EWM24048.1, cds6630 (CDS) Nannochloropsis gaditana

Overview
NameEWM24048.1
Unique Namecds6630
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:166407..168083 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24048.1
Productepsilon 1
Orig transcript idgnl|cribi|Naga_100280g8.2297.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:166407..168083 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0051258protein polymerization
GO:0007017microtubule-based process
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO:0005874microtubule
Vocabulary: INTERPRO
TermDefinition
IPR008280Tub_FtsZ_C
IPR017975Tubulin_CS
IPR023123Tubulin_C
IPR018316Tubulin/FtsZ_2-layer-sand-dom
IPR003008Tubulin_FtsZ_GTPase
IPR004057Epsilon_tubulin
IPR000217Tubulin
Homology
BLAST of EWM24048.1 vs. NCBI_GenBank
Match: gi|585105339|gb|EWM24048.1| (epsilon 1 [Nannochloropsis gaditana])

HSP 1 Score: 1149.04 bits (2971), Expect = 0.000e+0
Identity = 558/558 (100.00%), Postives = 558/558 (100.00%), Query Frame = 0
Query:    1 MNRFPGKMPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDDHGELKFTDSMSSFFHLHDNDDLICGTARKVRDRIVKPGALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLPKEGKMRPLPRPTPTAAPAPAAAALRGAAGGLEQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSLSSSTGTSRNNAQEWEPLGSAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGSSSSPTSSGPPPPPSLLSLTNNSCVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEYHGVGARGKAVGRRVTGCGAGSLVA 558
            MNRFPGKMPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDDHGELKFTDSMSSFFHLHDNDDLICGTARKVRDRIVKPGALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLPKEGKMRPLPRPTPTAAPAPAAAALRGAAGGLEQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSLSSSTGTSRNNAQEWEPLGSAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGSSSSPTSSGPPPPPSLLSLTNNSCVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEYHGVGARGKAVGRRVTGCGAGSLVA
Sbjct:    1 MNRFPGKMPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDDHGELKFTDSMSSFFHLHDNDDLICGTARKVRDRIVKPGALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLPKEGKMRPLPRPTPTAAPAPAAAALRGAAGGLEQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSLSSSTGTSRNNAQEWEPLGSAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGSSSSPTSSGPPPPPSLLSLTNNSCVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEYHGVGARGKAVGRRVTGCGAGSLVA 558          
BLAST of EWM24048.1 vs. NCBI_GenBank
Match: gi|553185612|ref|XP_005854276.1| (epsilon tubulin [Nannochloropsis gaditana CCMP526] >gi|422294781|gb|EKU22081.1| epsilon tubulin [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1133.63 bits (2931), Expect = 0.000e+0
Identity = 551/551 (100.00%), Postives = 551/551 (100.00%), Query Frame = 0
Query:    8 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDDHGELKFTDSMSSFFHLHDNDDLICGTARKVRDRIVKPGALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLPKEGKMRPLPRPTPTAAPAPAAAALRGAAGGLEQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSLSSSTGTSRNNAQEWEPLGSAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGSSSSPTSSGPPPPPSLLSLTNNSCVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEYHGVGARGKAVGRRVTGCGAGSLVA 558
            MPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDDHGELKFTDSMSSFFHLHDNDDLICGTARKVRDRIVKPGALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLPKEGKMRPLPRPTPTAAPAPAAAALRGAAGGLEQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSLSSSTGTSRNNAQEWEPLGSAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGSSSSPTSSGPPPPPSLLSLTNNSCVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEYHGVGARGKAVGRRVTGCGAGSLVA
Sbjct:    1 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDDHGELKFTDSMSSFFHLHDNDDLICGTARKVRDRIVKPGALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLPKEGKMRPLPRPTPTAAPAPAAAALRGAAGGLEQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSLSSSTGTSRNNAQEWEPLGSAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGSSSSPTSSGPPPPPSLLSLTNNSCVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEYHGVGARGKAVGRRVTGCGAGSLVA 551          
BLAST of EWM24048.1 vs. NCBI_GenBank
Match: gi|1214704717|gb|OWZ16528.1| (Tubulin/FtsZ family protein [Phytophthora megakarya])

HSP 1 Score: 448.358 bits (1152), Expect = 2.392e-149
Identity = 262/541 (48.43%), Postives = 327/541 (60.44%), Query Frame = 0
Query:    8 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDDHGELKFTDSMSSFFHLHDNDDLICGTARKVRDRIVKP------------GALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLPKEGKMRPLPRPTPTAAPAPAAAALRGAAGGLEQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSLSSSTGTSRNNAQEWEPLGSAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGSSSSPTSSGPP--PPPSLLSLTNNSCVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEY 534
            MPRE+ITLQVGQ GNQIGR+FW+ ALEEH +           F +SMSSFF             R V  R   P             +LKARA+LVDME+GPV ETL GPL GLFD  Q LTDVSG+GNN+AHGH  YGPQY   + + VR A ELCDSLQSFF+MHS+GGGTGSGLGTYIL LLED +P V+RF T +FPSEDDDVVTSPYNS+LAL++LT HADCVLP+EN++LM L A    + R G                          K GK                   L+  + G    A++    F+ MN++VARLL +LT+SMRF G LNVDLNEITTNLVP+PRLH+L+SS+S   +T   R   +               L QI +  F ++ QL+RA+PR    LAC LL RG  + ++D+  N+++LQ E+ M  WN++GFK+G+C           S PP     SLL L+NNSC+  TF RL  RF KLY R+A +HHY E+MD  +L+EA+E+ R LI EY
Sbjct:    1 MPRELITLQVGQCGNQIGRQFWQLALEEHARYST-----RAVFDESMSSFF-------------RNVDTRYSSPVDLPFANGEAPIKSLKARAILVDMEQGPVAETLAGPLGGLFDQQQLLTDVSGSGNNWAHGHCVYGPQYRTQLEDKVRHAVELCDSLQSFFVMHSMGGGTGSGLGTYILGLLEDQYPDVYRFATVVFPSEDDDVVTSPYNSILALRELTEHADCVLPIENEALMGLTAR---IDRGGKGRVDLRELEQ-------------FYKRGK------------------GLQKQSKGKSGTAQKKTSAFEEMNNIVARLLTNLTSSMRFEGSLNVDLNEITTNLVPFPRLHFLLSSMSPLGATSDPRQQPRR--------------LNQIFADAFHKDYQLIRANPRASVYLACGLLMRGN-VEVSDINVNIQRLQSEVRMIHWNQEGFKVGVC-----------SVPPVGQKSSLLCLSNNSCIRETFERLNTRFHKLYSRKAHMHHYTEFMDAGMLDEAQENARYLIGEY 463          
BLAST of EWM24048.1 vs. NCBI_GenBank
Match: gi|675214253|ref|XP_008916011.1| (hypothetical protein PPTG_19363 [Phytophthora parasitica INRA-310] >gi|568083705|gb|ETM98667.1| hypothetical protein PPTG_19363 [Phytophthora parasitica INRA-310] >gi|970642582|gb|KUF84210.1| Tubulin epsilon chain [Phytophthora nicotianae])

HSP 1 Score: 447.203 bits (1149), Expect = 6.561e-149
Identity = 263/568 (46.30%), Postives = 346/568 (60.92%), Query Frame = 0
Query:    8 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDDHGELKFTDSMSSFFHLHDNDDLICGTARKVRDRIVKP------------GALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLP------KEGKM------RPLPRPTPTAAPAPAAAALRGAAGGLEQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSLSSSTGTSRNNAQEWEPLGSAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGSSSSPTSSGPP--PPPSLLSLTNNSCVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEYHGVGARGKAVGRRVT 549
            MPRE+ITLQVGQ GNQIGR+FW+ ALEEH Q     +    +F +SMSSFF             R V  R   P             +LKARA+LVDME+GPV ET+ GPL  LFD  Q LTDVSG+GNN+AHGH  YGP+Y E + + + +A ELCDSLQSFF+MHS+GGGTGSGLGTYIL LLED +P V+RF T +FPSEDDDVVTSPYNS+LAL++LT HADCVLP+EN++LM L A     T +  T++   +  T     +     V L       K GK+      +P+ R   TA P                +A++ A  F  MN++VA LL +LT+SMRF G LNVDLNEITTNLVP+P+LH+L+SS+S   +T   R   +               L Q+ ++ F +++QL+RA+PR    LAC LL RG  + ++D+  N++++Q E+ M  WN++GFK+G+C           S PP     SLL L+NN C+  TF RL  RF KLY R+A +HHY E+MD  +L+EA+E+ R LI EY  +    +A    +T
Sbjct:    1 MPRELITLQVGQCGNQIGRQFWQLALEEHAQ-----NCKRAEFDESMSSFF-------------RNVDCRFSPPVDLPFDGGQSPIKSLKARAILVDMEQGPVAETMTGPLGELFDQQQLLTDVSGSGNNWAHGHCLYGPKYREQLEDKLHRAVELCDSLQSFFVMHSMGGGTGSGLGTYILGLLEDQYPDVYRFATVVFPSEDDDVVTSPYNSMLALRELTEHADCVLPIENEALMGLCAKIDRGTAAAGTLSANEKQFTRVMGGSRLTDSVDLRELEYFYKSGKVLQTTATQPIKRKNTTARP----------------SAQKKASAFGEMNNIVAHLLTNLTSSMRFQGSLNVDLNEITTNLVPFPKLHFLLSSMSPVFATSDPRQQPR--------------RLNQMFTEAFQKDHQLIRANPRASVYLACGLLMRGN-VEVSDINSNIQRMQSEVRMIHWNQEGFKVGIC-----------SVPPVGQKSSLLCLSNNCCIRETFERLNTRFHKLYSRKAHMHHYTEFMDADILDEAQENARFLIGEYANLERASEATQPAIT 508          
BLAST of EWM24048.1 vs. NCBI_GenBank
Match: gi|695412693|ref|XP_009525802.1| (hypothetical protein PHYSODRAFT_500449 [Phytophthora sojae] >gi|348676927|gb|EGZ16744.1| hypothetical protein PHYSODRAFT_500449 [Phytophthora sojae])

HSP 1 Score: 443.351 bits (1139), Expect = 8.478e-148
Identity = 263/550 (47.82%), Postives = 338/550 (61.45%), Query Frame = 0
Query:    8 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDDHGELKFTDSMSSFFHLHDND-----DLICGTARK-VRDRIVKPGALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLPKEGKMRPLPRPTPTAAPAPAAAALRGAAGGLEQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSLSSSTGTSRNNAQEWEPLGSAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGSSSSPTSSGPP--PPPSLLSLTNNSCVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEYHGVGARGKAVGRRVT 549
            MPRE+ITLQVGQ GNQIGR+FW+ ALEEH Q           F +SMSSFF   D       DL     R  +R       +LKARA+LVDME+GPV ET+ GPL  LFD  Q LTDVSG+GNN+AHGH  YGP+Y E + + + QA ELCDSLQSFF+MHS+GGGTGSGLGTYIL LLED +P V+RF T +FPSEDDDVVTSPYNS+LAL++LT HADCVLP+EN++LM + A     T S + ++GF    +  R++       G+     +R L                                 F  MN++VARLL +LT+SMRF G LNVDLNEITTNLVP+P+LH+L+SS+S   +T   R   +               L Q+ S+ F R++QL+RA+PR    LAC LL RG  + ++D+  N+++LQ E+ M  WN++GFK+G+C           S PP     SLL L+NN C+  TF RL  RF KLY RRA +HHY E+MDV +L+EA+E+ R LI EY  + +   A    +T
Sbjct:    1 MPRELITLQVGQCGNQIGRQFWQLALEEHAQHSR-----RAVFDESMSSFFRNVDARASPPMDLPFNAGRSAIR-------SLKARAILVDMEQGPVAETMAGPLGELFDQQQLLTDVSGSGNNWAHGHCVYGPKYDEQLQDKLHQAVELCDSLQSFFVMHSMGGGTGSGLGTYILGLLEDQYPDVYRFATVVFPSEDDDVVTSPYNSMLALRELTEHADCVLPIENEALMEMCAKIDRGTASAA-LSGFGSEESAARVVDDSRLTDGV----DLRQLEN------------------------------AFGEMNNIVARLLTNLTSSMRFEGSLNVDLNEITTNLVPFPKLHFLLSSMSPVFATADPRQQPRR--------------LNQMFSEAFQRDHQLIRANPRASVYLACGLLMRGN-VEVSDINANIQRLQSEVRMIHWNQEGFKVGVC-----------SVPPVGQKSSLLCLSNNCCIRETFERLHTRFHKLYSRRAHMHHYTEFMDVGMLDEAQENARYLIGEYAKLESASDATQPTIT 477          
BLAST of EWM24048.1 vs. NCBI_GenBank
Match: gi|953501383|emb|CEG37384.1| (tubulin family [Plasmopara halstedii])

HSP 1 Score: 444.121 bits (1141), Expect = 1.282e-147
Identity = 262/545 (48.07%), Postives = 337/545 (61.83%), Query Frame = 0
Query:    8 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDDHGELKFTDSMSSFFHLHDNDDLICGTARKVRDRIVKP------------GALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLPKEGKMRPLPRPTPTAAPAPAAAALRGAAGGLEQAAERP----ACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSLSSSTGTSRNNAQEWEPLGSAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGSSSSPTSSGPP--PPPSLLSLTNNSCVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEY 534
            MPRE+ITLQVGQ GNQIGR+FW+ ALEEH Q    +  G + F +SMSSFF             R V  R   P             +LKARA+LVDME+GPV ET+ GPL  LFD  Q +TDVSG+GNN+AHGH  YGP+Y E + + +R A ELCDSLQSFF+MHS+GGGTGSGLGTYIL LLED +P V+RF T +FPSEDDDVVTSPYNS+LAL +LT HADCVLP+EN++L+ L A    + R  S+VA  +  ST D L         L     M  L            ++ L       ++   RP       F+ MN++VARLL +LT+SMRF G LNVDLN+ITTNLVP+P+LH+L++S+S +  T   R   +               L Q+ S  F +++QL+RA+PR    LAC L  RG  + ++D+  N+++LQ E+ M  WN++GFK+G+C+            PP     SLL L+NN C+  TF RL  RFQKLY RRA VHHY EYMD+  L+EA+E++  LI EY
Sbjct:    1 MPRELITLQVGQCGNQIGRQFWQLALEEHAQ----NCKGSV-FDESMSSFF-------------RNVDSRFSPPVDMPFNDGQSLIKSLKARAILVDMEQGPVAETMIGPLGELFDQQQLVTDVSGSGNNWAHGHCLYGPKYKEQLEDKLRCAVELCDSLQSFFVMHSMGGGTGSGLGTYILGLLEDLYPNVYRFATVVFPSEDDDVVTSPYNSMLALNELTQHADCVLPIENEALIDLCAK---IGRGMSSVARMNTLSTGDNLSTRVINGSRLNDSIDMSKLEH---FYKKGKGSSTLSTRQVRKKKVMIRPDTQKKSAFEEMNNVVARLLTNLTSSMRFPGSLNVDLNDITTNLVPFPKLHFLLASMSPAFDTSDPRQQPRR--------------LFQMFSDAFQKDHQLIRANPRASVYLACGLFMRGG-VEISDINANIQRLQSELRMIHWNQEGFKVGICRV-----------PPVGQKSSLLCLSNNCCIRETFQRLNTRFQKLYSRRAHVHHYTEYMDIAKLDEAQENVMYLIGEY 495          
BLAST of EWM24048.1 vs. NCBI_GenBank
Match: gi|301092452|ref|XP_002997082.1| (tubulin/FtsZ family protein, putative [Phytophthora infestans T30-4] >gi|262112096|gb|EEY70148.1| tubulin/FtsZ family protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 442.195 bits (1136), Expect = 6.455e-147
Identity = 263/565 (46.55%), Postives = 344/565 (60.88%), Query Frame = 0
Query:    8 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDDHGELKFTDSMSSFFHLHDNDDLICGTARKVRDRIVKP------------GALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPC--------PPVGLPKEGKMRPLPRPTPTAAPAPAAAALRGAAGGLEQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSLSSSTGTSRNNAQEWEPLGSAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGSSSSPTSSGPPPPP--SLLSLTNNSCVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEYHGVGARGKAVGRRVTG 550
            MPRE+ITLQVGQ GNQIGR+FW+ ALEEH Q     +    +F +SMS+FF             R V  R   P             +LKARA+LVDME+GPVTET+ GPL  LFD  Q LTDVSG+GNN+AHGH  YGP+Y E + + + +AAELCDSLQSFF+MHS+GGGTGSGLGT+IL LLED +P V+RF T +FPSEDDD+VTSPYNS+LAL++LT HADCVLP+EN++LM L A       S  T +   +  T  RL+   C            L K GK     RP+ T+        +   +     +A++    F  MN+ VARLL +LT+SMRF G LNVDLNEITTNLVP+P+LH+L+SS+S   +T   R   +               L Q+ ++ F +++QL+RA+PR    LAC LL RG  + ++D+  N+++L  E+ M  WN++GFK+G+C           S PP     SLL L+NN C+  TF RL  RF KLY R+A VHHY E+MD  +L EA+E+ R LI EY  +    +A    +T 
Sbjct:    1 MPRELITLQVGQCGNQIGRQFWQLALEEHAQ-----NCKRAEFDESMSTFF-------------RNVDSRFWPPVDLPFIDGQSPIKSLKARAILVDMEQGPVTETIAGPLGELFDQQQLLTDVSGSGNNWAHGHCLYGPKYREQLEDKLHRAAELCDSLQSFFVMHSMGGGTGSGLGTFILGLLEDQYPDVYRFATVVFPSEDDDIVTSPYNSMLALRELTEHADCVLPIENEALMDLCAKIDRGALSTGTFSTDEKQFT--RLVDGSCLTGCVDLSELEYLYKRGK-----RPSTTSTKQNKRKGVTARS-----SAQKKTHVFGEMNNTVARLLTNLTSSMRFEGSLNVDLNEITTNLVPFPKLHFLLSSMSPVFATSDPRQQPRR--------------LNQMFTEAFQKDHQLIRANPRASVYLACGLLMRGN-VEVSDINSNIQRLHSEVRMIHWNQEGFKVGVC-----------SVPPVGQRLSLLCLSNNCCIRETFERLNTRFHKLYSRKAHVHHYTEFMDAGMLNEAQENARFLIGEYAKLERASEATQPTITA 509          
BLAST of EWM24048.1 vs. NCBI_GenBank
Match: gi|673029072|ref|XP_008868497.1| (hypothetical protein H310_05537 [Aphanomyces invadans] >gi|574476114|gb|ETW03113.1| hypothetical protein H310_05537 [Aphanomyces invadans])

HSP 1 Score: 434.876 bits (1117), Expect = 3.059e-145
Identity = 249/530 (46.98%), Postives = 322/530 (60.75%), Query Frame = 0
Query:    8 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDDHGELKFTDSMSSFFHLHDNDDLICGTARKVRDRIVKPGALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLPKEGKMRPLPRPTPTAAPAPAAAALRGAAGGLEQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSLSSSTGTSRNNAQEWEPLGSAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGSSSSPTSSGPPPPPSLLSLTNNSCVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEYHGV 537
            MPRE+IT+QVGQ GNQIGR+FW+ AL+EH    +D       F +SMS+FF   D      G    V + I    +L+ARA+LVDMEEGPV+ETL+GPL  LFDS Q +TDVSG+GNN+AHGH  YGPQY E +LE +R A ELCDSLQSFF++HS+GGGTGSGLGTYIL LLED +P   RF TAIFPS DDDV+TSPYNS+LAL++LT HADCVLP+EN++L  +                                            L +  P +AP   A                    FD MN +VAR L  LT+SMRF G LNVDLNEITTNLVP+P+LHYL+SS++                PL   +    ++  Q+    F R+ QL++ +P+ G++LAC LL RG  + ++D+  N++++Q E+ M  WN DGFK+GLC                P SLL+L+NNSC+  TF R+  RFQKL++R+A VHHY +YMD +L +EA E+ R LI EYH +
Sbjct:    1 MPRELITIQVGQCGNQIGRQFWKMALDEHAHHAKD-----ATFDESMSTFFRNVDKQ----GHELPVHEAI---ASLRARAILVDMEEGPVSETLKGPLGELFDSSQFVTDVSGSGNNWAHGHAMYGPQYKEQLLEKLRHATELCDSLQSFFVLHSMGGGTGSGLGTYILGLLEDHYPDAFRFTTAIFPSADDDVITSPYNSMLALRELTDHADCVLPIENEALYDM--------------------------------------------LEKQPPQSAPKETA--------------------FDKMNAIVARTLTHLTSSMRFDGSLNVDLNEITTNLVPFPKLHYLLSSVA----------------PLWPDKLPRRVN--QMFVDAFQRDYQLIKTNPKGGTMLACGLLLRGN-VQVSDIQANIQRIQSELRMIPWNVDGFKVGLCSVPALGH---------PVSLLTLSNNSCIVDTFERMQMRFQKLFKRKAHVHHYLDYMDASLFDEALENARWLIGEYHKL 426          
BLAST of EWM24048.1 vs. NCBI_GenBank
Match: gi|698805584|ref|XP_009835821.1| (hypothetical protein H257_10834, partial [Aphanomyces astaci] >gi|574109230|gb|ETV74734.1| hypothetical protein H257_10834, partial [Aphanomyces astaci])

HSP 1 Score: 434.491 bits (1116), Expect = 5.554e-145
Identity = 249/527 (47.25%), Postives = 322/527 (61.10%), Query Frame = 0
Query:    8 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDDHGELKFTDSMSSFFHLHDNDDLICGTARKVRDRIVKPGALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLPKEGKMRPLPRPTPTAAPAPAAAALRGAAGGLEQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSLSSSTGTSRNNAQEWEPLGSAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGSSSSPTSSGPPPPPSLLSLTNNSCVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEY 534
            MPRE+IT+QVGQ GNQIGR+FW+ AL+EH    ++       F +SMS+FF   D      G    +   I    +L+ARA+LVDMEEGPV+ETL+GPL  LFDS Q LTDVSG+GNN+AHGH  YGPQY E +LE +R A ELCDSLQSFF+MHS+GGGTGSGLGTYIL LLED +P+  RF TAIFPS DDDV+TSPYNS+LAL++LT HADCVLP+EN++L  +                                   L K+             A  P AAA R                FD MN +VAR L  LT+SMRF G LNVDLNEITTNLVP+P+LHYL+SS++                PL + +      + Q+ S  F R++QL++ +P+ G +LAC LL RG  + ++D+  N+++L+ E+ M  WN+DGFK+GLC                P SLLSL+NNSC+  TF R+  RF KLY+R+A VHHY  YMD +  ++A E+++ L+ EY
Sbjct:    1 MPRELITIQVGQCGNQIGRQFWKMALDEHAHHAKN-----ATFDESMSTFFRNVDKR----GHELPLHKSIT---SLRARAILVDMEEGPVSETLKGPLGELFDSSQFLTDVSGSGNNWAHGHAMYGPQYKEQLLEKLRHATELCDSLQSFFVMHSMGGGTGSGLGTYILGLLEDHYPEAFRFTTAIFPSADDDVITSPYNSMLALRELTLHADCVLPIENEALYDM-----------------------------------LEKQ-------------ASQPGAAATRPKES-----------AFDQMNSIVARTLTHLTSSMRFDGSLNVDLNEITTNLVPFPKLHYLLSSVA----------------PLWADKVMQPRRISQMFSDAFQRDHQLIKTNPKGGIMLACGLLLRGN-VQVSDIQANIQRLRAELRMIPWNEDGFKVGLCSVPALGH---------PVSLLSLSNNSCIVDTFERMHTRFLKLYKRKAHVHHYLAYMDTSAFDDAVENVQWLVAEY 430          
BLAST of EWM24048.1 vs. NCBI_GenBank
Match: gi|971513022|dbj|GAQ85193.1| (Epsilon tubulin [Klebsormidium nitens])

HSP 1 Score: 410.609 bits (1054), Expect = 4.955e-134
Identity = 249/534 (46.63%), Postives = 315/534 (58.99%), Query Frame = 0
Query:    8 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDDHGELKFTDSMSSFFHLHDN-----DDLICGTARKVRDRIVKPGALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLPKEGKMRPLPRPTPTAAPAPAAAALRGAAGGLEQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSLSSSTGTSRNNAQEWEPLGSAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGSSSSPTSSGPPP--PPSLLSLTNNSCVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEY 534
            MPRE++T+QVGQ GNQIG RFWE AL EH   +        +F D++SSFF   D+      +L  G A K          LKARAVLVDMEEG V E L+GPL  +FDS   +TDVSGAGNN+AHGH  YGPQY ES+ E++R A E CDSLQSFFL+HSLGGGTGSGLGTYIL  L D++P+V RF T+IFPS DDDVVTSPYNS+L++  L+  ADCVLP+ENQ+L  L                    S +D                           A+   A +A+ G  G       +P   FD MN + A LLL LT+S+RF G LNVDLNEITTNLVPYPRLH+LMSS++  ++         E   LG           Q+ ++VF+RE QL++A P   + LACAL+ RGQ  +++D+T NV++++  + M  WN +GFKIGLC           S PP   P SLL L NN C+  +   +  RF KLY+RR  VHHY EYMD  + + + E L  L+ EY
Sbjct:    1 MPREIVTIQVGQCGNQIGCRFWELALREHAAYNR-----AARFDDALSSFFRNVDSRHDPPQELPVGGAIK---------TLKARAVLVDMEEGVVNELLKGPLADIFDSKLHITDVSGAGNNWAHGHQVYGPQYRESIFESIRIAVEPCDSLQSFFLLHSLGGGTGSGLGTYILEQLHDEYPEVFRFTTSIFPSADDDVVTSPYNSLLSVASLSEFADCVLPIENQALQDLV-------------------SVVD--------------------------AASGKKAGSAVTGTRGS------KP---FDSMNGIAANLLLHLTSSVRFQGPLNVDLNEITTNLVPYPRLHFLMSSMAPIAAPADVGKMTLEPRALG-----------QVFTEVFSRERQLMKAHPGGSTYLACALMLRGQGCTVSDITRNVERIKPRVKMVYWNTEGFKIGLC-----------STPPVGLPYSLLCLANNCCIGQSIGAIKDRFMKLYKRRTYVHHYTEYMDQGVFDTSAEQLHNLVSEY 444          
The following BLAST results are available for this feature:
BLAST of EWM24048.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105339|gb|EWM24048.1|0.000e+0100.00epsilon 1 [Nannochloropsis gaditana][more]
gi|553185612|ref|XP_005854276.1|0.000e+0100.00epsilon tubulin [Nannochloropsis gaditana CCMP526]... [more]
gi|1214704717|gb|OWZ16528.1|2.392e-14948.43Tubulin/FtsZ family protein [Phytophthora megakary... [more]
gi|675214253|ref|XP_008916011.1|6.561e-14946.30hypothetical protein PPTG_19363 [Phytophthora para... [more]
gi|695412693|ref|XP_009525802.1|8.478e-14847.82hypothetical protein PHYSODRAFT_500449 [Phytophtho... [more]
gi|953501383|emb|CEG37384.1|1.282e-14748.07tubulin family [Plasmopara halstedii][more]
gi|301092452|ref|XP_002997082.1|6.455e-14746.55tubulin/FtsZ family protein, putative [Phytophthor... [more]
gi|673029072|ref|XP_008868497.1|3.059e-14546.98hypothetical protein H310_05537 [Aphanomyces invad... [more]
gi|698805584|ref|XP_009835821.1|5.554e-14547.25hypothetical protein H257_10834, partial [Aphanomy... [more]
gi|971513022|dbj|GAQ85193.1|4.955e-13446.63Epsilon tubulin [Klebsormidium nitens][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6646rna6646Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications