|
|
Properties
| Property Name | Value |
|---|
| Product | protein of unknown function DUF1084 |
| Orig transcript id | gnl|cribi|Naga_100040g13.2004.mrna |
| Orig protein id | gnl|cribi|Naga_100040g13.2004 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:207758..209680 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6665 ID=rna6665|Name=rna6665|organism=Nannochloropsis gaditana|type=mRNA|length=4157bp
CAGCTTGCTCGCTTTGCCTGCCAAACCGTTGTTGCCCTTGCGCTCGTACA
CTGACTTGTCTCTCAATCCCATGCCTCTTGCCGCTCCACACTCTCCTTTC
CGCCCACACGTTTATAGGAGGCCACTGCGTGGGTGGTGTCCCAGGTGATT
GTGAACGAGAACAAGCTTTCGGAGCCGGAAAGGCCGGATTGTCACTATTT
TCTTGCCAACGCCACCGCCCGCTCGCCCTATCCTATTGCAACCTGCGGCA
CCGACGTTACTGCGTTCCATGAAGCGTGGCTGTCCTGGACTGGGAAAAAG
GAACATTTGAAACTAGTTGAACGATTGCGCGTCACCATTTTTATTGTTCT
AGAACGACATCAGGACATCTGCTTCGTCGGTAAGGCCGGCGACTGCCGCC
CGCTGGCAGCCCCTCCCTCCTACCGGCCGTAGGGTGGTATCCCTACCAGC
TTACTTTAGCCATGGACGCACAAGGCCTCCAGCAGTTAGAGTTGTTGTGC
GATGCCCTCTATAATTCCAGCAGTGAATCGGAACGGCAACAAGCGCAACA
GCAGCTTCTTTCCCTGCAATCGTCAGCGGAATATATACCCCAGTGCCAAT
ACATCCTCGACCACTCCCACTCCTCGTACGCCCTCTTTGTGGCCGCCAAC
GCCCTCACAAAACTTATCACTCAGTACTGGAACAATTTTTCGGTCGCTCA
ACGTGTGGAAATTAGAAATTACGTCCTCTCTTATCTGGCCAACCAGGGTC
ACCAAGTGCCAGATTTTGTGACGACGAGCCTCATCCAGCTCGTCTGTCGA
ATCACCAAGCTAGGCTGGTTCGACGACCCCCAGCACAGGGAGCTTGTGGA
AGATGTGGAGAAATTCTTGCATGCAAACGTGGACTACTGCATAGTGGGCC
TGCGGATCCTAAACCAAGTGGTGGAGGAGTTTAACCTCCCGACGAGCGGG
CGCACCCTCACCCTGCATCGGAAAACGGCTGTGTCTTTCCGAGACCTCTG
CCTTTTTCACATATTCCAAATCTGCCTCTCCACCCTCCAGCAAGTCCAAC
GCCGGCAATTCGCCAACGCTTCCCCCCAACAGGAGGTGAAGATCGCGGAG
CAGGCCCTCGCCCTCGCCGTTCGCGCCCTTTCTTTCGACTTCATCGGCAC
CAACCCGGACGAGTCGGCCGAGGACGTGGGCACCATCCAAGTCCCCAACA
CGTGGCGACGGCTCGTGCAAAACCCGGAGACGATGAGCCTTTTCCTCGAC
TTCTACAAGAACACCCAGCCCCCGTCCTCGTCCTCTGCGCTCCAGGCGGT
CATCTTGCTCTCCTCCGTGCGCCGTTCTCTCTTCGCCACCGACAAGGACC
GAGCCGCCTTCCTGCAGCAGCTGGTCACCGCCATCCGCGAAATCCTCCAG
ACCGAGCAAGGCCTCAATTTCCAGGAGAACTACCACGAGTTCTGCCGCCT
CCTTGGCCGTCTCAAAGCCAACTACCAGCTCTGCGAATTGGTCCGCACGG
AGGGCTTCAATGAATGGTGCGACCTTGCAGCTGCCTTTACGGTCAGAAGC
TTTCAACAGTGGCAGTGGTTCGGGAACTCGATCCACTACCTGCTGGGCTT
GTGGGGACGCTTGATCGCGGCCATTCCATACGTGCCGCAACAGCCCACGG
GGTCGGCCTCCGGGGCGAACGGGGGTGGGAAAAACTATCGGGAAAACATG
CAGCGCTGCGTCTTGCAGGTAGTGCAGTCCTACATCAAGTGCATGGTCGA
CTCGGTGGAGGTGGTGGTGCGCTCGGACGGGGGCCTGGAGGACCCACTGG
ACGACGAGGGCTCCCTGAAAGACCAACTGGAACGCCTCCCCGTCATCTGC
CTCTTCCAATACCCCGCCGTCGCCCAGTACCTCATGTCCTTCTTGGACCC
CCTTCTGCAAACCTACCGGGAGAAGGTCTTGAAGAACCTTTCCCCCGCCC
AGCTGGCGGCGACCGCGCCCGGGGAAACCGCCTCCCAGTTGAAGATCTTG
GACGGGCAATTGACCTGGTTGGTCTACGTGGTGGGCGCCATCATCGGTGG
CCACACCTCGGAGATCCACGGGACGTCATCCTCCTCCTCCGACTCGGGCG
CGGTCAGCCAGGAGAGCATGGACGCGAACTTGGCCTCGCGGTGCCTCCTC
CTGGCTCAGGACTTCAATGTCCGGGCGCAGCAAACGGGGGGCCCCGGGCC
GTGTTCGCCGCGCTTGGAGCTTGCGCTGGTCTCCTTCTTTCAAAGCTTTC
GGAAGATGTACGCGAGCGAGATGCCCCACATGCTCTCCATGTCCCCGGCC
TCCCTGTCCGCGGCCATACGGATGGACGCAGGCGGCGGGATGATGAAGCA
AAAGGCCTACCAGACTGTGTACGATCTGATGGGACTGGGGGACCAGGTGG
GGATCACCAACATCATCGTCACTAAGGTCGGTAACAACCTGAAATACTGG
GGCAAGAACGAGGACGTGGTGTCCCGGACCCTGCAGCTATTCTTGGAGAT
GACCATGGGCTGTGGAAGTGCCAAGGTCCTCCTCTCCCTTGACCCCATCC
AATACCTGCTCCACCACCACACGCCCGAGTACTTCCCTTTCCTCTCCGTC
CCGGCCAACAGTCGGCACCGGACGTCCTTCCACACGACCTTGGCGCGGCT
CATCCTCTCGGTGGTAGACGAGGGGACCTCGGCCGCCTTCGAGTCCTTCA
TGGAGCCCATCCTGCGGGTCTTGGGCCGTCTCCAAGAGACCACCGAGATG
CGGACCGAGGAGGCGAAGCAGGCGGTGATCGGCGTGTGCCGGGACCTGCG
GGGGGTGACGGCCGCCACCCAGAACAGGAAGGCTTACTGTGCCCTCTTCG
AGCTCCTCTACCCTCAGTACTTCCCCGTCTTTGTCCGGGCGGCGGAAGTC
TGGTTCGACACGCCGGAGGTGACCACGGCCCTTTTGAAATTCATGCAAGA
GTTCGTCCACAACAAGGCGCAGCGCCTCATGTTCGACCAGAGCAGTCCGA
ACGGGATCCTACTCTTCCGGGAGGCAAGCCGCGTCCTGGTCGCCTACGGG
ACGCGCGTGCTCCAACACCCCTTCCGCGTGGACGTGTACAAGGAGAAGTA
CAAGGGTATTGCCATCTCTTTGAACGTCTTGACCTGCGCTCTCTCGGGGA
ATTATGTGAATTTCGGGGTTTTCGCCCTCTACGATGACCCAGCTCTCGAC
AACGCCTTGGACGTCGTCCTCCGCCTGGCCCTTTCCATCCCATTCCAAGA
AATCTTGGCCTTCCCCAAGCTCAGCAAAGCCTACTTCGCCTTCTTCGAAG
TGCTCTTCCGGAACCACATCCCCGCCGTCCTCTCCCTCTCCACCCCCGTC
TTCCTCCAAGTCATCCAGGCCCAGCACGAAGGCCTCCAGTCCGTCGACCC
TCTCCTCTCGGCGCAGTGCGCCTCCACCATCGACTACCTGGCCACTTACT
ACTACCAAAACAAATCCAAAGACCGCCCGCCCATGCGCGCCCTTCGCAAC
CACCTGCAGGCGCAGCCCGACGTGATCTTCACCCTCCTGTCCACGCTCTT
CAATCAACTCCTCTTCGGCTCTGTCAACCACTGGGCGATCACCCGGCCCG
TCCTTTCCCTCATGCTCGCCTCGGAGGAGGATTTCAACGCTTACAAGGAG
CACATGATCAGCACCCAGTCCTCCCCTGAAAACCGGACTCGGCTGCGGGA
AGAGTTTGCGAGGCTCTGCAACGATTTGCAAAGGAATTTGGAGCCGAGTA
ACAGGGAGCGGGTGGGGCAGAAATTGACTGTCTTCAGGGTTGCGGTCTCG
CAGTTCTTGGCAAGTTAGGAGGGAAAGGAGATGGAGAAGTGGGAAGGGAG
AGGAGGCGAGCGCGAGAGGTTTGGCGGTACCCCCTTTCCCAATGGAAGGG
GGCGGGGGGAAGACATACAAGGAAATTTTTAGAAAGTCCAGAGGCCAAGC
CCGACGTCCTCGACCACCACCAACCGATGCCTGGGATTTCGTGACGATAT
TTCCATCTGGATTTACTTTTGAAATATTTTGTTACATGACGCGCCCGAGC
GCTCGCTATACCTCTTTCTGTACACTGGCGCCCAGCACGGCTCCCTCCAT
CCCCATGCCCCCTACTTTGTGCCCCCCTGAGATTCAGTCACGGGCACCAG
GCTCCCA back to topprotein sequence of rna6665 >rna6665-protein ID=rna6665-protein|Name=rna6665|organism=Nannochloropsis gaditana|type=polypeptide|length=395bp
MLILDGLGVTPFILALLYLATTALISSRLRNLHTRHPEMNTTKLFVLSVL
LSCGMRCLSFIALGAFSVQSIAIDNDASGRASSPSSSWSSTQDPDTQFYE
KALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSY
LVFNACLYLGQLVLYTLLFLPHGNQDFLSKIIFLTLCVINFSLPIILLLL
FFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSILQG
WLSDAHKDRQVYSVVLVGLFLITELIPFFVAMDVSLLASLSTASAVGEEG
REGGGEGGEGGTYGALLVPATLSEVEGRGEEAAEEDTKEAWKRENGIGEG
VGGPRSVKEGEEDEEMGRRGPAQATGRGGGGKGGDGAVLESKGGE back to topmRNA from alignment at CM002469.1:207758..209680- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6665 ID=rna6665|Name=rna6665|organism=Nannochloropsis gaditana|type=mRNA|length=1923bp|location=Sequence derived from alignment at CM002469.1:207758..209680- (Nannochloropsis gaditana)
CGACAAAGCGTGCATCGTTCAGCCGGCGCTCACCTTCTTGCGTTTTTCTT
CTTACATTGCCTCCGCGTTCCAGTTCAGGGCAAGAGGAACACGCTAAAAG
GGACGTGCTTCTCCACCACCGCAGCCTGCCACACCTTTCCCACCAAAAAA
GGACGCCATGCTCATCCTGGACGGGTTAGGCGTCACTCCTTTCATCCTTG
CCCTCCTCTACCTGGCCACGACGGCCCTCATATCCTCCCGCCTCCGAAAC
CTTCACACTCGGCACCCCGAAATGAACACCACTAAGCTCTTTGTGCTCTC
CGTTCTCTTGAGCTGTGGTATGCGTTGCCTTAGCTTCATTGCTTTGGGTG
CATTTTCGGTACAATCTATCGCCATTGATAACGACGCCAGCGGTCGCGCC
TCTTCACCCTCTTCCTCCTGGTCCTCCACGCAAGACCCTGACACCCAATT
CTACGAGAAGGTAAGCCTGAGAGCCAGGAGGCTCCGTGTTGCACCGTTTC
CTACGTTTGGCGGCAAGCATACGCCTCATACCAATGGGTCTCCGCCTCCC
ACCACCCTCTTCATGACTATGCCCCCCTTTCCCCATGTCCCGGCAGGCCC
TCCTTATCCTCTTCAACCTCCCCGACTTCGTCTTCGTCTCCGCCTACGTC
CTCCTTGCTCTTGTCTGGGCCGAGGCCTTCATCCAGTCTCGCTCTCACTG
GCTGTCCATCAAGCAGTTCCGCCGAATGTGGCTGCTCTCGTACCTGGTGT
TCAACGCCTGCTTGTACCTCGGCCAGCTCGTTCTCTACACCCTCCTCTTT
CTGCCCCACGGGAACCAAGACTTCCTCTCCAAAATCATTTTCCTCACCCT
CTGCGTCATCAATTTCTCACTCCCCATCATATTGCTACTCCTCTTCTTCT
ACCTCTCCATCATGTTCGCCGGTTTCCCTTACAAGAGCCGCCGCGCCCCG
GCAAAGTTGAATAAGATCAGCAAGGTGCCTGACTCGCGCGGGAGGCATGG
TGATACCGAAGGGGGAGAGAGAAAAAGGAGAGAGAAGGTTTGACATGGGT
TTTGACGATCGTGCATGAATACATGCGGTCGCCAGCACCTCTCAGGGACG
CGTCTCAACCTTTCCCCCCCGCCCTCTCCCCCGTCTTCCCCCCCACATCC
CCCTGAACCGTGCAGGTGATGGCTTGGTGGACGATCGGGCGCATCATTTG
GGGCATCGTGGTGCTCACCTCCATCCTGCAGGGCTGGCTCTCGGACGCCC
ACAAGGACCGCCAGGTGTACTCCGTTGTGCTGGTGGGACTTTTCCTGATC
ACCGAGCTCATTCCCTTCTTCGTGGCCATGGACGTGTCGCTCTTGGCATC
CCTGTCCACGGCGTCGGCGGTGGGGGAGGAAGGGAGGGAGGGAGGGGGGG
AGGGAGGGGAGGGGGGGACCTACGGGGCCTTGCTGGTGCCGGCGACCTTG
TCGGAGGTGGAGGGAAGAGGGGAGGAGGCGGCGGAGGAGGACACGAAGGA
GGCCTGGAAGAGGGAGAACGGGATAGGTGAAGGAGTGGGAGGGCCGAGGA
GCGTGAAGGAGGGGGAGGAGGACGAGGAAATGGGGAGAAGAGGGCCTGCG
CAGGCCACAGGAAGGGGGGGAGGGGGGAAGGGGGGGGACGGGGCCGTGCT
GGAGAGTAAGGGAGGAGAGTGAAAACAGACGGGCTGTTCGAAATGCGCAA
GATGGGAGCCTGGTGCCCGTGACTGAATCTCAGGGGGGCACAAAGTAGGG
GGCATGGGGATGGAGGGAGCCGTGCTGGGCGCCAGTGTACAGAAAGAGGT
ATAGCGAGCGCTCGGGCGCGTCATGTAACAAAATATTTCAAAAGTAAATC
CAGATGGAAATATCGTCACGAAATCCCAGGCATCGGTTGGTGGTGGTCGA
GGACGTCGGGCTTGGCCTCTGGA back to topCoding sequence (CDS) from alignment at CM002469.1:207758..209680- >rna6665 ID=rna6665|Name=rna6665|organism=Nannochloropsis gaditana|type=CDS|length=3564bp|location=Sequence derived from alignment at CM002469.1:207758..209680- (Nannochloropsis gaditana)
GTGATGGCTTGGTGGACGATCGGGCGCATCATTTGGGGCATCGTGGTGCT
CACCTCCATCCTGCAGGGCTGGCTCTCGGACGCCCACAAGGACCGCCAGG
TGTACTCCGTTGTGCTGGTGGGACTTTTCCTGATCACCGAGCTCATTCCC
TTCTTCGTGGCCATGGACGTGTCGCTCTTGGCATCCCTGTCCACGGCGTC
GGCGGTGGGGGAGGAAGGGAGGGAGGGAGGGGGGGAGGGAGGGGAGGGGG
GGACCTACGGGGCCTTGCTGGTGCCGGCGACCTTGTCGGAGGTGGAGGGA
AGAGGGGAGGAGGCGGCGGAGGAGGACACGAAGGAGGCCTGGAAGAGGGA
GAACGGGATAGGTGAAGGAGTGGGAGGGCCGAGGAGCGTGAAGGAGGGGG
AGGAGGACGAGGAAATGGGGAGAAGAGGGCCTGCGCAGGCCACAGGAAGG
GGGGGAGGGGGGAAGGGGGGGGACGGGGCCGTGCTGGAGAGTAAGGGAGG
AGAGTGAGCCCTCCTTATCCTCTTCAACCTCCCCGACTTCGTCTTCGTCT
CCGCCTACGTCCTCCTTGCTCTTGTCTGGGCCGAGGCCTTCATCCAGTCT
CGCTCTCACTGGCTGTCCATCAAGCAGTTCCGCCGAATGTGGCTGCTCTC
GTACCTGGTGTTCAACGCCTGCTTGTACCTCGGCCAGCTCGTTCTCTACA
CCCTCCTCTTTCTGCCCCACGGGAACCAAGACTTCCTCTCCAAAATCATT
TTCCTCACCCTCTGCGTCATCAATTTCTCACTCCCCATCATATTGCTACT
CCTCTTCTTCTACCTCTCCATCATGTTCGCCGGTTTCCCTTACAAGAGCC
GCCGCGCCCCGGCAAAGTTGAATAAGATCAGCAAGATGCTCATCCTGGAC
GGGTTAGGCGTCACTCCTTTCATCCTTGCCCTCCTCTACCTGGCCACGAC
GGCCCTCATATCCTCCCGCCTCCGAAACCTTCACACTCGGCACCCCGAAA
TGAACACCACTAAGCTCTTTGTGCTCTCCGTTCTCTTGAGCTGTGGTATG
CGTTGCCTTAGCTTCATTGCTTTGGGTGCATTTTCGGTACAATCTATCGC
CATTGATAACGACGCCAGCGGTCGCGCCTCTTCACCCTCTTCCTCCTGGT
CCTCCACGCAAGACCCTGACACCCAATTCTACGAGAAGGTGATGGCTTGG
TGGACGATCGGGCGCATCATTTGGGGCATCGTGGTGCTCACCTCCATCCT
GCAGGGCTGGCTCTCGGACGCCCACAAGGACCGCCAGGTGTACTCCGTTG
TGCTGGTGGGACTTTTCCTGATCACCGAGCTCATTCCCTTCTTCGTGGCC
ATGGACGTGTCGCTCTTGGCATCCCTGTCCACGGCGTCGGCGGTGGGGGA
GGAAGGGAGGGAGGGAGGGGGGGAGGGAGGGGAGGGGGGGACCTACGGGG
CCTTGCTGGTGCCGGCGACCTTGTCGGAGGTGGAGGGAAGAGGGGAGGAG
GCGGCGGAGGAGGACACGAAGGAGGCCTGGAAGAGGGAGAACGGGATAGG
TGAAGGAGTGGGAGGGCCGAGGAGCGTGAAGGAGGGGGAGGAGGACGAGG
AAATGGGGAGAAGAGGGCCTGCGCAGGCCACAGGAAGGGGGGGAGGGGGG
AAGGGGGGGGACGGGGCCGTGCTGGAGAGTAAGGGAGGAGAGTGAGCCCT
CCTTATCCTCTTCAACCTCCCCGACTTCGTCTTCGTCTCCGCCTACGTCC
TCCTTGCTCTTGTCTGGGCCGAGGCCTTCATCCAGTCTCGCTCTCACTGG
CTGTCCATCAAGCAGTTCCGCCGAATGTGGCTGCTCTCGTACCTGGTGTT
CAACGCCTGCTTGTACCTCGGCCAGCTCGTTCTCTACACCCTCCTCTTTC
TGCCCCACGGGAACCAAGACTTCCTCTCCAAAATCATTTTCCTCACCCTC
TGCGTCATCAATTTCTCACTCCCCATCATATTGCTACTCCTCTTCTTCTA
CCTCTCCATCATGTTCGCCGGTTTCCCTTACAAGAGCCGCCGCGCCCCGG
CAAAGTTGAATAAGATCAGCAAGATGCTCATCCTGGACGGGTTAGGCGTC
ACTCCTTTCATCCTTGCCCTCCTCTACCTGGCCACGACGGCCCTCATATC
CTCCCGCCTCCGAAACCTTCACACTCGGCACCCCGAAATGAACACCACTA
AGCTCTTTGTGCTCTCCGTTCTCTTGAGCTGTGGTATGCGTTGCCTTAGC
TTCATTGCTTTGGGTGCATTTTCGGTACAATCTATCGCCATTGATAACGA
CGCCAGCGGTCGCGCCTCTTCACCCTCTTCCTCCTGGTCCTCCACGCAAG
ACCCTGACACCCAATTCTACGAGAAGGTGATGGCTTGGTGGACGATCGGG
CGCATCATTTGGGGCATCGTGGTGCTCACCTCCATCCTGCAGGGCTGGCT
CTCGGACGCCCACAAGGACCGCCAGGTGTACTCCGTTGTGCTGGTGGGAC
TTTTCCTGATCACCGAGCTCATTCCCTTCTTCGTGGCCATGGACGTGTCG
CTCTTGGCATCCCTGTCCACGGCGTCGGCGGTGGGGGAGGAAGGGAGGGA
GGGAGGGGGGGAGGGAGGGGAGGGGGGGACCTACGGGGCCTTGCTGGTGC
CGGCGACCTTGTCGGAGGTGGAGGGAAGAGGGGAGGAGGCGGCGGAGGAG
GACACGAAGGAGGCCTGGAAGAGGGAGAACGGGATAGGTGAAGGAGTGGG
AGGGCCGAGGAGCGTGAAGGAGGGGGAGGAGGACGAGGAAATGGGGAGAA
GAGGGCCTGCGCAGGCCACAGGAAGGGGGGGAGGGGGGAAGGGGGGGGAC
GGGGCCGTGCTGGAGAGTAAGGGAGGAGAGTGAGCCCTCCTTATCCTCTT
CAACCTCCCCGACTTCGTCTTCGTCTCCGCCTACGTCCTCCTTGCTCTTG
TCTGGGCCGAGGCCTTCATCCAGTCTCGCTCTCACTGGCTGTCCATCAAG
CAGTTCCGCCGAATGTGGCTGCTCTCGTACCTGGTGTTCAACGCCTGCTT
GTACCTCGGCCAGCTCGTTCTCTACACCCTCCTCTTTCTGCCCCACGGGA
ACCAAGACTTCCTCTCCAAAATCATTTTCCTCACCCTCTGCGTCATCAAT
TTCTCACTCCCCATCATATTGCTACTCCTCTTCTTCTACCTCTCCATCAT
GTTCGCCGGTTTCCCTTACAAGAGCCGCCGCGCCCCGGCAAAGTTGAATA
AGATCAGCAAGATGCTCATCCTGGACGGGTTAGGCGTCACTCCTTTCATC
CTTGCCCTCCTCTACCTGGCCACGACGGCCCTCATATCCTCCCGCCTCCG
AAACCTTCACACTCGGCACCCCGAAATGAACACCACTAAGCTCTTTGTGC
TCTCCGTTCTCTTGAGCTGTGGTATGCGTTGCCTTAGCTTCATTGCTTTG
GGTGCATTTTCGGTACAATCTATCGCCATTGATAACGACGCCAGCGGTCG
CGCCTCTTCACCCTCTTCCTCCTGGTCCTCCACGCAAGACCCTGACACCC
AATTCTACGAGAAG back to top
|