYLTQLVLYASLFLYDTNGIFDHEKQDRLSPIPAMIFYLVAAADLFLPIIIFSTWLYLTLSLSGFPFKSQSAQLRLQRVGRLVMAWSFGRILYSVMTLLTFTKGWFNVHRENASTQAMLLVIVFIAAELIPIYLTLDKRLLAMLSV 326
BLAST of EWM24006.1 vs. NCBI_GenBank
Match: gi|325185158|emb|CCA19649.1| (conserved hypothetical protein [Albugo laibachii Nc14] >gi|325188548|emb|CCA23081.1| conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 183.726 bits (465), Expect = 4.597e-51 Identity = 108/321 (33.64%), Postives = 173/321 (53.89%), Query Frame = 0
Query: 2 LILDGLGVTPFILALLYLATTALISSR---LRNLHTRHPEM--NTTKLFVLSVLLSCGMRCLSFIALGAF--SVQSI--------------AIDNDASGRASSPSSSWSSTQDPDTQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFLPHGNQDF----------LSKIIFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSILQGWLSDAHKDRQVYSVVLVGLFLITELIPFFVAMDVSLLASLS 291
L L LG+ + LAL Y+ T + ++ LR + R+ NT +L + S+ L R +F L F S +SI I +D++ + S + + FY K + +LFNLPD++FVS+Y+L+ LVWAE+F SR HW S +QFRR W++ YLVFN LYL Q+ LYT+LFL N F + ++IF + + LPII+ + YL++ +GFP++S +L ++ ++ W++GRI++ ++ L + +GW + H V S+VLV +F + E++P + +D LL LS
Sbjct: 3 LFLANLGMASYFLALCYMFLTVITMTKYMELRRVLRRYQFTGWNTVQLLIWSIALGAFFRMTTFSTLCIFDYSQRSIRPYPYVIIGVPPYNPIQHDSNNVVEKDADKLVSASETELNFYNKVVAVLFNLPDYLFVSSYLLVVLVWAESFQSSRHHWFSAEQFRRKWMIFYLVFNGALYLAQVFLYTMLFLFDSNGIFRDSSERRLRVIPEMIFYVVAATDLLLPIIISTTWLYLTLSLSGFPFRSSSTKFRLKRVGRLAMVWSLGRILYSVMTLLTFTRGWFNVNHGKETVQSMVLVAVFFVAEILPIYSTLDARLLTMLS 323
BLAST of EWM24006.1 vs. NCBI_GenBank
Match: gi|1214711000|gb|OWZ22042.1| (hypothetical protein PHMEG_0003307 [Phytophthora megakarya]) HSP 1 Score: 182.57 bits (462), Expect = 1.233e-50 Identity = 115/323 (35.60%), Postives = 179/323 (55.42%), Query Frame = 0
Query: 2 LILDGLGVTPFILALLYLATTALISSR---LRNLHTRHPEM--NTTKLFVLSVLLSCGMRCLSFIALGAFSVQSIA-IDNDASGRAS------SPS----SSWSSTQD-------PDTQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFLPHGN-------QDFLSKI---IFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSILQGWLSDAHKDRQVYSVVLVGLFLITELIPFFVAMDVSLLASLS 291
L L L + + LAL Y+ TA+ ++ +R + RH +T +L ++SV L R +F L Q+ A + +G+ + P+ + +T D + FY K + +LFNLPDF+FVS+Y+LL LVWAEAF SR HW S FRR W++ YLVFN LYL QLVLY LFL + QD LS I IF + + LPII+ + YL++ +GFP+K++ A A+L ++ +++ W+ GRI++ ++ L + +GW + ++ + +++LVG+F ELIP ++ +D LLA LS
Sbjct: 3 LFLANLAMASYFLALCYVLITAMTVNKYLEVRGVLKRHQHTTWSTVQLLIMSVALGSFFRSATFSTLCILDSQATADLPTGITGKNTWTHGGLPPTYGGEDEYGATGDEAGSHAQAELDFYNKVVAVLFNLPDFLFVSSYLLLVLVWAEAFQSSRRHWFSAAVFRRKWMIFYLVFNGGLYLMQLVLYASLFLYDKSGIFDDEKQDHLSVIPATIFYLVAAADLFLPIIIFSTWLYLTLSLSGFPFKAQSAQARLQRVGRLVMAWSCGRILYSVMTLLTFTKGWFNVHRENVSIQAMLLVGVFFAAELIPIYLTLDKRLLAMLS 325 The following BLAST results are available for this feature:
BLAST of EWM24006.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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